RNA–Protein interactions for RNA: ENST00000299440.5

RAG1-201, Transcript of recombination activating 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAG1, Length 6,564 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAG1-201ENST00000299440 SCN9AQ15858 1988 aa6.51□□□□□ -1.37
RAG1-201ENST00000299440 MYH8P13535 1937 aa6.51□□□□□ -1.37
RAG1-201ENST00000299440 TSPAN11A1L157 253 aa6.51□□□□□ -1.37
RAG1-201ENST00000299440 ANKUB1A6NFN9 424 aa6.51□□□□□ -1.37
RAG1-201ENST00000299440 RNF212BA8MTL3 300 aa6.51□□□□□ -1.37
RAG1-201ENST00000299440 GABRA1P14867 456 aa6.51□□□□□ -1.37
RAG1-201ENST00000299440 F2RP25116 425 aa6.51□□□□□ -1.37
RAG1-201ENST00000299440 ZNF616Q08AN1 781 aa6.51□□□□□ -1.37
RAG1-201ENST00000299440 LRRC10Q5BKY1 277 aa6.51□□□□□ -1.37
RAG1-201ENST00000299440 MOB3BQ86TA1 216 aa6.51□□□□□ -1.37
RAG1-201ENST00000299440 ZNF511Q8NB15 262 aa6.51□□□□□ -1.37
RAG1-201ENST00000299440 SEMA6DQ8NFY4 1073 aa6.51□□□□□ -1.37
RAG1-201ENST00000299440 GINS3Q9BRX5 216 aa6.51□□□□□ -1.37
RAG1-201ENST00000299440 TMA7Q9Y2S6 64 aaKnown RBP6.51□□□□□ -1.37
RAG1-201ENST00000299440 MYH4Q9Y623 1939 aa6.51□□□□□ -1.37
RAG1-201ENST00000299440 CBFA2T3O75081 653 aa6.51□□□□□ -1.37
RAG1-201ENST00000299440 KCNK2O95069 426 aa6.51□□□□□ -1.37
RAG1-201ENST00000299440 IFNA10P01566 189 aa6.51□□□□□ -1.37
RAG1-201ENST00000299440 IFNA7P01567 189 aa6.51□□□□□ -1.37
RAG1-201ENST00000299440 OR8U9P0C7N5 309 aa6.51□□□□□ -1.37
RAG1-201ENST00000299440 ARAFP10398 606 aa6.51□□□□□ -1.37
RAG1-201ENST00000299440 PRF1P14222 555 aa6.51□□□□□ -1.37
RAG1-201ENST00000299440 CD34P28906 385 aa6.51□□□□□ -1.37
RAG1-201ENST00000299440 PPP1CAP62136 330 aa6.51□□□□□ -1.37
RAG1-201ENST00000299440 PMPCAQ10713 525 aa6.51□□□□□ -1.37
RAG1-201ENST00000299440 MSMO1Q15800 293 aa6.51□□□□□ -1.37
RAG1-201ENST00000299440 HEPHL1Q6MZM0 1159 aa6.51□□□□□ -1.37
RAG1-201ENST00000299440 ANKRD37Q7Z713 158 aa6.51□□□□□ -1.37
RAG1-201ENST00000299440 CNTN4Q8IWV2 1026 aa6.51□□□□□ -1.37
RAG1-201ENST00000299440 OR7G2Q8NG99 324 aa6.51□□□□□ -1.37
RAG1-201ENST00000299440 KHSRPQ92945 711 aaKnown RBP eCLIP6.51□□□□□ -1.37
RAG1-201ENST00000299440 NT5C3BQ969T7 300 aa6.51□□□□□ -1.37
RAG1-201ENST00000299440 SGK3Q96BR1 496 aa6.51□□□□□ -1.37
RAG1-201ENST00000299440 SLC35A4Q96G79 324 aa6.51□□□□□ -1.37
RAG1-201ENST00000299440 ANKRD19PQ9H560 264 aa6.51□□□□□ -1.37
RAG1-201ENST00000299440 DDX60Q8IY21 1712 aaKnown RBP6.51□□□□□ -1.37
RAG1-201ENST00000299440 MEIKINA0A087WXM9 373 aa6.51□□□□□ -1.37
RAG1-201ENST00000299440 GABARAPH6UMI1 98 aa6.51□□□□□ -1.37
RAG1-201ENST00000299440 GABARAPO95166 117 aa6.51□□□□□ -1.37
RAG1-201ENST00000299440 MT-ATP6P00846 226 aa6.51□□□□□ -1.37
RAG1-201ENST00000299440 KITLGP21583 273 aa6.51□□□□□ -1.37
RAG1-201ENST00000299440 AKR1D1P51857 326 aa6.51□□□□□ -1.37
RAG1-201ENST00000299440 GRB2P62993 217 aaKnown RBP6.51□□□□□ -1.37
RAG1-201ENST00000299440 MPPED2Q15777 294 aa6.51□□□□□ -1.37
RAG1-201ENST00000299440 SYT14P1Q58G82 188 aa6.51□□□□□ -1.37
RAG1-201ENST00000299440 COX20Q5RI15 118 aa6.51□□□□□ -1.37
RAG1-201ENST00000299440 TMEM215Q68D42 235 aa6.51□□□□□ -1.37
RAG1-201ENST00000299440 C16orf47Q6ZP98 133 aaPredicted RBP6.51□□□□□ -1.37
RAG1-201ENST00000299440 SULF2Q8IWU5 870 aa6.51□□□□□ -1.37
RAG1-201ENST00000299440 CMIPQ8IY22 773 aa6.51□□□□□ -1.37
RAG1-201ENST00000299440 DND1Q8IYX4 353 aaKnown RBP6.51□□□□□ -1.37
RAG1-201ENST00000299440 OR4F15Q8NGB8 312 aa6.51□□□□□ -1.37
RAG1-201ENST00000299440 OR2T27Q8NH04 317 aa6.51□□□□□ -1.37
RAG1-201ENST00000299440 ASB5Q8WWX0 329 aa6.51□□□□□ -1.37
RAG1-201ENST00000299440 ZBTB8AQ96BR9 441 aa6.51□□□□□ -1.37
RAG1-201ENST00000299440 GIMAP5Q96F15 307 aa6.51□□□□□ -1.37
RAG1-201ENST00000299440 STACQ99469 402 aa6.51□□□□□ -1.37
RAG1-201ENST00000299440 SPIN2AQ99865 258 aa6.51□□□□□ -1.37
RAG1-201ENST00000299440 SPIN2BQ9BPZ2 258 aa6.51□□□□□ -1.37
RAG1-201ENST00000299440 MKS1Q9NXB0 559 aa6.51□□□□□ -1.37
RAG1-201ENST00000299440 ETAA1Q9NY74 926 aa6.51□□□□□ -1.37
RAG1-201ENST00000299440 STUB1Q9UNE7 303 aa6.51□□□□□ -1.37
RAG1-201ENST00000299440 MRPS28Q9Y2Q9 187 aaKnown RBP6.51□□□□□ -1.37
RAG1-201ENST00000299440 MRPS18BQ9Y676 258 aaKnown RBP6.51□□□□□ -1.37
RAG1-201ENST00000299440 PKD1L3Q7Z443 1732 aa6.5□□□□□ -1.37
RAG1-201ENST00000299440 TRBV4-1A0A0J9YWV2 114 aa6.5□□□□□ -1.37
RAG1-201ENST00000299440 HMX3A6NHT5 357 aa6.5□□□□□ -1.37
RAG1-201ENST00000299440 IFNA1P01562 189 aa6.5□□□□□ -1.37
RAG1-201ENST00000299440 COX7A1P24310 79 aa6.5□□□□□ -1.37
RAG1-201ENST00000299440 HLA-DMAP28067 261 aa6.5□□□□□ -1.37
RAG1-201ENST00000299440 TGIF1Q15583 401 aa6.5□□□□□ -1.37
RAG1-201ENST00000299440 TCTN1Q2MV58 587 aa6.5□□□□□ -1.37
RAG1-201ENST00000299440 CEACAM16Q2WEN9 425 aa6.5□□□□□ -1.37
RAG1-201ENST00000299440 PFN4Q8NHR9 129 aa6.5□□□□□ -1.37
RAG1-201ENST00000299440 FGGYQ96C11 551 aa6.5□□□□□ -1.37
RAG1-201ENST00000299440 CCDC59Q9P031 241 aaKnown RBP6.5□□□□□ -1.37
RAG1-201ENST00000299440 NTNG1Q9Y2I2 539 aa6.5□□□□□ -1.37
RAG1-201ENST00000299440 RBMX2Q9Y388 322 aaKnown RBP6.5□□□□□ -1.37
RAG1-201ENST00000299440 BHLHE40O14503 412 aa6.5□□□□□ -1.37
RAG1-201ENST00000299440 NXPH3O95157 252 aa6.5□□□□□ -1.37
RAG1-201ENST00000299440 BLVRBP30043 206 aaPredicted RBP6.5□□□□□ -1.37
RAG1-201ENST00000299440 RPS16P62249 146 aaKnown RBP6.5□□□□□ -1.37
RAG1-201ENST00000299440 TUBA3CQ13748 450 aa6.5□□□□□ -1.37
RAG1-201ENST00000299440 GGTLC2Q14390 218 aa6.5□□□□□ -1.37
RAG1-201ENST00000299440 MEP1BQ16820 701 aa6.5□□□□□ -1.37
RAG1-201ENST00000299440 ACSM3Q53FZ2 586 aa6.5□□□□□ -1.37
RAG1-201ENST00000299440 HACD4Q5VWC8 232 aa6.5□□□□□ -1.37
RAG1-201ENST00000299440 L3MBTL4Q8NA19 623 aa6.5□□□□□ -1.37
RAG1-201ENST00000299440 OR6F1Q8NGZ6 308 aa6.5□□□□□ -1.37
RAG1-201ENST00000299440 SYNPRQ8TBG9 265 aa6.5□□□□□ -1.37
RAG1-201ENST00000299440 DPF1Q92782 380 aa6.5□□□□□ -1.37
RAG1-201ENST00000299440 ZFP64Q9NPA5 681 aa6.5□□□□□ -1.37
RAG1-201ENST00000299440 TUBA8Q9NY65 449 aaPredicted RBP6.5□□□□□ -1.37
RAG1-201ENST00000299440 C19orf53Q9UNZ5 99 aaPredicted RBP6.5□□□□□ -1.37
RAG1-201ENST00000299440 BRWD1Q9NSI6 2320 aa6.5□□□□□ -1.37
RAG1-201ENST00000299440 IGHV5-10-1A0A0J9YXX1 117 aa6.5□□□□□ -1.37
RAG1-201ENST00000299440 C21orf140B9A014 251 aa6.5□□□□□ -1.37
RAG1-201ENST00000299440 F5H0A9 414 aaPredicted RBP6.5□□□□□ -1.37
RAG1-201ENST00000299440 ZNF728P0DKX0 622 aa6.5□□□□□ -1.37
RAG1-201ENST00000299440 CPEP16870 476 aa6.5□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms