RNA–Protein interactions for RNA: ENST00000269571.9

ERBB2-201, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ERBB2, Length 4,545 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-201ENST00000269571 CRLF2Q9HC73 371 aa11.13□□□□□ -0.63
ERBB2-201ENST00000269571 MEPEQ9NQ76 525 aaPredicted RBP11.13□□□□□ -0.63
ERBB2-201ENST00000269571 FTSJ1Q9UET6 329 aa11.13□□□□□ -0.63
ERBB2-201ENST00000269571 FAM221BA6H8Z2 402 aa11.13□□□□□ -0.63
ERBB2-201ENST00000269571 ST8SIA5O15466 376 aa11.13□□□□□ -0.63
ERBB2-201ENST00000269571 CDK2P24941 298 aa11.13□□□□□ -0.63
ERBB2-201ENST00000269571 ST3GAL2Q16842 350 aa11.13□□□□□ -0.63
ERBB2-201ENST00000269571 HIST2H3AQ71DI3 136 aa11.13□□□□□ -0.63
ERBB2-201ENST00000269571 KDM8Q8N371 416 aa11.13□□□□□ -0.63
ERBB2-201ENST00000269571 TOE1Q96GM8 510 aaKnown RBP11.13□□□□□ -0.63
ERBB2-201ENST00000269571 AP1S3Q96PC3 154 aa11.13□□□□□ -0.63
ERBB2-201ENST00000269571 PRRT1Q99946 306 aa11.13□□□□□ -0.63
ERBB2-201ENST00000269571 ENKD1Q9H0I2 346 aa11.13□□□□□ -0.63
ERBB2-201ENST00000269571 OR51M1Q9H341 326 aa11.13□□□□□ -0.63
ERBB2-201ENST00000269571 CCDC86Q9H6F5 360 aaKnown RBP11.13□□□□□ -0.63
ERBB2-201ENST00000269571 KPTNQ9Y664 436 aa11.13□□□□□ -0.63
ERBB2-201ENST00000269571 CABIN1Q9Y6J0 2220 aa11.13□□□□□ -0.63
ERBB2-201ENST00000269571 CDC14CA4D256 554 aa11.13□□□□□ -0.63
ERBB2-201ENST00000269571 H3BML4 177 aa11.13□□□□□ -0.63
ERBB2-201ENST00000269571 PGCP20142 388 aa11.13□□□□□ -0.63
ERBB2-201ENST00000269571 CD22P20273 847 aa11.13□□□□□ -0.63
ERBB2-201ENST00000269571 CD80P33681 288 aa11.13□□□□□ -0.63
ERBB2-201ENST00000269571 GPR18Q14330 331 aa11.13□□□□□ -0.63
ERBB2-201ENST00000269571 HLXQ14774 488 aaPredicted RBP11.13□□□□□ -0.63
ERBB2-201ENST00000269571 TMEM71Q6P5X7 295 aa11.13□□□□□ -0.63
ERBB2-201ENST00000269571 OR10D4PQ8NGN7 298 aa11.13□□□□□ -0.63
ERBB2-201ENST00000269571 OR5M1Q8NGP8 315 aa11.13□□□□□ -0.63
ERBB2-201ENST00000269571 Q96M85 177 aa11.13□□□□□ -0.63
ERBB2-201ENST00000269571 INSM2Q96T92 566 aaPredicted RBP11.13□□□□□ -0.63
ERBB2-201ENST00000269571 DNMT3BQ9UBC3 853 aaKnown RBP11.13□□□□□ -0.63
ERBB2-201ENST00000269571 FER1L6Q2WGJ9 1857 aa11.13□□□□□ -0.63
ERBB2-201ENST00000269571 CKAP5Q14008 2032 aa11.13□□□□□ -0.63
ERBB2-201ENST00000269571 SERPINA5P05154 406 aa11.12□□□□□ -0.63
ERBB2-201ENST00000269571 HNRNPA2B1P22626 353 aaKnown RBP11.12□□□□□ -0.63
ERBB2-201ENST00000269571 AKR1C3P42330 323 aa11.12□□□□□ -0.63
ERBB2-201ENST00000269571 PRPS1P60891 318 aa11.12□□□□□ -0.63
ERBB2-201ENST00000269571 TIAL1Q01085 375 aaKnown RBP eCLIP11.12□□□□□ -0.636e-9■■■■□ 21.2
ERBB2-201ENST00000269571 PLGLB1Q02325 96 aa11.12□□□□□ -0.63
ERBB2-201ENST00000269571 ZNF124Q15973 351 aa11.12□□□□□ -0.63
ERBB2-201ENST00000269571 OR13C9Q8NGT0 318 aa11.12□□□□□ -0.63
ERBB2-201ENST00000269571 RLN3Q8WXF3 142 aa11.12□□□□□ -0.63
ERBB2-201ENST00000269571 MR1Q95460 341 aa11.12□□□□□ -0.63
ERBB2-201ENST00000269571 WDR89Q96FK6 387 aaPredicted RBP11.12□□□□□ -0.63
ERBB2-201ENST00000269571 SELENOIQ9C0D9 397 aa11.12□□□□□ -0.63
ERBB2-201ENST00000269571 ISYNA1Q9NPH2 558 aa11.12□□□□□ -0.63
ERBB2-201ENST00000269571 CGGBP1Q9UFW8 167 aaPredicted RBP11.12□□□□□ -0.63
ERBB2-201ENST00000269571 HS3ST2Q9Y278 367 aa11.12□□□□□ -0.63
ERBB2-201ENST00000269571 V9GYH0 126 aa11.12□□□□□ -0.63
ERBB2-201ENST00000269571 MEGF11A6BM72 1044 aa11.12□□□□□ -0.63
ERBB2-201ENST00000269571 RPL19P84098 196 aaKnown RBP11.12□□□□□ -0.63
ERBB2-201ENST00000269571 ZNF79Q15937 498 aa11.12□□□□□ -0.63
ERBB2-201ENST00000269571 Q499Y3 187 aa11.12□□□□□ -0.63
ERBB2-201ENST00000269571 LAIR1Q6GTX8 287 aa11.12□□□□□ -0.63
ERBB2-201ENST00000269571 MEX3BQ6ZN04 569 aaKnown RBP11.12□□□□□ -0.63
ERBB2-201ENST00000269571 ZNF620Q6ZNG0 422 aa11.12□□□□□ -0.63
ERBB2-201ENST00000269571 OR14A16Q8NHC5 309 aa11.12□□□□□ -0.63
ERBB2-201ENST00000269571 PGAM5Q96HS1 289 aa11.12□□□□□ -0.63
ERBB2-201ENST00000269571 EDEM2Q9BV94 578 aa11.12□□□□□ -0.63
ERBB2-201ENST00000269571 VSX1Q9NZR4 365 aaPredicted RBP11.12□□□□□ -0.63
ERBB2-201ENST00000269571 GHRLQ9UBU3 117 aa11.12□□□□□ -0.63
ERBB2-201ENST00000269571 PLEKHB1Q9UF11 243 aaPredicted RBP11.12□□□□□ -0.63
ERBB2-201ENST00000269571 FBXL4Q9UKA2 621 aa11.12□□□□□ -0.63
ERBB2-201ENST00000269571 FAM74A7A6NL05 159 aa11.12□□□□□ -0.63
ERBB2-201ENST00000269571 K7EPK0 472 aa11.12□□□□□ -0.63
ERBB2-201ENST00000269571 PEX12O00623 359 aa11.12□□□□□ -0.63
ERBB2-201ENST00000269571 IFNA2P01563 188 aa11.12□□□□□ -0.63
ERBB2-201ENST00000269571 SDHAP31040 664 aa11.12□□□□□ -0.63
ERBB2-201ENST00000269571 IHHQ14623 411 aa11.12□□□□□ -0.63
ERBB2-201ENST00000269571 OR7A5Q15622 319 aa11.12□□□□□ -0.63
ERBB2-201ENST00000269571 FAM74A3Q4VXF1 159 aa11.12□□□□□ -0.63
ERBB2-201ENST00000269571 UQCC3Q6UW78 93 aa11.12□□□□□ -0.63
ERBB2-201ENST00000269571 FAM71E2Q8N5Q1 922 aa11.12□□□□□ -0.63
ERBB2-201ENST00000269571 ADOQ96SZ5 270 aa11.12□□□□□ -0.63
ERBB2-201ENST00000269571 TSPAN10Q9H1Z9 355 aaPredicted RBP11.12□□□□□ -0.63
ERBB2-201ENST00000269571 NCDNQ9UBB6 729 aa11.12□□□□□ -0.63
ERBB2-201ENST00000269571 WASF3Q9UPY6 502 aa11.12□□□□□ -0.63
ERBB2-201ENST00000269571 SLC22A23A1A5C7 686 aa11.12□□□□□ -0.63
ERBB2-201ENST00000269571 TMEM200CA6NKL6 621 aa11.12□□□□□ -0.63
ERBB2-201ENST00000269571 GABARAPH6UMI1 98 aa11.12□□□□□ -0.63
ERBB2-201ENST00000269571 YY2O15391 372 aa11.12□□□□□ -0.63
ERBB2-201ENST00000269571 PAPLNO95428 1278 aa11.12□□□□□ -0.63
ERBB2-201ENST00000269571 FBLP22087 321 aaKnown RBP11.12□□□□□ -0.63
ERBB2-201ENST00000269571 ALKBH1Q13686 389 aaKnown RBP11.12□□□□□ -0.63
ERBB2-201ENST00000269571 SFRP5Q5T4F7 317 aa11.12□□□□□ -0.63
ERBB2-201ENST00000269571 FAM69BQ5VUD6 431 aa11.12□□□□□ -0.63
ERBB2-201ENST00000269571 TRAPPC6BQ86SZ2 158 aa11.12□□□□□ -0.63
ERBB2-201ENST00000269571 ABHD1Q96SE0 405 aa11.12□□□□□ -0.63
ERBB2-201ENST00000269571 MIXL1Q9H2W2 232 aa11.12□□□□□ -0.63
ERBB2-201ENST00000269571 FN3KRPQ9HA64 309 aa11.12□□□□□ -0.63
ERBB2-201ENST00000269571 LIMS3P0CW19 117 aa11.11□□□□□ -0.63
ERBB2-201ENST00000269571 LIMS4P0CW20 117 aa11.11□□□□□ -0.63
ERBB2-201ENST00000269571 TMEM225BP0DP42 221 aa11.11□□□□□ -0.63
ERBB2-201ENST00000269571 CPMP14384 443 aa11.11□□□□□ -0.63
ERBB2-201ENST00000269571 MGMTP16455 207 aa11.11□□□□□ -0.63
ERBB2-201ENST00000269571 IRS1P35568 1242 aa11.11□□□□□ -0.63
ERBB2-201ENST00000269571 UBE2KP61086 200 aa11.11□□□□□ -0.63
ERBB2-201ENST00000269571 SOHLH1Q5JUK2 328 aa11.11□□□□□ -0.63
ERBB2-201ENST00000269571 GLYATL3Q5SZD4 288 aa11.11□□□□□ -0.63
ERBB2-201ENST00000269571 TMEM164Q5U3C3 297 aa11.11□□□□□ -0.63
ERBB2-201ENST00000269571 Q6ZSR6 202 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms