RNA–Protein interactions for RNA: ENST00000284049.7

CHD1-201, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHD1, Length 6,457 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-201ENST00000284049 RAMP2O60895 175 aa2.4□□□□□ -2.03
CHD1-201ENST00000284049 RCBTB2O95199 551 aa2.4□□□□□ -2.03
CHD1-201ENST00000284049 F10P00742 488 aa2.4□□□□□ -2.03
CHD1-201ENST00000284049 MAP3K8P41279 467 aa2.4□□□□□ -2.03
CHD1-201ENST00000284049 RAB25P57735 213 aa2.4□□□□□ -2.03
CHD1-201ENST00000284049 DLG1Q12959 904 aa2.4□□□□□ -2.03
CHD1-201ENST00000284049 PDIA2Q13087 525 aaKnown RBP2.4□□□□□ -2.03
CHD1-201ENST00000284049 ARL6IP1Q15041 203 aa2.4□□□□□ -2.03
CHD1-201ENST00000284049 TRIP13Q15645 432 aaPredicted RBP2.4□□□□□ -2.03
CHD1-201ENST00000284049 ZNF124Q15973 351 aa2.4□□□□□ -2.03
CHD1-201ENST00000284049 CYP51A1Q16850 503 aa2.4□□□□□ -2.03
CHD1-201ENST00000284049 TTMPQ5BVD1 217 aa2.4□□□□□ -2.03
CHD1-201ENST00000284049 TMEM220Q6QAJ8 160 aa2.4□□□□□ -2.03
CHD1-201ENST00000284049 MRPL21Q7Z2W9 205 aaKnown RBP2.4□□□□□ -2.03
CHD1-201ENST00000284049 PQLC3Q8N755 202 aa2.4□□□□□ -2.03
CHD1-201ENST00000284049 FAM86B1Q8N7N1 296 aa2.4□□□□□ -2.03
CHD1-201ENST00000284049 OR1K1Q8NGR3 316 aa2.4□□□□□ -2.03
CHD1-201ENST00000284049 NRGNQ92686 78 aa2.4□□□□□ -2.03
CHD1-201ENST00000284049 ZNF385AQ96PM9 386 aaKnown RBP2.4□□□□□ -2.03
CHD1-201ENST00000284049 ZBTB20Q9HC78 741 aaPredicted RBP2.4□□□□□ -2.03
CHD1-201ENST00000284049 DEPPQ9NTK1 212 aa2.4□□□□□ -2.03
CHD1-201ENST00000284049 CLEC5AQ9NY25 188 aa2.4□□□□□ -2.03
CHD1-201ENST00000284049 C3orf18Q9UK00 162 aa2.4□□□□□ -2.03
CHD1-201ENST00000284049 LOC101059948A0A1B0GTJ6 334 aa2.39□□□□□ -2.03
CHD1-201ENST00000284049 C16orf97H3BN30 126 aa2.39□□□□□ -2.03
CHD1-201ENST00000284049 M0R036 132 aa2.39□□□□□ -2.03
CHD1-201ENST00000284049 BTN3A3O00478 584 aa2.39□□□□□ -2.03
CHD1-201ENST00000284049 SPRY3O43610 288 aa2.39□□□□□ -2.03
CHD1-201ENST00000284049 STK17BO94768 372 aa2.39□□□□□ -2.03
CHD1-201ENST00000284049 RETP07949 1114 aa2.39□□□□□ -2.03
CHD1-201ENST00000284049 SPRP35270 261 aaPredicted RBP2.39□□□□□ -2.03
CHD1-201ENST00000284049 PRELPP51888 382 aa2.39□□□□□ -2.03
CHD1-201ENST00000284049 CLDN15P56746 228 aa2.39□□□□□ -2.03
CHD1-201ENST00000284049 CLDN18P56856 261 aa2.39□□□□□ -2.03
CHD1-201ENST00000284049 SLC35B1P78383 322 aa2.39□□□□□ -2.03
CHD1-201ENST00000284049 FZD5Q13467 585 aa2.39□□□□□ -2.03
CHD1-201ENST00000284049 ZNF266Q14584 549 aa2.39□□□□□ -2.03
CHD1-201ENST00000284049 DUSP6Q16828 381 aa2.39□□□□□ -2.03
CHD1-201ENST00000284049 SLC18B1Q6NT16 456 aa2.39□□□□□ -2.03
CHD1-201ENST00000284049 Q75L30 129 aa2.39□□□□□ -2.03
CHD1-201ENST00000284049 OR7G1Q8NGA0 311 aa2.39□□□□□ -2.03
CHD1-201ENST00000284049 ESR2Q92731 530 aa2.39□□□□□ -2.03
CHD1-201ENST00000284049 WBP2Q969T9 261 aa2.39□□□□□ -2.03
CHD1-201ENST00000284049 CPXM1Q96SM3 734 aa2.39□□□□□ -2.03
CHD1-201ENST00000284049 CYP2S1Q96SQ9 504 aa2.39□□□□□ -2.03
CHD1-201ENST00000284049 SLC35A5Q9BS91 424 aa2.39□□□□□ -2.03
CHD1-201ENST00000284049 TMEM59Q9BXS4 323 aa2.39□□□□□ -2.03
CHD1-201ENST00000284049 ANGPTL4Q9BY76 406 aa2.39□□□□□ -2.03
CHD1-201ENST00000284049 ELOVL5Q9NYP7 299 aa2.39□□□□□ -2.03
CHD1-201ENST00000284049 STK17AQ9UEE5 414 aa2.39□□□□□ -2.03
CHD1-201ENST00000284049 COL4A6Q14031 1691 aa2.39□□□□□ -2.03
CHD1-201ENST00000284049 P2RX6O15547 441 aa2.39□□□□□ -2.03
CHD1-201ENST00000284049 PLEKHA8P1O95397 391 aa2.39□□□□□ -2.03
CHD1-201ENST00000284049 GIPP09681 153 aaPredicted RBP2.39□□□□□ -2.03
CHD1-201ENST00000284049 IL32P24001 234 aa2.39□□□□□ -2.03
CHD1-201ENST00000284049 HOXD3P31249 432 aaPredicted RBP2.39□□□□□ -2.03
CHD1-201ENST00000284049 XGP55808 180 aa2.39□□□□□ -2.03
CHD1-201ENST00000284049 PRPS1P60891 318 aa2.39□□□□□ -2.03
CHD1-201ENST00000284049 S100A12P80511 92 aa2.39□□□□□ -2.03
CHD1-201ENST00000284049 NAAAQ02083 359 aa2.39□□□□□ -2.03
CHD1-201ENST00000284049 ST3GAL4Q11206 333 aa2.39□□□□□ -2.03
CHD1-201ENST00000284049 FASTKQ14296 549 aaKnown RBP2.39□□□□□ -2.03
CHD1-201ENST00000284049 CDKN3Q16667 212 aa2.39□□□□□ -2.03
CHD1-201ENST00000284049 PARP15Q460N3 678 aa2.39□□□□□ -2.03
CHD1-201ENST00000284049 SCD5Q86SK9 330 aa2.39□□□□□ -2.03
CHD1-201ENST00000284049 KIR3DL3Q8N743 410 aa2.39□□□□□ -2.03
CHD1-201ENST00000284049 OR6F1Q8NGZ6 308 aa2.39□□□□□ -2.03
CHD1-201ENST00000284049 APOL4Q9BPW4 351 aa2.39□□□□□ -2.03
CHD1-201ENST00000284049 MS4A12Q9NXJ0 267 aa2.39□□□□□ -2.03
CHD1-201ENST00000284049 B4GALT7Q9UBV7 327 aa2.39□□□□□ -2.03
CHD1-201ENST00000284049 CLEC4EQ9ULY5 219 aa2.39□□□□□ -2.03
CHD1-201ENST00000284049 A0A1W2PRF3 423 aa2.39□□□□□ -2.03
CHD1-201ENST00000284049 A0A1W2PRM7 423 aa2.39□□□□□ -2.03
CHD1-201ENST00000284049 NDUFAB1O14561 156 aa2.39□□□□□ -2.03
CHD1-201ENST00000284049 DENRO43583 198 aaKnown RBP2.39□□□□□ -2.03
CHD1-201ENST00000284049 SYNGR3O43761 229 aa2.39□□□□□ -2.03
CHD1-201ENST00000284049 BMP15O95972 392 aa2.39□□□□□ -2.03
CHD1-201ENST00000284049 GLUD1P00367 558 aa2.39□□□□□ -2.03
CHD1-201ENST00000284049 TCP1P17987 556 aaKnown RBP2.39□□□□□ -2.03
CHD1-201ENST00000284049 ITGB7P26010 798 aa2.39□□□□□ -2.03
CHD1-201ENST00000284049 CALCRP30988 508 aa2.39□□□□□ -2.03
CHD1-201ENST00000284049 KCNJ3P48549 501 aa2.39□□□□□ -2.03
CHD1-201ENST00000284049 AMTP48728 403 aa2.39□□□□□ -2.03
CHD1-201ENST00000284049 GLUD2P49448 558 aa2.39□□□□□ -2.03
CHD1-201ENST00000284049 CYBRD1Q53TN4 286 aa2.39□□□□□ -2.03
CHD1-201ENST00000284049 TPTE2P1Q5T6R2 138 aa2.39□□□□□ -2.03
CHD1-201ENST00000284049 DUPD1Q68J44 220 aa2.39□□□□□ -2.03
CHD1-201ENST00000284049 CD300LGQ6UXG3 332 aa2.39□□□□□ -2.03
CHD1-201ENST00000284049 AKAP14Q86UN6 197 aa2.39□□□□□ -2.03
CHD1-201ENST00000284049 APOBEC3FQ8IUX4 373 aaKnown RBP2.39□□□□□ -2.03
CHD1-201ENST00000284049 SLC16A11Q8NCK7 471 aa2.39□□□□□ -2.03
CHD1-201ENST00000284049 CACNG8Q8WXS5 425 aa2.39□□□□□ -2.03
CHD1-201ENST00000284049 CELF6Q96J87 481 aaKnown RBP2.39□□□□□ -2.03
CHD1-201ENST00000284049 SH3GL3Q99963 347 aa2.39□□□□□ -2.03
CHD1-201ENST00000284049 C19orf43Q9BQ61 176 aa2.39□□□□□ -2.03
CHD1-201ENST00000284049 ZNF251Q9BRH9 671 aa2.39□□□□□ -2.03
CHD1-201ENST00000284049 STOML2Q9UJZ1 356 aa2.39□□□□□ -2.03
CHD1-201ENST00000284049 SCN9AQ15858 1988 aa2.39□□□□□ -2.03
CHD1-201ENST00000284049 NKX6-3A6NJ46 265 aa2.39□□□□□ -2.03
CHD1-201ENST00000284049 H3BNH8 94 aa2.39□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms