RNA–Protein interactions for RNA: ENST00000271628.8

SF3B4-201, Transcript of splicing factor 3b subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3B4, Length 2,085 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B4-201ENST00000271628 B3GALT5Q9Y2C3 310 aa13.78□□□□□ -0.2
SF3B4-201ENST00000271628 TMEM14AQ9Y6G1 99 aa13.78□□□□□ -0.2
SF3B4-201ENST00000271628 DCTN6O00399 190 aa13.78□□□□□ -0.2
SF3B4-201ENST00000271628 PLGP00747 810 aaPredicted RBP13.78□□□□□ -0.2
SF3B4-201ENST00000271628 TFPIP10646 304 aa13.78□□□□□ -0.2
SF3B4-201ENST00000271628 MTNR1BP49286 362 aa13.78□□□□□ -0.2
SF3B4-201ENST00000271628 MLF1P58340 268 aa13.78□□□□□ -0.2
SF3B4-201ENST00000271628 MRPL28Q13084 256 aaKnown RBP13.78□□□□□ -0.2
SF3B4-201ENST00000271628 IL18Q14116 193 aa13.78□□□□□ -0.2
SF3B4-201ENST00000271628 SLC22A10Q63ZE4 541 aa13.78□□□□□ -0.2
SF3B4-201ENST00000271628 NOXA1Q86UR1 476 aa13.78□□□□□ -0.2
SF3B4-201ENST00000271628 PLCZ1Q86YW0 608 aa13.78□□□□□ -0.2
SF3B4-201ENST00000271628 PM20D2Q8IYS1 436 aa13.78□□□□□ -0.2
SF3B4-201ENST00000271628 RFLNBQ8N5W9 214 aa13.78□□□□□ -0.2
SF3B4-201ENST00000271628 WDSUB1Q8N9V3 476 aa13.78□□□□□ -0.2
SF3B4-201ENST00000271628 ABHD4Q8TB40 342 aa13.78□□□□□ -0.2
SF3B4-201ENST00000271628 PAQR8Q8TEZ7 354 aa13.78□□□□□ -0.2
SF3B4-201ENST00000271628 GHSRQ92847 366 aa13.78□□□□□ -0.2
SF3B4-201ENST00000271628 ZBTB8AQ96BR9 441 aa13.78□□□□□ -0.2
SF3B4-201ENST00000271628 PGLYRP3Q96LB9 341 aa13.78□□□□□ -0.2
SF3B4-201ENST00000271628 KCNJ15Q99712 375 aa13.78□□□□□ -0.2
SF3B4-201ENST00000271628 ANGPTL4Q9BY76 406 aa13.78□□□□□ -0.2
SF3B4-201ENST00000271628 FANCFQ9NPI8 374 aa13.78□□□□□ -0.2
SF3B4-201ENST00000271628 NUFIP1Q9UHK0 495 aaKnown RBP13.78□□□□□ -0.2
SF3B4-201ENST00000271628 ST6GALNAC2Q9UJ37 374 aa13.78□□□□□ -0.2
SF3B4-201ENST00000271628 A0A087WZY1 265 aa13.77□□□□□ -0.21
SF3B4-201ENST00000271628 C4orf47A7E2U8 309 aa13.77□□□□□ -0.21
SF3B4-201ENST00000271628 C9orf172C9J069 976 aa13.77□□□□□ -0.21
SF3B4-201ENST00000271628 MS4A18H0YCH9 400 aa13.77□□□□□ -0.21
SF3B4-201ENST00000271628 H7C1C5 153 aa13.77□□□□□ -0.21
SF3B4-201ENST00000271628 PHYHO14832 338 aa13.77□□□□□ -0.21
SF3B4-201ENST00000271628 SC5DO75845 299 aa13.77□□□□□ -0.21
SF3B4-201ENST00000271628 HPP00738 406 aa13.77□□□□□ -0.21
SF3B4-201ENST00000271628 OTX2P32243 289 aa13.77□□□□□ -0.21
SF3B4-201ENST00000271628 LCN6P62502 163 aa13.77□□□□□ -0.21
SF3B4-201ENST00000271628 CDK5R1Q15078 307 aa13.77□□□□□ -0.21
SF3B4-201ENST00000271628 MS4A18Q3C1V0 323 aa13.77□□□□□ -0.21
SF3B4-201ENST00000271628 TIGD3Q6B0B8 471 aa13.77□□□□□ -0.21
SF3B4-201ENST00000271628 PPP1R32Q7Z5V6 425 aa13.77□□□□□ -0.21
SF3B4-201ENST00000271628 ESX1Q8N693 406 aa13.77□□□□□ -0.21
SF3B4-201ENST00000271628 LILRB4Q8NHJ6 448 aa13.77□□□□□ -0.21
SF3B4-201ENST00000271628 SLC25A43Q8WUT9 341 aaPredicted RBP13.77□□□□□ -0.21
SF3B4-201ENST00000271628 ADAD1Q96M93 576 aaKnown RBP13.77□□□□□ -0.21
SF3B4-201ENST00000271628 DMRTB1Q96MA1 342 aa13.77□□□□□ -0.21
SF3B4-201ENST00000271628 UBL7Q96S82 380 aaPredicted RBP13.77□□□□□ -0.21
SF3B4-201ENST00000271628 FAM117AQ9C073 453 aa13.77□□□□□ -0.21
SF3B4-201ENST00000271628 RANGRFQ9HD47 186 aaPredicted RBP13.77□□□□□ -0.21
SF3B4-201ENST00000271628 HPF1Q9NWY4 346 aa13.77□□□□□ -0.21
SF3B4-201ENST00000271628 ALKBH4Q9NXW9 302 aa13.77□□□□□ -0.21
SF3B4-201ENST00000271628 SHISA3A0PJX4 238 aa13.76□□□□□ -0.21
SF3B4-201ENST00000271628 A6NIZ1 184 aa13.76□□□□□ -0.21
SF3B4-201ENST00000271628 LIPT2A6NK58 231 aa13.76□□□□□ -0.21
SF3B4-201ENST00000271628 H3BML4 177 aa13.76□□□□□ -0.21
SF3B4-201ENST00000271628 CRABP1P29762 137 aa13.76□□□□□ -0.21
SF3B4-201ENST00000271628 DAP3P51398 398 aaKnown RBP13.76□□□□□ -0.21
SF3B4-201ENST00000271628 RAP1BP61224 184 aa13.76□□□□□ -0.21
SF3B4-201ENST00000271628 RAP1AP62834 184 aa13.76□□□□□ -0.21
SF3B4-201ENST00000271628 TLE3Q04726 772 aa13.76□□□□□ -0.21
SF3B4-201ENST00000271628 CHAF1BQ13112 559 aa13.76□□□□□ -0.21
SF3B4-201ENST00000271628 P2RY14Q15391 338 aa13.76□□□□□ -0.21
SF3B4-201ENST00000271628 INPP5JQ15735 1006 aaPredicted RBP13.76□□□□□ -0.21
SF3B4-201ENST00000271628 PRAMEF20Q5VT98 475 aa13.76□□□□□ -0.21
SF3B4-201ENST00000271628 LYPD4Q6UWN0 246 aa13.76□□□□□ -0.21
SF3B4-201ENST00000271628 RPTNQ6XPR3 784 aa13.76□□□□□ -0.21
SF3B4-201ENST00000271628 TPRA1Q86W33 373 aa13.76□□□□□ -0.21
SF3B4-201ENST00000271628 CDC20BQ86Y33 519 aa13.76□□□□□ -0.21
SF3B4-201ENST00000271628 TCTE3Q8IZS6 198 aa13.76□□□□□ -0.21
SF3B4-201ENST00000271628 POC1BQ8TC44 478 aa13.76□□□□□ -0.21
SF3B4-201ENST00000271628 KCTD12Q96CX2 325 aaKnown RBP13.76□□□□□ -0.21
SF3B4-201ENST00000271628 RNF170Q96K19 258 aa13.76□□□□□ -0.21
SF3B4-201ENST00000271628 SGCZQ96LD1 299 aa13.76□□□□□ -0.21
SF3B4-201ENST00000271628 KLHL15Q96M94 604 aa13.76□□□□□ -0.21
SF3B4-201ENST00000271628 INTS14Q96SY0 518 aa13.76□□□□□ -0.21
SF3B4-201ENST00000271628 SLA2Q9H6Q3 261 aa13.76□□□□□ -0.21
SF3B4-201ENST00000271628 WDR76Q9H967 626 aa13.76□□□□□ -0.21
SF3B4-201ENST00000271628 CHST11Q9NPF2 352 aa13.76□□□□□ -0.21
SF3B4-201ENST00000271628 LAMP5Q9UJQ1 280 aa13.76□□□□□ -0.21
SF3B4-201ENST00000271628 FBXL2Q9UKC9 423 aa13.76□□□□□ -0.21
SF3B4-201ENST00000271628 B9D1Q9UPM9 204 aa13.76□□□□□ -0.21
SF3B4-201ENST00000271628 A0A0B4J293 547 aa13.76□□□□□ -0.21
SF3B4-201ENST00000271628 TRBV2A0A0J9YWF9 115 aa13.76□□□□□ -0.21
SF3B4-201ENST00000271628 FAM240BA0A1B0GVZ2 78 aa13.76□□□□□ -0.21
SF3B4-201ENST00000271628 A8MV72 311 aaPredicted RBP13.76□□□□□ -0.21
SF3B4-201ENST00000271628 LYRM1O43325 122 aa13.76□□□□□ -0.21
SF3B4-201ENST00000271628 GPRIN2O60269 458 aa13.76□□□□□ -0.21
SF3B4-201ENST00000271628 FZD7O75084 574 aa13.76□□□□□ -0.21
SF3B4-201ENST00000271628 PSKH1P11801 424 aa13.76□□□□□ -0.21
SF3B4-201ENST00000271628 RPS18P62269 152 aaKnown RBP13.76□□□□□ -0.21
SF3B4-201ENST00000271628 INSL4Q14641 139 aa13.76□□□□□ -0.21
SF3B4-201ENST00000271628 FAM205BPQ63HN1 556 aa13.76□□□□□ -0.21
SF3B4-201ENST00000271628 FAM220AQ7Z4H9 259 aa13.76□□□□□ -0.21
SF3B4-201ENST00000271628 CEACAM19Q7Z692 300 aa13.76□□□□□ -0.21
SF3B4-201ENST00000271628 PXKQ7Z7A4 578 aa13.76□□□□□ -0.21
SF3B4-201ENST00000271628 LIX1LQ8IVB5 337 aa13.76□□□□□ -0.21
SF3B4-201ENST00000271628 TEX19Q8NA77 164 aa13.76□□□□□ -0.21
SF3B4-201ENST00000271628 UBASH3BQ8TF42 649 aa13.76□□□□□ -0.21
SF3B4-201ENST00000271628 GPR87Q9BY21 358 aa13.76□□□□□ -0.21
SF3B4-201ENST00000271628 TTTY10Q9BZA0 68 aa13.76□□□□□ -0.21
SF3B4-201ENST00000271628 RNF32Q9H0A6 362 aa13.76□□□□□ -0.21
SF3B4-201ENST00000271628 HRH3Q9Y5N1 445 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms