RNA–Protein interactions for RNA: ENST00000278385.10

CD44-202, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 697 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-202ENST00000278385 ISL1P61371 349 aa3.98□□□□□ -1.77
CD44-202ENST00000278385 RPS13P62277 151 aaKnown RBP3.98□□□□□ -1.77
CD44-202ENST00000278385 RPS4XP62701 263 aaKnown RBP3.98□□□□□ -1.77
CD44-202ENST00000278385 PITX1P78337 314 aaPredicted RBP3.98□□□□□ -1.77
CD44-202ENST00000278385 CX3CL1P78423 397 aa3.98□□□□□ -1.77
CD44-202ENST00000278385 CDKL1Q00532 357 aa3.98□□□□□ -1.77
CD44-202ENST00000278385 ID2Q02363 134 aa3.98□□□□□ -1.77
CD44-202ENST00000278385 ZNF91Q05481 1191 aa3.98□□□□□ -1.77
CD44-202ENST00000278385 TEAD2Q15562 447 aa3.98□□□□□ -1.77
CD44-202ENST00000278385 SNRNP35Q16560 246 aaKnown RBP3.98□□□□□ -1.77
CD44-202ENST00000278385 ZNF74Q16587 644 aa3.98□□□□□ -1.77
CD44-202ENST00000278385 NDUFAF6Q330K2 333 aa3.98□□□□□ -1.77
CD44-202ENST00000278385 MS4A18Q3C1V0 323 aa3.98□□□□□ -1.77
CD44-202ENST00000278385 PIGGQ5H8A4 983 aa3.98□□□□□ -1.77
CD44-202ENST00000278385 SAMD4BQ5PRF9 694 aaKnown RBP3.98□□□□□ -1.77
CD44-202ENST00000278385 CTRB2Q6GPI1 263 aa3.98□□□□□ -1.77
CD44-202ENST00000278385 FCRLAQ7L513 359 aa3.98□□□□□ -1.77
CD44-202ENST00000278385 SHFQ7M4L6 423 aa3.98□□□□□ -1.77
CD44-202ENST00000278385 C5orf24Q7Z6I8 188 aa3.98□□□□□ -1.77
CD44-202ENST00000278385 TMEM156Q8N614 296 aa3.98□□□□□ -1.77
CD44-202ENST00000278385 DMBX1Q8NFW5 382 aa3.98□□□□□ -1.77
CD44-202ENST00000278385 OR8K1Q8NGG5 319 aa3.98□□□□□ -1.77
CD44-202ENST00000278385 OR5R1Q8NH85 324 aa3.98□□□□□ -1.77
CD44-202ENST00000278385 DTD1Q8TEA8 209 aa3.98□□□□□ -1.77
CD44-202ENST00000278385 RNF133Q8WVZ7 376 aa3.98□□□□□ -1.77
CD44-202ENST00000278385 RND1Q92730 232 aa3.98□□□□□ -1.77
CD44-202ENST00000278385 MYDGFQ969H8 173 aa3.98□□□□□ -1.77
CD44-202ENST00000278385 CLDN23Q96B33 292 aa3.98□□□□□ -1.77
CD44-202ENST00000278385 TCEAL4Q96EI5 215 aa3.98□□□□□ -1.77
CD44-202ENST00000278385 ZFP3Q96NJ6 502 aa3.98□□□□□ -1.77
CD44-202ENST00000278385 ERGIC2Q96RQ1 377 aa3.98□□□□□ -1.77
CD44-202ENST00000278385 CIB1Q99828 191 aa3.98□□□□□ -1.77
CD44-202ENST00000278385 SLC6A7Q99884 636 aa3.98□□□□□ -1.77
CD44-202ENST00000278385 KXD1Q9BQD3 176 aa3.98□□□□□ -1.77
CD44-202ENST00000278385 APOL2Q9BQE5 337 aa3.98□□□□□ -1.77
CD44-202ENST00000278385 NICN1Q9BSH3 213 aa3.98□□□□□ -1.77
CD44-202ENST00000278385 RSG1Q9BU20 258 aa3.98□□□□□ -1.77
CD44-202ENST00000278385 ZNF426Q9BUY5 554 aa3.98□□□□□ -1.77
CD44-202ENST00000278385 FGFBP2Q9BYJ0 223 aa3.98□□□□□ -1.77
CD44-202ENST00000278385 PLA2G2FQ9BZM2 168 aa3.98□□□□□ -1.77
CD44-202ENST00000278385 SLITRK2Q9H156 845 aa3.98□□□□□ -1.77
CD44-202ENST00000278385 SLC25A51Q9H1U9 297 aa3.98□□□□□ -1.77
CD44-202ENST00000278385 PIGUQ9H490 435 aa3.98□□□□□ -1.77
CD44-202ENST00000278385 ZNF334Q9HCZ1 680 aaPredicted RBP3.98□□□□□ -1.77
CD44-202ENST00000278385 GDF3Q9NR23 364 aa3.98□□□□□ -1.77
CD44-202ENST00000278385 THSD1Q9NS62 852 aa3.98□□□□□ -1.77
CD44-202ENST00000278385 DMAC2Q9NW81 257 aa3.98□□□□□ -1.77
CD44-202ENST00000278385 SIGLEC8Q9NYZ4 499 aa3.98□□□□□ -1.77
CD44-202ENST00000278385 LAMP3Q9UQV4 416 aa3.98□□□□□ -1.77
CD44-202ENST00000278385 SLC6A5Q9Y345 797 aa3.98□□□□□ -1.77
CD44-202ENST00000278385 CACNG2Q9Y698 323 aa3.98□□□□□ -1.77
CD44-202ENST00000278385 CDH10Q9Y6N8 788 aa3.98□□□□□ -1.77
CD44-202ENST00000278385 V9GYQ6 96 aa3.98□□□□□ -1.77
CD44-202ENST00000278385 XIRP2A4UGR9 3374 aa3.98□□□□□ -1.77
CD44-202ENST00000278385 EYSQ5T1H1 3165 aa3.98□□□□□ -1.77
CD44-202ENST00000278385 KIAA1671Q9BY89 1806 aa3.98□□□□□ -1.77
CD44-202ENST00000278385 TTC28Q96AY4 2481 aa3.97□□□□□ -1.77
CD44-202ENST00000278385 MYBPHLA2RUH7 354 aa3.97□□□□□ -1.77
CD44-202ENST00000278385 FAM74A7A6NL05 159 aa3.97□□□□□ -1.77
CD44-202ENST00000278385 BLOC1S5-TXNDC5H3BN57 136 aa3.97□□□□□ -1.77
CD44-202ENST00000278385 RHODO00212 210 aa3.97□□□□□ -1.77
CD44-202ENST00000278385 KLRC4O43908 158 aa3.97□□□□□ -1.77
CD44-202ENST00000278385 BMP10O95393 424 aa3.97□□□□□ -1.77
CD44-202ENST00000278385 TSPAN13O95857 204 aa3.97□□□□□ -1.77
CD44-202ENST00000278385 F10P00742 488 aa3.97□□□□□ -1.77
CD44-202ENST00000278385 IGHG3P01860 377 aa3.97□□□□□ -1.77
CD44-202ENST00000278385 APOHP02749 345 aaPredicted RBP3.97□□□□□ -1.77
CD44-202ENST00000278385 HMGN1P05114 100 aa3.97□□□□□ -1.77
CD44-202ENST00000278385 GIMD1P0DJR0 217 aa3.97□□□□□ -1.77
CD44-202ENST00000278385 ADORA3P0DMS8 318 aa3.97□□□□□ -1.77
CD44-202ENST00000278385 ACP2P11117 423 aa3.97□□□□□ -1.77
CD44-202ENST00000278385 HMGA1P17096 107 aaKnown RBP3.97□□□□□ -1.77
CD44-202ENST00000278385 NPR2P20594 1047 aa3.97□□□□□ -1.77
CD44-202ENST00000278385 WARSP23381 471 aaKnown RBP3.97□□□□□ -1.77
CD44-202ENST00000278385 IVDP26440 423 aa3.97□□□□□ -1.77
CD44-202ENST00000278385 CASP1P29466 404 aa3.97□□□□□ -1.77
CD44-202ENST00000278385 ALDH3A1P30838 453 aa3.97□□□□□ -1.77
CD44-202ENST00000278385 CALCRP30988 508 aa3.97□□□□□ -1.77
CD44-202ENST00000278385 RPS9P46781 194 aaKnown RBP3.97□□□□□ -1.77
CD44-202ENST00000278385 CX3CR1P49238 355 aa3.97□□□□□ -1.77
CD44-202ENST00000278385 RGS6P49758 472 aa3.97□□□□□ -1.77
CD44-202ENST00000278385 CDH12P55289 794 aa3.97□□□□□ -1.77
CD44-202ENST00000278385 TMPRSS3P57727 454 aa3.97□□□□□ -1.77
CD44-202ENST00000278385 PAX2Q02962 417 aa3.97□□□□□ -1.77
CD44-202ENST00000278385 FCHO2Q0JRZ9 810 aa3.97□□□□□ -1.77
CD44-202ENST00000278385 BNIP2Q12982 314 aa3.97□□□□□ -1.77
CD44-202ENST00000278385 NAB1Q13506 487 aa3.97□□□□□ -1.77
CD44-202ENST00000278385 ITGA9Q13797 1035 aa3.97□□□□□ -1.77
CD44-202ENST00000278385 SF3B4Q15427 424 aaKnown RBP eCLIP3.97□□□□□ -1.77
CD44-202ENST00000278385 OR4D1Q15615 310 aa3.97□□□□□ -1.77
CD44-202ENST00000278385 TSC22D1Q15714 1073 aa3.97□□□□□ -1.77
CD44-202ENST00000278385 KLHL38Q2WGJ6 581 aa3.97□□□□□ -1.77
CD44-202ENST00000278385 COX19Q49B96 90 aa3.97□□□□□ -1.77
CD44-202ENST00000278385 FAM74A3Q4VXF1 159 aa3.97□□□□□ -1.77
CD44-202ENST00000278385 TP53I3Q53FA7 332 aa3.97□□□□□ -1.77
CD44-202ENST00000278385 AWAT1Q58HT5 328 aa3.97□□□□□ -1.77
CD44-202ENST00000278385 DHRS11Q6UWP2 260 aa3.97□□□□□ -1.77
CD44-202ENST00000278385 GDPD4Q6W3E5 623 aa3.97□□□□□ -1.77
CD44-202ENST00000278385 C3P1Q6ZMU1 363 aa3.97□□□□□ -1.77
CD44-202ENST00000278385 ZNF66Q6ZN08 573 aa3.97□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms