RNA–Protein interactions for RNA: ENST00000300302.9

HERPUD1-201, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HERPUD1, Length 1,862 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-201ENST00000300302 SYT14Q8NB59 555 aa14.05□□□□□ -0.16
HERPUD1-201ENST00000300302 OR6N2Q8NGY6 317 aa14.05□□□□□ -0.16
HERPUD1-201ENST00000300302 TBC1D15Q8TC07 691 aa14.05□□□□□ -0.16
HERPUD1-201ENST00000300302 HAS2Q92819 552 aa14.05□□□□□ -0.16
HERPUD1-201ENST00000300302 ADAD1Q96M93 576 aaKnown RBP14.05□□□□□ -0.16
HERPUD1-201ENST00000300302 RBP7Q96R05 134 aa14.05□□□□□ -0.16
HERPUD1-201ENST00000300302 TM9SF2Q99805 663 aa14.05□□□□□ -0.16
HERPUD1-201ENST00000300302 TMED9Q9BVK6 235 aa14.05□□□□□ -0.16
HERPUD1-201ENST00000300302 ZNF703Q9H7S9 590 aaPredicted RBP14.05□□□□□ -0.16
HERPUD1-201ENST00000300302 TXNL4BQ9NX01 149 aaKnown RBP14.05□□□□□ -0.16
HERPUD1-201ENST00000300302 LAMP5Q9UJQ1 280 aa14.05□□□□□ -0.16
HERPUD1-201ENST00000300302 GNG8Q9UK08 70 aa14.05□□□□□ -0.16
HERPUD1-201ENST00000300302 COPS3Q9UNS2 423 aa14.05□□□□□ -0.16
HERPUD1-201ENST00000300302 CNOT1A5YKK6 2376 aaKnown RBP14.04□□□□□ -0.16
HERPUD1-201ENST00000300302 A0A0J9YW62 118 aa14.04□□□□□ -0.16
HERPUD1-201ENST00000300302 TRDV1A0A1B0GX56 115 aa14.04□□□□□ -0.16
HERPUD1-201ENST00000300302 TNFSF11O14788 317 aa14.04□□□□□ -0.16
HERPUD1-201ENST00000300302 PLPP2O43688 288 aa14.04□□□□□ -0.16
HERPUD1-201ENST00000300302 TRAF3IP2O43734 574 aaPredicted RBP14.04□□□□□ -0.16
HERPUD1-201ENST00000300302 IGHG1P01857 330 aa14.04□□□□□ -0.16
HERPUD1-201ENST00000300302 TACSTD2P09758 323 aa14.04□□□□□ -0.16
HERPUD1-201ENST00000300302 GALP22466 123 aa14.04□□□□□ -0.16
HERPUD1-201ENST00000300302 FGF9P31371 208 aaPredicted RBP14.04□□□□□ -0.16
HERPUD1-201ENST00000300302 SOX6P35712 828 aa14.04□□□□□ -0.16
HERPUD1-201ENST00000300302 TRAM1Q15629 374 aa14.04□□□□□ -0.16
HERPUD1-201ENST00000300302 NHLRC1Q6VVB1 395 aa14.04□□□□□ -0.16
HERPUD1-201ENST00000300302 PLEKHG7Q6ZR37 379 aa14.04□□□□□ -0.16
HERPUD1-201ENST00000300302 LINC00299Q6ZSB3 139 aa14.04□□□□□ -0.16
HERPUD1-201ENST00000300302 HAVCR2Q8TDQ0 301 aa14.04□□□□□ -0.16
HERPUD1-201ENST00000300302 SLC25A44Q96H78 314 aaPredicted RBP14.04□□□□□ -0.16
HERPUD1-201ENST00000300302 HES7Q9BYE0 225 aa14.04□□□□□ -0.16
HERPUD1-201ENST00000300302 TTTY10Q9BZA0 68 aa14.04□□□□□ -0.16
HERPUD1-201ENST00000300302 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP14.04□□□□□ -0.162e-8■■■□□ 18.7
HERPUD1-201ENST00000300302 ZNF552Q9H707 407 aaPredicted RBP14.04□□□□□ -0.16
HERPUD1-201ENST00000300302 SIAEQ9HAT2 523 aa14.04□□□□□ -0.16
HERPUD1-201ENST00000300302 CCDC59Q9P031 241 aaKnown RBP14.04□□□□□ -0.16
HERPUD1-201ENST00000300302 FAM186AA6NE01 2351 aa14.04□□□□□ -0.16
HERPUD1-201ENST00000300302 FREM2Q5SZK8 3169 aa14.04□□□□□ -0.16
HERPUD1-201ENST00000300302 ZNF814B7Z6K7 855 aa14.04□□□□□ -0.16
HERPUD1-201ENST00000300302 EIF1AYO14602 144 aaKnown RBP14.04□□□□□ -0.16
HERPUD1-201ENST00000300302 HPNP05981 417 aa14.04□□□□□ -0.16
HERPUD1-201ENST00000300302 POU3F2P20265 443 aaPredicted RBP14.04□□□□□ -0.16
HERPUD1-201ENST00000300302 CLRN1P58418 232 aa14.04□□□□□ -0.16
HERPUD1-201ENST00000300302 RAC3P60763 192 aa14.04□□□□□ -0.16
HERPUD1-201ENST00000300302 FABP5Q01469 135 aa14.04□□□□□ -0.16
HERPUD1-201ENST00000300302 PLGLB1Q02325 96 aa14.04□□□□□ -0.16
HERPUD1-201ENST00000300302 CDC20Q12834 499 aa14.04□□□□□ -0.16
HERPUD1-201ENST00000300302 CCDC58Q4VC31 144 aa14.04□□□□□ -0.16
HERPUD1-201ENST00000300302 THEM4Q5T1C6 240 aa14.04□□□□□ -0.16
HERPUD1-201ENST00000300302 VASNQ6EMK4 673 aa14.04□□□□□ -0.16
HERPUD1-201ENST00000300302 FAM220AQ7Z4H9 259 aa14.04□□□□□ -0.16
HERPUD1-201ENST00000300302 GALNTL5Q7Z4T8 443 aa14.04□□□□□ -0.16
HERPUD1-201ENST00000300302 OR6X1Q8NH79 312 aa14.04□□□□□ -0.16
HERPUD1-201ENST00000300302 FNDC8Q8TC99 324 aa14.04□□□□□ -0.16
HERPUD1-201ENST00000300302 KCTD7Q96MP8 289 aa14.04□□□□□ -0.16
HERPUD1-201ENST00000300302 EMC6Q9BV81 110 aa14.04□□□□□ -0.16
HERPUD1-201ENST00000300302 TTTY12Q9BZ98 90 aa14.04□□□□□ -0.16
HERPUD1-201ENST00000300302 SLIRPQ9GZT3 109 aaKnown RBP14.04□□□□□ -0.16
HERPUD1-201ENST00000300302 ZNF726A6NNF4 738 aa14.03□□□□□ -0.16
HERPUD1-201ENST00000300302 TLX3O43711 291 aaPredicted RBP14.03□□□□□ -0.16
HERPUD1-201ENST00000300302 KHDRBS3O75525 346 aaKnown RBP14.03□□□□□ -0.16
HERPUD1-201ENST00000300302 SDHBP21912 280 aa14.03□□□□□ -0.16
HERPUD1-201ENST00000300302 CD97P48960 835 aa14.03□□□□□ -0.16
HERPUD1-201ENST00000300302 CCL11P51671 97 aa14.03□□□□□ -0.16
HERPUD1-201ENST00000300302 AGFG1P52594 562 aaKnown RBP14.03□□□□□ -0.16
HERPUD1-201ENST00000300302 GFRA1P56159 465 aa14.03□□□□□ -0.16
HERPUD1-201ENST00000300302 CARD18P57730 90 aa14.03□□□□□ -0.16
HERPUD1-201ENST00000300302 POU4F3Q15319 338 aa14.03□□□□□ -0.16
HERPUD1-201ENST00000300302 MOGQ16653 247 aa14.03□□□□□ -0.16
HERPUD1-201ENST00000300302 PDSS1Q5T2R2 415 aa14.03□□□□□ -0.16
HERPUD1-201ENST00000300302 HBMQ6B0K9 141 aa14.03□□□□□ -0.16
HERPUD1-201ENST00000300302 C22orf42Q6IC83 251 aa14.03□□□□□ -0.16
HERPUD1-201ENST00000300302 ARL9Q6T311 187 aa14.03□□□□□ -0.16
HERPUD1-201ENST00000300302 ASB18Q6ZVZ8 466 aa14.03□□□□□ -0.16
HERPUD1-201ENST00000300302 DPY19L4Q7Z388 723 aa14.03□□□□□ -0.16
HERPUD1-201ENST00000300302 SLC39A7Q92504 469 aa14.03□□□□□ -0.16
HERPUD1-201ENST00000300302 PELI1Q96FA3 418 aa14.03□□□□□ -0.16
HERPUD1-201ENST00000300302 TRMT61AQ96FX7 289 aaKnown RBP14.03□□□□□ -0.16
HERPUD1-201ENST00000300302 MRPL13Q9BYD1 178 aaKnown RBP14.03□□□□□ -0.16
HERPUD1-201ENST00000300302 KCNN2Q9H2S1 579 aa14.03□□□□□ -0.16
HERPUD1-201ENST00000300302 KLHL13Q9P2N7 655 aa14.03□□□□□ -0.16
HERPUD1-201ENST00000300302 COA3Q9Y2R0 106 aaPredicted RBP14.03□□□□□ -0.16
HERPUD1-201ENST00000300302 SLC35F4A4IF30 521 aa14.02□□□□□ -0.16
HERPUD1-201ENST00000300302 E9PI62 339 aa14.02□□□□□ -0.16
HERPUD1-201ENST00000300302 NPIPA2E9PIF3 369 aa14.02□□□□□ -0.16
HERPUD1-201ENST00000300302 NPIPA3F8WFD2 350 aa14.02□□□□□ -0.16
HERPUD1-201ENST00000300302 ZNF593O00488 134 aaPredicted RBP14.02□□□□□ -0.16
HERPUD1-201ENST00000300302 KRT8P05787 483 aa14.02□□□□□ -0.16
HERPUD1-201ENST00000300302 NR2C1P13056 603 aa14.02□□□□□ -0.16
HERPUD1-201ENST00000300302 WT1P19544 449 aaPredicted RBP14.02□□□□□ -0.16
HERPUD1-201ENST00000300302 MEOX1P50221 254 aa14.02□□□□□ -0.16
HERPUD1-201ENST00000300302 CLDN20P56880 219 aa14.02□□□□□ -0.16
HERPUD1-201ENST00000300302 SIRPAP78324 504 aa14.02□□□□□ -0.16
HERPUD1-201ENST00000300302 ADAM8P78325 824 aa14.02□□□□□ -0.16
HERPUD1-201ENST00000300302 EGR3Q06889 387 aa14.02□□□□□ -0.16
HERPUD1-201ENST00000300302 MRPL28Q13084 256 aaKnown RBP14.02□□□□□ -0.16
HERPUD1-201ENST00000300302 ETFDHQ16134 617 aa14.02□□□□□ -0.16
HERPUD1-201ENST00000300302 ZNF404Q494X3 552 aa14.02□□□□□ -0.16
HERPUD1-201ENST00000300302 RPL22L1Q6P5R6 122 aaKnown RBP14.02□□□□□ -0.16
HERPUD1-201ENST00000300302 GGNQ86UU5 652 aa14.02□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms