RNA–Protein interactions for RNA: ENST00000292478.8

PTCD1-201, Transcript of pentatricopeptide repeat domain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTCD1, Length 5,582 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1-201ENST00000292478 BCDIN3DQ7Z5W3 292 aaKnown RBP11.75□□□□□ -0.53
PTCD1-201ENST00000292478 SUMF2Q8NBJ7 301 aa11.75□□□□□ -0.53
PTCD1-201ENST00000292478 TSSK2Q96PF2 358 aa11.75□□□□□ -0.53
PTCD1-201ENST00000292478 ARPC5LQ9BPX5 153 aa11.75□□□□□ -0.53
PTCD1-201ENST00000292478 FKRPQ9H9S5 495 aa11.75□□□□□ -0.53
PTCD1-201ENST00000292478 B3GAT1Q9P2W7 334 aa11.75□□□□□ -0.53
PTCD1-201ENST00000292478 A0A1B0GV50 99 aa11.75□□□□□ -0.53
PTCD1-201ENST00000292478 TRABD2BA6NFA1 517 aa11.75□□□□□ -0.53
PTCD1-201ENST00000292478 SELENOFO60613 162 aa11.75□□□□□ -0.53
PTCD1-201ENST00000292478 MC2RQ01718 297 aa11.75□□□□□ -0.53
PTCD1-201ENST00000292478 NKAIN1Q4KMZ8 207 aa11.75□□□□□ -0.53
PTCD1-201ENST00000292478 DOK3Q7L591 496 aa11.75□□□□□ -0.53
PTCD1-201ENST00000292478 Q96M85 177 aa11.75□□□□□ -0.53
PTCD1-201ENST00000292478 SEMA4CQ9C0C4 833 aa11.75□□□□□ -0.53
PTCD1-201ENST00000292478 SELENOIQ9C0D9 397 aa11.75□□□□□ -0.53
PTCD1-201ENST00000292478 ATP13A2Q9NQ11 1180 aa11.75□□□□□ -0.53
PTCD1-201ENST00000292478 LIPCP11150 499 aa11.74□□□□□ -0.53
PTCD1-201ENST00000292478 SDHAP31040 664 aa11.74□□□□□ -0.53
PTCD1-201ENST00000292478 RPS18P62269 152 aaKnown RBP11.74□□□□□ -0.53
PTCD1-201ENST00000292478 SLC9A3R2Q15599 337 aa11.74□□□□□ -0.53
PTCD1-201ENST00000292478 CTU2Q2VPK5 515 aaKnown RBP11.74□□□□□ -0.53
PTCD1-201ENST00000292478 PAQR8Q8TEZ7 354 aa11.74□□□□□ -0.53
PTCD1-201ENST00000292478 BORCS7Q96B45 105 aa11.74□□□□□ -0.53
PTCD1-201ENST00000292478 OLFM2O95897 454 aa11.74□□□□□ -0.53
PTCD1-201ENST00000292478 PEX11BO96011 259 aa11.74□□□□□ -0.53
PTCD1-201ENST00000292478 MYOGP15173 224 aa11.74□□□□□ -0.53
PTCD1-201ENST00000292478 DDOSTP39656 456 aa11.74□□□□□ -0.53
PTCD1-201ENST00000292478 HMGN3Q15651 99 aa11.74□□□□□ -0.53
PTCD1-201ENST00000292478 MYEOVQ96EZ4 313 aa11.74□□□□□ -0.53
PTCD1-201ENST00000292478 GALNT9Q9HCQ5 603 aa11.74□□□□□ -0.53
PTCD1-201ENST00000292478 CHST11Q9NPF2 352 aa11.74□□□□□ -0.53
PTCD1-201ENST00000292478 CHRNA9Q9UGM1 479 aa11.74□□□□□ -0.53
PTCD1-201ENST00000292478 EDARQ9UNE0 448 aa11.74□□□□□ -0.53
PTCD1-201ENST00000292478 PPIL1Q9Y3C6 166 aa11.74□□□□□ -0.53
PTCD1-201ENST00000292478 LAMB2P55268 1798 aa11.74□□□□□ -0.53
PTCD1-201ENST00000292478 MSTNO14793 375 aa11.74□□□□□ -0.53
PTCD1-201ENST00000292478 FGF17O60258 216 aa11.74□□□□□ -0.53
PTCD1-201ENST00000292478 SOD1P00441 154 aa11.74□□□□□ -0.53
PTCD1-201ENST00000292478 CLEC2LP0C7M8 214 aa11.74□□□□□ -0.53
PTCD1-201ENST00000292478 S100A7P31151 101 aa11.74□□□□□ -0.53
PTCD1-201ENST00000292478 ETV5P41161 510 aa11.74□□□□□ -0.53
PTCD1-201ENST00000292478 ETV1P50549 477 aa11.74□□□□□ -0.53
PTCD1-201ENST00000292478 GP2P55259 537 aaKnown RBP11.74□□□□□ -0.53
PTCD1-201ENST00000292478 ACSM1Q08AH1 577 aa11.74□□□□□ -0.53
PTCD1-201ENST00000292478 ZNF628Q5EBL2 1059 aa11.74□□□□□ -0.53
PTCD1-201ENST00000292478 DCXRQ7Z4W1 244 aa11.74□□□□□ -0.53
PTCD1-201ENST00000292478 FAM109AQ8N4B1 249 aa11.74□□□□□ -0.53
PTCD1-201ENST00000292478 ST8SIA1Q92185 356 aa11.74□□□□□ -0.53
PTCD1-201ENST00000292478 TAAR8Q969N4 342 aa11.74□□□□□ -0.53
PTCD1-201ENST00000292478 FGGYQ96C11 551 aa11.74□□□□□ -0.53
PTCD1-201ENST00000292478 DCBLD2Q96PD2 775 aa11.74□□□□□ -0.53
PTCD1-201ENST00000292478 RPS10P5Q9NQ39 176 aa11.74□□□□□ -0.53
PTCD1-201ENST00000292478 GABARAPH6UMI1 98 aa11.74□□□□□ -0.53
PTCD1-201ENST00000292478 RFXAPO00287 272 aa11.74□□□□□ -0.53
PTCD1-201ENST00000292478 MSR1P21757 451 aa11.74□□□□□ -0.53
PTCD1-201ENST00000292478 CYB561P49447 251 aa11.74□□□□□ -0.53
PTCD1-201ENST00000292478 DIO1P49895 249 aa11.74□□□□□ -0.53
PTCD1-201ENST00000292478 ASAH1Q13510 395 aa11.74□□□□□ -0.53
PTCD1-201ENST00000292478 CAMK2BQ13554 666 aa11.74□□□□□ -0.53
PTCD1-201ENST00000292478 POC1BQ8TC44 478 aa11.74□□□□□ -0.53
PTCD1-201ENST00000292478 FAM212BQ9NTI7 297 aaPredicted RBP11.74□□□□□ -0.53
PTCD1-201ENST00000292478 PAPPA2Q9BXP8 1791 aa11.74□□□□□ -0.53
PTCD1-201ENST00000292478 CEBPZOSA8MTT3 80 aa11.73□□□□□ -0.53
PTCD1-201ENST00000292478 PRR35P0CG20 571 aa11.73□□□□□ -0.53
PTCD1-201ENST00000292478 PTOV1Q86YD1 416 aa11.73□□□□□ -0.53
PTCD1-201ENST00000292478 NAXDQ8IW45 347 aa11.73□□□□□ -0.53
PTCD1-201ENST00000292478 PRR14Q9BWN1 585 aa11.73□□□□□ -0.53
PTCD1-201ENST00000292478 C20orf85Q9H1P6 137 aa11.73□□□□□ -0.53
PTCD1-201ENST00000292478 MED6O75586 246 aa11.73□□□□□ -0.53
PTCD1-201ENST00000292478 ZNF728P0DKX0 622 aa11.73□□□□□ -0.53
PTCD1-201ENST00000292478 IKZF1Q13422 519 aa11.73□□□□□ -0.53
PTCD1-201ENST00000292478 FAM53BQ14153 422 aa11.73□□□□□ -0.53
PTCD1-201ENST00000292478 TRIM61Q5EBN2 209 aa11.73□□□□□ -0.53
PTCD1-201ENST00000292478 COMTD1Q86VU5 262 aa11.73□□□□□ -0.53
PTCD1-201ENST00000292478 LINC00346Q8IVM7 164 aa11.73□□□□□ -0.53
PTCD1-201ENST00000292478 SVBPQ8N300 66 aa11.73□□□□□ -0.53
PTCD1-201ENST00000292478 STRCQ7RTU9 1775 aa11.73□□□□□ -0.53
PTCD1-201ENST00000292478 KRBOX1C9JBD0 128 aa11.73□□□□□ -0.53
PTCD1-201ENST00000292478 FXYD1O00168 92 aa11.73□□□□□ -0.53
PTCD1-201ENST00000292478 LCMT2O60294 686 aaKnown RBP11.73□□□□□ -0.53
PTCD1-201ENST00000292478 B3GALT4O96024 378 aa11.73□□□□□ -0.53
PTCD1-201ENST00000292478 ABOP16442 354 aa11.73□□□□□ -0.53
PTCD1-201ENST00000292478 SSTR2P30874 369 aa11.73□□□□□ -0.53
PTCD1-201ENST00000292478 TAS2R30P59541 319 aa11.73□□□□□ -0.53
PTCD1-201ENST00000292478 EGR3Q06889 387 aa11.73□□□□□ -0.53
PTCD1-201ENST00000292478 GLYATL3Q5SZD4 288 aa11.73□□□□□ -0.53
PTCD1-201ENST00000292478 ZNF813Q6ZN06 617 aa11.73□□□□□ -0.53
PTCD1-201ENST00000292478 MAML2Q8IZL2 1156 aaPredicted RBP11.73□□□□□ -0.53
PTCD1-201ENST00000292478 TNFRSF12AQ9NP84 129 aa11.73□□□□□ -0.53
PTCD1-201ENST00000292478 TRAPPC2LQ9UL33 140 aa11.73□□□□□ -0.53
PTCD1-201ENST00000292478 SLC17A4Q9Y2C5 497 aa11.73□□□□□ -0.53
PTCD1-201ENST00000292478 A0A1W2PPV4 95 aa11.73□□□□□ -0.53
PTCD1-201ENST00000292478 ANKRD33BA6NCL7 494 aa11.73□□□□□ -0.53
PTCD1-201ENST00000292478 HBE1P02100 147 aa11.73□□□□□ -0.53
PTCD1-201ENST00000292478 CAPZBP47756 277 aa11.73□□□□□ -0.53
PTCD1-201ENST00000292478 ZNF136P52737 540 aa11.73□□□□□ -0.53
PTCD1-201ENST00000292478 SMAD4Q13485 552 aaKnown RBP11.73□□□□□ -0.53
PTCD1-201ENST00000292478 SHHQ15465 462 aa11.73□□□□□ -0.53
PTCD1-201ENST00000292478 CREB3L2Q70SY1 520 aa11.73□□□□□ -0.53
PTCD1-201ENST00000292478 MDGA2Q7Z553 956 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 62.6 ms