RNA–Protein interactions for RNA: ENST00000303383.7

SHCBP1-201, Transcript of SHC binding and spindle associated 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHCBP1, Length 3,461 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-201ENST00000303383 UBL7Q96S82 380 aaPredicted RBP13.02□□□□□ -0.32
SHCBP1-201ENST00000303383 EMC6Q9BV81 110 aa13.02□□□□□ -0.32
SHCBP1-201ENST00000303383 FAM117AQ9C073 453 aa13.02□□□□□ -0.32
SHCBP1-201ENST00000303383 ZNF593O00488 134 aaPredicted RBP13.02□□□□□ -0.33
SHCBP1-201ENST00000303383 CTDSP2O14595 271 aa13.02□□□□□ -0.33
SHCBP1-201ENST00000303383 TIGD4Q8IY51 512 aa13.02□□□□□ -0.33
SHCBP1-201ENST00000303383 ARMC10Q8N2F6 343 aa13.02□□□□□ -0.33
SHCBP1-201ENST00000303383 PRSS33Q8NF86 280 aa13.02□□□□□ -0.33
SHCBP1-201ENST00000303383 ABHD4Q8TB40 342 aa13.02□□□□□ -0.33
SHCBP1-201ENST00000303383 ASB10Q8WXI3 467 aa13.02□□□□□ -0.33
SHCBP1-201ENST00000303383 UTP23Q9BRU9 249 aaKnown RBP13.02□□□□□ -0.33
SHCBP1-201ENST00000303383 MED18Q9BUE0 208 aa13.02□□□□□ -0.33
SHCBP1-201ENST00000303383 NXF2Q9GZY0 626 aaKnown RBP13.02□□□□□ -0.33
SHCBP1-201ENST00000303383 VSX1Q9NZR4 365 aaPredicted RBP13.02□□□□□ -0.33
SHCBP1-201ENST00000303383 A0A075B6Q4 140 aa13.01□□□□□ -0.33
SHCBP1-201ENST00000303383 OR2M5A3KFT3 312 aa13.01□□□□□ -0.33
SHCBP1-201ENST00000303383 CENPBD1B2RD01 187 aa13.01□□□□□ -0.33
SHCBP1-201ENST00000303383 CTLA4P16410 223 aa13.01□□□□□ -0.33
SHCBP1-201ENST00000303383 GALP22466 123 aa13.01□□□□□ -0.33
SHCBP1-201ENST00000303383 CLRN1P58418 232 aa13.01□□□□□ -0.33
SHCBP1-201ENST00000303383 AIMP2Q13155 320 aaKnown RBP13.01□□□□□ -0.33
SHCBP1-201ENST00000303383 CDK5R1Q15078 307 aa13.01□□□□□ -0.33
SHCBP1-201ENST00000303383 HDDC2Q7Z4H3 204 aa13.01□□□□□ -0.33
SHCBP1-201ENST00000303383 COA3Q9Y2R0 106 aaPredicted RBP13.01□□□□□ -0.33
SHCBP1-201ENST00000303383 hCG_2014768A0A024R1R8 64 aa13.01□□□□□ -0.33
SHCBP1-201ENST00000303383 GJE1A6NN92 205 aa13.01□□□□□ -0.33
SHCBP1-201ENST00000303383 ZNF726A6NNF4 738 aa13.01□□□□□ -0.33
SHCBP1-201ENST00000303383 TGM4P49221 684 aa13.01□□□□□ -0.33
SHCBP1-201ENST00000303383 ZNF45Q02386 682 aa13.01□□□□□ -0.33
SHCBP1-201ENST00000303383 C19orf57Q0VDD7 668 aa13.01□□□□□ -0.33
SHCBP1-201ENST00000303383 CCDC58Q4VC31 144 aa13.01□□□□□ -0.33
SHCBP1-201ENST00000303383 ACSM3Q53FZ2 586 aa13.01□□□□□ -0.33
SHCBP1-201ENST00000303383 H3F3CQ6NXT2 135 aa13.01□□□□□ -0.33
SHCBP1-201ENST00000303383 PAMR1Q6UXH9 720 aa13.01□□□□□ -0.33
SHCBP1-201ENST00000303383 TMPPEQ6ZT21 453 aa13.01□□□□□ -0.33
SHCBP1-201ENST00000303383 TMPRSS12Q86WS5 348 aa13.01□□□□□ -0.33
SHCBP1-201ENST00000303383 NSMAFQ92636 917 aa13.01□□□□□ -0.33
SHCBP1-201ENST00000303383 NKD1Q969G9 470 aa13.01□□□□□ -0.33
SHCBP1-201ENST00000303383 SMIM19Q96E16 107 aa13.01□□□□□ -0.33
SHCBP1-201ENST00000303383 TXNDC15Q96J42 360 aa13.01□□□□□ -0.33
SHCBP1-201ENST00000303383 DCLRE1CQ96SD1 692 aaKnown RBP13.01□□□□□ -0.33
SHCBP1-201ENST00000303383 GTF2A1LQ9UNN4 478 aa13.01□□□□□ -0.33
SHCBP1-201ENST00000303383 SEC14L5O43304 696 aa13.01□□□□□ -0.33
SHCBP1-201ENST00000303383 CAV3P56539 151 aa13.01□□□□□ -0.33
SHCBP1-201ENST00000303383 OTPQ5XKR4 325 aa13.01□□□□□ -0.33
SHCBP1-201ENST00000303383 DMKNQ6E0U4 476 aaPredicted RBP13.01□□□□□ -0.33
SHCBP1-201ENST00000303383 TUBA3EQ6PEY2 450 aa13.01□□□□□ -0.33
SHCBP1-201ENST00000303383 LINC00696Q6ZRV3 163 aa13.01□□□□□ -0.33
SHCBP1-201ENST00000303383 YRDCQ86U90 279 aaKnown RBP13.01□□□□□ -0.33
SHCBP1-201ENST00000303383 OR10H5Q8NGA6 315 aa13.01□□□□□ -0.33
SHCBP1-201ENST00000303383 TTYH2Q9BSA4 534 aa13.01□□□□□ -0.33
SHCBP1-201ENST00000303383 BARHL1Q9BZE3 327 aa13.01□□□□□ -0.33
SHCBP1-201ENST00000303383 CCDC86Q9H6F5 360 aaKnown RBP13.01□□□□□ -0.33
SHCBP1-201ENST00000303383 PROK2Q9HC23 129 aa13.01□□□□□ -0.33
SHCBP1-201ENST00000303383 SH2D2AQ9NP31 389 aa13.01□□□□□ -0.33
SHCBP1-201ENST00000303383 TAF4O00268 1085 aa13□□□□□ -0.33
SHCBP1-201ENST00000303383 GDF1P27539 372 aa13□□□□□ -0.33
SHCBP1-201ENST00000303383 SHC1P29353 583 aa13□□□□□ -0.33
SHCBP1-201ENST00000303383 PPP5CP53041 499 aa13□□□□□ -0.33
SHCBP1-201ENST00000303383 CSNK2A1P68400 391 aaPredicted RBP13□□□□□ -0.33
SHCBP1-201ENST00000303383 ETFDHQ16134 617 aa13□□□□□ -0.33
SHCBP1-201ENST00000303383 RGS21Q2M5E4 152 aa13□□□□□ -0.33
SHCBP1-201ENST00000303383 DDI2Q5TDH0 399 aa13□□□□□ -0.33
SHCBP1-201ENST00000303383 SLC18B1Q6NT16 456 aa13□□□□□ -0.33
SHCBP1-201ENST00000303383 CDC20BQ86Y33 519 aa13□□□□□ -0.33
SHCBP1-201ENST00000303383 MFSD4AQ8N468 514 aa13□□□□□ -0.33
SHCBP1-201ENST00000303383 BOKQ9UMX3 212 aaPredicted RBP13□□□□□ -0.33
SHCBP1-201ENST00000303383 TRAPPC4Q9Y296 219 aa13□□□□□ -0.33
SHCBP1-201ENST00000303383 CMAHPQ9Y471 501 aa13□□□□□ -0.33
SHCBP1-201ENST00000303383 DOCK10Q96BY6 2186 aa13□□□□□ -0.33
SHCBP1-201ENST00000303383 TLX3O43711 291 aaPredicted RBP13□□□□□ -0.33
SHCBP1-201ENST00000303383 KHDRBS3O75525 346 aaKnown RBP13□□□□□ -0.33
SHCBP1-201ENST00000303383 CD82P27701 267 aa13□□□□□ -0.33
SHCBP1-201ENST00000303383 CARD17Q5XLA6 110 aa13□□□□□ -0.33
SHCBP1-201ENST00000303383 TMEM91Q6ZNR0 172 aa13□□□□□ -0.33
SHCBP1-201ENST00000303383 BTLAQ7Z6A9 289 aa13□□□□□ -0.33
SHCBP1-201ENST00000303383 SFXN2Q96NB2 322 aa13□□□□□ -0.33
SHCBP1-201ENST00000303383 SLC30A2Q9BRI3 323 aa13□□□□□ -0.33
SHCBP1-201ENST00000303383 NAA11Q9BSU3 229 aaPredicted RBP13□□□□□ -0.33
SHCBP1-201ENST00000303383 ABCB10Q9NRK6 738 aa13□□□□□ -0.33
SHCBP1-201ENST00000303383 KCNG2Q9UJ96 466 aa13□□□□□ -0.33
SHCBP1-201ENST00000303383 ING1Q9UK53 422 aaPredicted RBP13□□□□□ -0.33
SHCBP1-201ENST00000303383 TMCC2O75069 709 aa13□□□□□ -0.33
SHCBP1-201ENST00000303383 SRD5A2P31213 254 aa13□□□□□ -0.33
SHCBP1-201ENST00000303383 FMODQ06828 376 aa13□□□□□ -0.33
SHCBP1-201ENST00000303383 CAMK2DQ13557 499 aa13□□□□□ -0.33
SHCBP1-201ENST00000303383 SPINK14Q6IE38 97 aa13□□□□□ -0.33
SHCBP1-201ENST00000303383 MZT2AQ6P582 158 aa13□□□□□ -0.33
SHCBP1-201ENST00000303383 KCTD18Q6PI47 426 aaPredicted RBP13□□□□□ -0.33
SHCBP1-201ENST00000303383 SPATC1Q76KD6 591 aa13□□□□□ -0.33
SHCBP1-201ENST00000303383 KRT77Q7Z794 578 aa13□□□□□ -0.33
SHCBP1-201ENST00000303383 HAVCR2Q8TDQ0 301 aa13□□□□□ -0.33
SHCBP1-201ENST00000303383 MIB2Q96AX9 1013 aa13□□□□□ -0.33
SHCBP1-201ENST00000303383 OXGR1Q96P68 337 aa13□□□□□ -0.33
SHCBP1-201ENST00000303383 PDCD1LG2Q9BQ51 273 aa13□□□□□ -0.33
SHCBP1-201ENST00000303383 MROQ9BYG7 248 aa13□□□□□ -0.33
SHCBP1-201ENST00000303383 B3GNT4Q9C0J1 378 aa13□□□□□ -0.33
SHCBP1-201ENST00000303383 COMMD3Q9UBI1 195 aa13□□□□□ -0.33
SHCBP1-201ENST00000303383 ST6GALNAC2Q9UJ37 374 aa13□□□□□ -0.33
SHCBP1-201ENST00000303383 A0A1W2PNV4 684 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms