RNA–Protein interactions for RNA: ENST00000297979.9

C9orf3-202, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 1 (best) BASIC

Gene C9orf3, Length 2,820 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-202ENST00000297979 IFT22Q9H7X7 185 aa12.81□□□□□ -0.36
C9orf3-202ENST00000297979 B3GALT5Q9Y2C3 310 aa12.81□□□□□ -0.36
C9orf3-202ENST00000297979 SPAARA0A1B0GVQ0 90 aa12.81□□□□□ -0.36
C9orf3-202ENST00000297979 E9PI62 339 aa12.81□□□□□ -0.36
C9orf3-202ENST00000297979 IL1AP01583 271 aa12.81□□□□□ -0.36
C9orf3-202ENST00000297979 GALP22466 123 aa12.81□□□□□ -0.36
C9orf3-202ENST00000297979 FKBP2P26885 142 aaKnown RBP12.81□□□□□ -0.36
C9orf3-202ENST00000297979 GPR85P60893 370 aa12.81□□□□□ -0.36
C9orf3-202ENST00000297979 TP53I3Q53FA7 332 aa12.81□□□□□ -0.36
C9orf3-202ENST00000297979 MDGA2Q7Z553 956 aa12.81□□□□□ -0.36
C9orf3-202ENST00000297979 GTPBP8Q8N3Z3 284 aaPredicted RBP12.81□□□□□ -0.36
C9orf3-202ENST00000297979 JSRP1Q96MG2 331 aaPredicted RBP12.81□□□□□ -0.36
C9orf3-202ENST00000297979 C5orf34Q96MH7 638 aa12.81□□□□□ -0.36
C9orf3-202ENST00000297979 NUAK2Q9H093 628 aa12.81□□□□□ -0.36
C9orf3-202ENST00000297979 FAM86C1Q9NVL1 165 aa12.81□□□□□ -0.36
C9orf3-202ENST00000297979 ANKRD10Q9NXR5 420 aa12.81□□□□□ -0.36
C9orf3-202ENST00000297979 VSX1Q9NZR4 365 aaPredicted RBP12.81□□□□□ -0.36
C9orf3-202ENST00000297979 ZNF69Q9UC07 566 aa12.81□□□□□ -0.36
C9orf3-202ENST00000297979 J3QRK9 145 aa12.8□□□□□ -0.36
C9orf3-202ENST00000297979 GABRPO00591 440 aa12.8□□□□□ -0.36
C9orf3-202ENST00000297979 CDRT1O95170 752 aa12.8□□□□□ -0.36
C9orf3-202ENST00000297979 P04436 131 aa12.8□□□□□ -0.36
C9orf3-202ENST00000297979 HLA-DOBP13765 273 aa12.8□□□□□ -0.36
C9orf3-202ENST00000297979 HOXB1P14653 301 aaPredicted RBP12.8□□□□□ -0.36
C9orf3-202ENST00000297979 DPP4P27487 766 aa12.8□□□□□ -0.36
C9orf3-202ENST00000297979 DSCR4P56555 118 aaPredicted RBP12.8□□□□□ -0.36
C9orf3-202ENST00000297979 MELKQ14680 651 aa12.8□□□□□ -0.36
C9orf3-202ENST00000297979 ARL9Q6T311 187 aa12.8□□□□□ -0.36
C9orf3-202ENST00000297979 KDM8Q8N371 416 aa12.8□□□□□ -0.36
C9orf3-202ENST00000297979 THOC3Q96J01 351 aaKnown RBP12.8□□□□□ -0.36
C9orf3-202ENST00000297979 GNRHR2Q96P88 292 aa12.8□□□□□ -0.36
C9orf3-202ENST00000297979 PRRX2Q99811 253 aa12.8□□□□□ -0.36
C9orf3-202ENST00000297979 MED18Q9BUE0 208 aa12.8□□□□□ -0.36
C9orf3-202ENST00000297979 HDHD5Q9BXW7 423 aa12.8□□□□□ -0.36
C9orf3-202ENST00000297979 SNTG1Q9NSN8 517 aa12.8□□□□□ -0.36
C9orf3-202ENST00000297979 FKBP7Q9Y680 259 aa12.8□□□□□ -0.36
C9orf3-202ENST00000297979 A6NIZ1 184 aa12.8□□□□□ -0.36
C9orf3-202ENST00000297979 NPIPB13A6NJU9 1138 aa12.8□□□□□ -0.36
C9orf3-202ENST00000297979 NPIPB4C9JG80 1138 aa12.8□□□□□ -0.36
C9orf3-202ENST00000297979 NPIPA5E9PKD4 350 aa12.8□□□□□ -0.36
C9orf3-202ENST00000297979 PLPP2O43688 288 aa12.8□□□□□ -0.36
C9orf3-202ENST00000297979 AKR7A3O95154 331 aa12.8□□□□□ -0.36
C9orf3-202ENST00000297979 BMP4P12644 408 aa12.8□□□□□ -0.36
C9orf3-202ENST00000297979 DAP3P51398 398 aaKnown RBP12.8□□□□□ -0.36
C9orf3-202ENST00000297979 RORCP51449 518 aa12.8□□□□□ -0.36
C9orf3-202ENST00000297979 RAP1BP61224 184 aa12.8□□□□□ -0.36
C9orf3-202ENST00000297979 RAP1AP62834 184 aa12.8□□□□□ -0.36
C9orf3-202ENST00000297979 PPA1Q15181 289 aa12.8□□□□□ -0.36
C9orf3-202ENST00000297979 TIGD3Q6B0B8 471 aa12.8□□□□□ -0.36
C9orf3-202ENST00000297979 JMJD6Q6NYC1 403 aaPredicted RBP12.8□□□□□ -0.36
C9orf3-202ENST00000297979 TIGD4Q8IY51 512 aa12.8□□□□□ -0.36
C9orf3-202ENST00000297979 MFSD4AQ8N468 514 aa12.8□□□□□ -0.36
C9orf3-202ENST00000297979 ADAMTS17Q8TE56 1095 aa12.8□□□□□ -0.36
C9orf3-202ENST00000297979 PSMF1Q92530 271 aa12.8□□□□□ -0.36
C9orf3-202ENST00000297979 OR5B2Q96R09 309 aa12.8□□□□□ -0.36
C9orf3-202ENST00000297979 DCLRE1CQ96SD1 692 aaKnown RBP12.8□□□□□ -0.36
C9orf3-202ENST00000297979 PALMDQ9NP74 551 aa12.8□□□□□ -0.36
C9orf3-202ENST00000297979 DKKL1Q9UK85 242 aa12.8□□□□□ -0.36
C9orf3-202ENST00000297979 NPIPA1Q9UND3 350 aa12.8□□□□□ -0.36
C9orf3-202ENST00000297979 GTF2A1LQ9UNN4 478 aa12.8□□□□□ -0.36
C9orf3-202ENST00000297979 A0A1W2PNV4 684 aa12.8□□□□□ -0.36
C9orf3-202ENST00000297979 RGS9O75916 674 aaPredicted RBP12.8□□□□□ -0.36
C9orf3-202ENST00000297979 SCGB1D2O95969 90 aa12.8□□□□□ -0.36
C9orf3-202ENST00000297979 HOXC12P31275 282 aa12.8□□□□□ -0.36
C9orf3-202ENST00000297979 GBX2P52951 348 aaPredicted RBP12.8□□□□□ -0.36
C9orf3-202ENST00000297979 C19orf57Q0VDD7 668 aa12.8□□□□□ -0.36
C9orf3-202ENST00000297979 SGCAQ16586 387 aa12.8□□□□□ -0.36
C9orf3-202ENST00000297979 MARCH9Q86YJ5 346 aa12.8□□□□□ -0.36
C9orf3-202ENST00000297979 BEST3Q8N1M1 668 aa12.8□□□□□ -0.36
C9orf3-202ENST00000297979 SYT14Q8NB59 555 aa12.8□□□□□ -0.36
C9orf3-202ENST00000297979 UBL7Q96S82 380 aaPredicted RBP12.8□□□□□ -0.36
C9orf3-202ENST00000297979 SACM1LQ9NTJ5 587 aa12.8□□□□□ -0.36
C9orf3-202ENST00000297979 FAIMQ9NVQ4 179 aa12.8□□□□□ -0.36
C9orf3-202ENST00000297979 GNG8Q9UK08 70 aa12.8□□□□□ -0.36
C9orf3-202ENST00000297979 POLHQ9Y253 713 aa12.8□□□□□ -0.36
C9orf3-202ENST00000297979 MAGEB4O15481 346 aaPredicted RBP12.79□□□□□ -0.36
C9orf3-202ENST00000297979 OPN1LWP04000 364 aa12.79□□□□□ -0.36
C9orf3-202ENST00000297979 HSF1Q00613 529 aa12.79□□□□□ -0.36
C9orf3-202ENST00000297979 POU3F1Q03052 451 aaPredicted RBP12.79□□□□□ -0.36
C9orf3-202ENST00000297979 MXD1Q05195 221 aa12.79□□□□□ -0.36
C9orf3-202ENST00000297979 TRAM1Q15629 374 aa12.79□□□□□ -0.36
C9orf3-202ENST00000297979 AARDQ4LEZ3 155 aa12.79□□□□□ -0.36
C9orf3-202ENST00000297979 FAM205BPQ63HN1 556 aa12.79□□□□□ -0.36
C9orf3-202ENST00000297979 RPTNQ6XPR3 784 aa12.79□□□□□ -0.36
C9orf3-202ENST00000297979 PXKQ7Z7A4 578 aa12.79□□□□□ -0.36
C9orf3-202ENST00000297979 ADPRHL1Q8NDY3 354 aa12.79□□□□□ -0.36
C9orf3-202ENST00000297979 ASB10Q8WXI3 467 aa12.79□□□□□ -0.36
C9orf3-202ENST00000297979 SLC25A46Q96AG3 418 aa12.79□□□□□ -0.36
C9orf3-202ENST00000297979 PELI1Q96FA3 418 aa12.79□□□□□ -0.36
C9orf3-202ENST00000297979 BARHL1Q9BZE3 327 aa12.79□□□□□ -0.36
C9orf3-202ENST00000297979 IL17BQ9UHF5 180 aa12.79□□□□□ -0.36
C9orf3-202ENST00000297979 B9D1Q9UPM9 204 aa12.79□□□□□ -0.36
C9orf3-202ENST00000297979 HDGFL3Q9Y3E1 203 aa12.79□□□□□ -0.36
C9orf3-202ENST00000297979 GRIP1Q9Y3R0 1128 aa12.79□□□□□ -0.36
C9orf3-202ENST00000297979 PEX16Q9Y5Y5 336 aa12.79□□□□□ -0.36
C9orf3-202ENST00000297979 A0A075B6Q4 140 aa12.79□□□□□ -0.36
C9orf3-202ENST00000297979 A0A1W2PNR3 127 aa12.79□□□□□ -0.36
C9orf3-202ENST00000297979 SLC22A23A1A5C7 686 aa12.79□□□□□ -0.36
C9orf3-202ENST00000297979 TVP23AA6NH52 213 aa12.79□□□□□ -0.36
C9orf3-202ENST00000297979 CD8B2A6NJW9 211 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms