RNA–Protein interactions for RNA: ENST00000284770.9

PDLIM3-202, Transcript of PDZ and LIM domain 3, humanhuman

TSL 1 (best) BASIC

Gene PDLIM3, Length 1,766 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-202ENST00000284770 RAB39AQ14964 217 aa16.79■□□□□ 0.28
PDLIM3-202ENST00000284770 SF3B4Q15427 424 aaKnown RBP eCLIP16.79■□□□□ 0.28
PDLIM3-202ENST00000284770 TBCEQ15813 527 aaPredicted RBP16.79■□□□□ 0.28
PDLIM3-202ENST00000284770 KLHL12Q53G59 568 aa16.79■□□□□ 0.28
PDLIM3-202ENST00000284770 KLHL22Q53GT1 634 aa16.79■□□□□ 0.28
PDLIM3-202ENST00000284770 MEPCEQ7L2J0 689 aaKnown RBP16.79■□□□□ 0.28
PDLIM3-202ENST00000284770 SYT14Q8NB59 555 aa16.79■□□□□ 0.28
PDLIM3-202ENST00000284770 OR52I1Q8NGK6 324 aa16.79■□□□□ 0.28
PDLIM3-202ENST00000284770 ZNF775Q96BV0 537 aaPredicted RBP16.79■□□□□ 0.28
PDLIM3-202ENST00000284770 TMEM80Q96HE8 168 aa16.79■□□□□ 0.28
PDLIM3-202ENST00000284770 TRIB1Q96RU8 372 aa16.79■□□□□ 0.28
PDLIM3-202ENST00000284770 ALG12Q9BV10 488 aa16.79■□□□□ 0.28
PDLIM3-202ENST00000284770 ASB6Q9NWX5 421 aa16.79■□□□□ 0.28
PDLIM3-202ENST00000284770 EMC3Q9P0I2 261 aa16.79■□□□□ 0.28
PDLIM3-202ENST00000284770 RCE1Q9Y256 329 aa16.79■□□□□ 0.28
PDLIM3-202ENST00000284770 COMMD3-BMI1R4GMX3 469 aa16.79■□□□□ 0.28
PDLIM3-202ENST00000284770 ITPR1Q14643 2758 aa16.79■□□□□ 0.28
PDLIM3-202ENST00000284770 PRRC2CQ9Y520 2896 aaKnown RBP16.79■□□□□ 0.28
PDLIM3-202ENST00000284770 CCDC182A6NF36 153 aa16.79■□□□□ 0.28
PDLIM3-202ENST00000284770 ZNF724A8MTY0 619 aa16.79■□□□□ 0.28
PDLIM3-202ENST00000284770 CENPBD1B2RD01 187 aa16.79■□□□□ 0.28
PDLIM3-202ENST00000284770 AKAP8O43823 692 aaKnown RBP16.79■□□□□ 0.28
PDLIM3-202ENST00000284770 ZNF432O94892 652 aa16.79■□□□□ 0.28
PDLIM3-202ENST00000284770 GYPBP06028 91 aa16.79■□□□□ 0.28
PDLIM3-202ENST00000284770 SPI1P17947 270 aa16.79■□□□□ 0.28
PDLIM3-202ENST00000284770 ZNF585AQ6P3V2 769 aa16.79■□□□□ 0.28
PDLIM3-202ENST00000284770 MCEMP1Q8IX19 187 aa16.79■□□□□ 0.28
PDLIM3-202ENST00000284770 TSSK2Q96PF2 358 aa16.79■□□□□ 0.28
PDLIM3-202ENST00000284770 OR2M2Q96R28 347 aa16.79■□□□□ 0.28
PDLIM3-202ENST00000284770 TEAD3Q99594 435 aa16.79■□□□□ 0.28
PDLIM3-202ENST00000284770 NUAK2Q9H093 628 aa16.79■□□□□ 0.28
PDLIM3-202ENST00000284770 RBM38Q9H0Z9 239 aaKnown RBP16.79■□□□□ 0.28
PDLIM3-202ENST00000284770 CALHM2Q9HA72 323 aa16.79■□□□□ 0.28
PDLIM3-202ENST00000284770 SRA1Q9HD15 236 aaKnown RBP16.79■□□□□ 0.28
PDLIM3-202ENST00000284770 FGF20Q9NP95 211 aaPredicted RBP16.79■□□□□ 0.28
PDLIM3-202ENST00000284770 DIMT1Q9UNQ2 313 aaKnown RBP16.79■□□□□ 0.28
PDLIM3-202ENST00000284770 SMIM31A0A1B0GVY4 71 aa16.78■□□□□ 0.28
PDLIM3-202ENST00000284770 SLC22A31A6NKX4 558 aa16.78■□□□□ 0.28
PDLIM3-202ENST00000284770 DCTN6O00399 190 aa16.78■□□□□ 0.28
PDLIM3-202ENST00000284770 TPOP07202 933 aa16.78■□□□□ 0.28
PDLIM3-202ENST00000284770 GABRA1P14867 456 aa16.78■□□□□ 0.28
PDLIM3-202ENST00000284770 NTF4P34130 210 aa16.78■□□□□ 0.28
PDLIM3-202ENST00000284770 CLRN1P58418 232 aa16.78■□□□□ 0.28
PDLIM3-202ENST00000284770 LGALS3BPQ08380 585 aa16.78■□□□□ 0.28
PDLIM3-202ENST00000284770 TMED1Q13445 227 aa16.78■□□□□ 0.28
PDLIM3-202ENST00000284770 HIST3H3Q16695 136 aa16.78■□□□□ 0.28
PDLIM3-202ENST00000284770 ACSF3Q4G176 576 aaPredicted RBP16.78■□□□□ 0.28
PDLIM3-202ENST00000284770 RNLSQ5VYX0 342 aa16.78■□□□□ 0.28
PDLIM3-202ENST00000284770 B3GNT6Q6ZMB0 384 aa16.78■□□□□ 0.28
PDLIM3-202ENST00000284770 TUSC5Q8IXB3 177 aa16.78■□□□□ 0.28
PDLIM3-202ENST00000284770 OR6V1Q8N148 313 aa16.78■□□□□ 0.28
PDLIM3-202ENST00000284770 NOXO1Q8NFA2 376 aa16.78■□□□□ 0.28
PDLIM3-202ENST00000284770 OR2T4Q8NH00 348 aa16.78■□□□□ 0.28
PDLIM3-202ENST00000284770 FAM57AQ8TBR7 257 aa16.78■□□□□ 0.28
PDLIM3-202ENST00000284770 TMEM45BQ96B21 275 aa16.78■□□□□ 0.28
PDLIM3-202ENST00000284770 FAM192AQ9GZU8 254 aa16.78■□□□□ 0.28
PDLIM3-202ENST00000284770 GP6Q9HCN6 339 aa16.78■□□□□ 0.28
PDLIM3-202ENST00000284770 TAS2R16Q9NYV7 291 aa16.78■□□□□ 0.28
PDLIM3-202ENST00000284770 WARS2Q9UGM6 360 aaKnown RBP16.78■□□□□ 0.28
PDLIM3-202ENST00000284770 EXOGQ9Y2C4 368 aaKnown RBP16.78■□□□□ 0.28
PDLIM3-202ENST00000284770 FKBP7Q9Y680 259 aa16.78■□□□□ 0.28
PDLIM3-202ENST00000284770 IRGMA1A4Y4 181 aa16.77■□□□□ 0.28
PDLIM3-202ENST00000284770 WDR1O75083 606 aa16.77■□□□□ 0.28
PDLIM3-202ENST00000284770 SEC14L2O76054 403 aa16.77■□□□□ 0.28
PDLIM3-202ENST00000284770 INMTO95050 263 aa16.77■□□□□ 0.28
PDLIM3-202ENST00000284770 YES1P07947 543 aa16.77■□□□□ 0.28
PDLIM3-202ENST00000284770 ABOP16442 354 aa16.77■□□□□ 0.28
PDLIM3-202ENST00000284770 PTGER4P35408 488 aa16.77■□□□□ 0.28
PDLIM3-202ENST00000284770 SELENOPP49908 381 aa16.77■□□□□ 0.28
PDLIM3-202ENST00000284770 RPS7P62081 194 aaKnown RBP16.77■□□□□ 0.28
PDLIM3-202ENST00000284770 SLC35D3Q5M8T2 416 aa16.77■□□□□ 0.28
PDLIM3-202ENST00000284770 THEM4Q5T1C6 240 aa16.77■□□□□ 0.28
PDLIM3-202ENST00000284770 UBE2UQ5VVX9 321 aa16.77■□□□□ 0.28
PDLIM3-202ENST00000284770 CARD17Q5XLA6 110 aa16.77■□□□□ 0.28
PDLIM3-202ENST00000284770 GFRALQ6UXV0 394 aa16.77■□□□□ 0.28
PDLIM3-202ENST00000284770 AAED1Q7RTV5 226 aa16.77■□□□□ 0.28
PDLIM3-202ENST00000284770 P4HA3Q7Z4N8 544 aa16.77■□□□□ 0.28
PDLIM3-202ENST00000284770 GPR141Q7Z602 305 aa16.77■□□□□ 0.28
PDLIM3-202ENST00000284770 ZBTB46Q86UZ6 589 aa16.77■□□□□ 0.28
PDLIM3-202ENST00000284770 TMEM123Q8N131 208 aa16.77■□□□□ 0.28
PDLIM3-202ENST00000284770 OR13F1Q8NGS4 319 aa16.77■□□□□ 0.28
PDLIM3-202ENST00000284770 ZNRF4Q8WWF5 429 aa16.77■□□□□ 0.28
PDLIM3-202ENST00000284770 WNT2BQ93097 391 aa16.77■□□□□ 0.28
PDLIM3-202ENST00000284770 RBP7Q96R05 134 aa16.77■□□□□ 0.28
PDLIM3-202ENST00000284770 NDUFA13Q9P0J0 144 aa16.77■□□□□ 0.28
PDLIM3-202ENST00000284770 MOKQ9UQ07 419 aa16.77■□□□□ 0.28
PDLIM3-202ENST00000284770 CD8B2A6NJW9 211 aa16.77■□□□□ 0.27
PDLIM3-202ENST00000284770 FIGNL2A6NMB9 653 aa16.77■□□□□ 0.27
PDLIM3-202ENST00000284770 ZNF99A8MXY4 864 aaPredicted RBP16.77■□□□□ 0.27
PDLIM3-202ENST00000284770 SLC16A7O60669 478 aa16.77■□□□□ 0.27
PDLIM3-202ENST00000284770 APOL3O95236 402 aa16.77■□□□□ 0.27
PDLIM3-202ENST00000284770 RAB36O95755 333 aa16.77■□□□□ 0.27
PDLIM3-202ENST00000284770 EDN3P14138 238 aa16.77■□□□□ 0.27
PDLIM3-202ENST00000284770 DCKP27707 260 aa16.77■□□□□ 0.27
PDLIM3-202ENST00000284770 CRABP1P29762 137 aa16.77■□□□□ 0.27
PDLIM3-202ENST00000284770 GP2P55259 537 aaKnown RBP16.77■□□□□ 0.27
PDLIM3-202ENST00000284770 NSUN5P2Q63ZY6 315 aa16.77■□□□□ 0.27
PDLIM3-202ENST00000284770 B3GLCTQ6Y288 498 aa16.77■□□□□ 0.27
PDLIM3-202ENST00000284770 CD163Q86VB7 1156 aa16.77■□□□□ 0.27
PDLIM3-202ENST00000284770 OR51L1Q8NGJ5 315 aa16.77■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms