RNA–Protein interactions for RNA: ENST00000263073.10

SMG6-201, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMG6, Length 5,960 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-201ENST00000263073 MICAL3Q7RTP6 2002 aa11.11□□□□□ -0.63
SMG6-201ENST00000263073 LOC100289279A0A1B0GTE1 492 aa11.11□□□□□ -0.63
SMG6-201ENST00000263073 GPR137BO60478 399 aa11.11□□□□□ -0.63
SMG6-201ENST00000263073 THBS1P07996 1170 aa11.11□□□□□ -0.63
SMG6-201ENST00000263073 BCL6P41182 706 aa11.11□□□□□ -0.63
SMG6-201ENST00000263073 CCR9P51686 369 aa11.11□□□□□ -0.63
SMG6-201ENST00000263073 PRSS36Q5K4E3 855 aa11.11□□□□□ -0.63
SMG6-201ENST00000263073 ASTLQ6HA08 431 aaPredicted RBP11.11□□□□□ -0.63
SMG6-201ENST00000263073 MFSD9Q8NBP5 474 aa11.11□□□□□ -0.63
SMG6-201ENST00000263073 BHLHE23Q8NDY6 225 aa11.11□□□□□ -0.63
SMG6-201ENST00000263073 OR2G3Q8NGZ4 309 aa11.11□□□□□ -0.63
SMG6-201ENST00000263073 ZNF566Q969W8 418 aa11.11□□□□□ -0.63
SMG6-201ENST00000263073 ANKRD9Q96BM1 317 aaPredicted RBP11.11□□□□□ -0.63
SMG6-201ENST00000263073 C12orf57Q99622 126 aa11.11□□□□□ -0.63
SMG6-201ENST00000263073 C1orf198Q9H425 327 aa11.11□□□□□ -0.63
SMG6-201ENST00000263073 ACER3Q9NUN7 267 aa11.11□□□□□ -0.63
SMG6-201ENST00000263073 HSFX1Q9UBD0 423 aa11.11□□□□□ -0.63
SMG6-201ENST00000263073 DHCR7Q9UBM7 475 aaKnown RBP11.11□□□□□ -0.63
SMG6-201ENST00000263073 SLC5A10A0PJK1 596 aa11.11□□□□□ -0.63
SMG6-201ENST00000263073 SERINC4A6NH21 518 aa11.11□□□□□ -0.63
SMG6-201ENST00000263073 K7ESM1 405 aa11.11□□□□□ -0.63
SMG6-201ENST00000263073 ENSAO43768 121 aaKnown RBP11.11□□□□□ -0.63
SMG6-201ENST00000263073 ADRB1P08588 477 aa11.11□□□□□ -0.63
SMG6-201ENST00000263073 CTSAP10619 480 aa11.11□□□□□ -0.63
SMG6-201ENST00000263073 FABP5Q01469 135 aa11.11□□□□□ -0.63
SMG6-201ENST00000263073 SLC16A14Q7RTX9 510 aa11.11□□□□□ -0.63
SMG6-201ENST00000263073 FAM185AQ8N0U4 392 aa11.11□□□□□ -0.63
SMG6-201ENST00000263073 ZFP62Q8NB50 900 aaPredicted RBP11.11□□□□□ -0.63
SMG6-201ENST00000263073 OR51A4Q8NGJ6 313 aa11.11□□□□□ -0.63
SMG6-201ENST00000263073 OR51A2Q8NGJ7 313 aa11.11□□□□□ -0.63
SMG6-201ENST00000263073 ANKRD19PQ9H560 264 aa11.11□□□□□ -0.63
SMG6-201ENST00000263073 A4GALTQ9NPC4 353 aa11.11□□□□□ -0.63
SMG6-201ENST00000263073 EXOSC3Q9NQT5 275 aaKnown RBP11.11□□□□□ -0.63
SMG6-201ENST00000263073 TAAR2Q9P1P5 351 aa11.11□□□□□ -0.63
SMG6-201ENST00000263073 ADAM23O75077 832 aa11.11□□□□□ -0.63
SMG6-201ENST00000263073 IGHV3-9P01782 118 aa11.11□□□□□ -0.63
SMG6-201ENST00000263073 FABP6P51161 128 aa11.11□□□□□ -0.63
SMG6-201ENST00000263073 SNRPNP63162 240 aaKnown RBP11.11□□□□□ -0.63
SMG6-201ENST00000263073 ARHGAP11BQ3KRB8 267 aa11.11□□□□□ -0.63
SMG6-201ENST00000263073 GGTA1PQ4G0N0 100 aa11.11□□□□□ -0.63
SMG6-201ENST00000263073 CORO6Q6QEF8 472 aa11.11□□□□□ -0.63
SMG6-201ENST00000263073 NAA40Q86UY6 237 aa11.11□□□□□ -0.63
SMG6-201ENST00000263073 ANGPTL5Q86XS5 388 aa11.11□□□□□ -0.63
SMG6-201ENST00000263073 ANKLE1Q8NAG6 615 aa11.11□□□□□ -0.63
SMG6-201ENST00000263073 DYNC2LI1Q8TCX1 351 aa11.11□□□□□ -0.63
SMG6-201ENST00000263073 C22orf15Q8WYQ4 148 aa11.11□□□□□ -0.63
SMG6-201ENST00000263073 ZBED3Q96IU2 234 aaPredicted RBP11.11□□□□□ -0.63
SMG6-201ENST00000263073 SYT5O00445 386 aa11.11□□□□□ -0.63
SMG6-201ENST00000263073 TRA2BP62995 288 aaKnown RBP11.11□□□□□ -0.63
SMG6-201ENST00000263073 ABHD17BQ5VST6 288 aa11.11□□□□□ -0.63
SMG6-201ENST00000263073 TMEM43Q9BTV4 400 aa11.11□□□□□ -0.63
SMG6-201ENST00000263073 CREBZFQ9NS37 354 aa11.11□□□□□ -0.63
SMG6-201ENST00000263073 MTCH1Q9NZJ7 389 aa11.11□□□□□ -0.63
SMG6-201ENST00000263073 NWD2Q9ULI1 1742 aa11.11□□□□□ -0.63
SMG6-201ENST00000263073 C4AP0C0L4 1744 aa11.11□□□□□ -0.63
SMG6-201ENST00000263073 C4BP0C0L5 1744 aa11.11□□□□□ -0.63
SMG6-201ENST00000263073 LAMB4A4D0S4 1761 aa11.11□□□□□ -0.63
SMG6-201ENST00000263073 SDCBPO00560 298 aaPredicted RBP11.1□□□□□ -0.63
SMG6-201ENST00000263073 PRAMEF4O60810 478 aa11.1□□□□□ -0.63
SMG6-201ENST00000263073 ZDHHC11BP0C7U3 371 aa11.1□□□□□ -0.63
SMG6-201ENST00000263073 GABRB1P18505 474 aa11.1□□□□□ -0.63
SMG6-201ENST00000263073 ZNF385BQ569K4 471 aa11.1□□□□□ -0.63
SMG6-201ENST00000263073 OTUD1Q5VV17 481 aaPredicted RBP11.1□□□□□ -0.63
SMG6-201ENST00000263073 SLC39A5Q6ZMH5 540 aa11.1□□□□□ -0.63
SMG6-201ENST00000263073 MITD1Q8WV92 249 aa11.1□□□□□ -0.63
SMG6-201ENST00000263073 FAM3CQ92520 227 aa11.1□□□□□ -0.63
SMG6-201ENST00000263073 ZNF75AQ96N20 296 aa11.1□□□□□ -0.63
SMG6-201ENST00000263073 FN3KRPQ9HA64 309 aa11.1□□□□□ -0.63
SMG6-201ENST00000263073 V9GYS6 101 aa11.1□□□□□ -0.63
SMG6-201ENST00000263073 TCRBV5S1A1TA0A578 114 aa11.1□□□□□ -0.63
SMG6-201ENST00000263073 FAM221AA4D161 298 aa11.1□□□□□ -0.63
SMG6-201ENST00000263073 GPRIN2O60269 458 aa11.1□□□□□ -0.63
SMG6-201ENST00000263073 UTS2O95399 124 aa11.1□□□□□ -0.63
SMG6-201ENST00000263073 RRASP10301 218 aa11.1□□□□□ -0.63
SMG6-201ENST00000263073 HLA-DOBP13765 273 aa11.1□□□□□ -0.63
SMG6-201ENST00000263073 NME1P15531 152 aaKnown RBP11.1□□□□□ -0.63
SMG6-201ENST00000263073 DPP4P27487 766 aa11.1□□□□□ -0.63
SMG6-201ENST00000263073 TSFMP43897 325 aaKnown RBP11.1□□□□□ -0.63
SMG6-201ENST00000263073 ACKR1Q16570 336 aa11.1□□□□□ -0.63
SMG6-201ENST00000263073 TMEM201Q5SNT2 666 aa11.1□□□□□ -0.63
SMG6-201ENST00000263073 NEURL3Q96EH8 262 aa11.1□□□□□ -0.63
SMG6-201ENST00000263073 EMC6Q9BV81 110 aa11.1□□□□□ -0.63
SMG6-201ENST00000263073 GSX2Q9BZM3 304 aa11.1□□□□□ -0.63
SMG6-201ENST00000263073 COA3Q9Y2R0 106 aaPredicted RBP11.1□□□□□ -0.63
SMG6-201ENST00000263073 MYH9P35579 1960 aaKnown RBP11.1□□□□□ -0.63
SMG6-201ENST00000263073 A0A1B0GTL3 188 aa11.1□□□□□ -0.63
SMG6-201ENST00000263073 PRSS44E7EML9 344 aa11.1□□□□□ -0.63
SMG6-201ENST00000263073 RAF1P04049 648 aa11.1□□□□□ -0.63
SMG6-201ENST00000263073 HENMT1Q5T8I9 393 aaKnown RBP11.1□□□□□ -0.63
SMG6-201ENST00000263073 HTR3DQ70Z44 454 aa11.1□□□□□ -0.63
SMG6-201ENST00000263073 OR1S2Q8NGQ3 325 aa11.1□□□□□ -0.63
SMG6-201ENST00000263073 ALS2Q96Q42 1657 aa11.1□□□□□ -0.63
SMG6-201ENST00000263073 MS4A8Q9BY19 250 aa11.1□□□□□ -0.63
SMG6-201ENST00000263073 LRIT1Q9P2V4 623 aa11.1□□□□□ -0.63
SMG6-201ENST00000263073 C17orf113A0A1B0GUU1 675 aa11.1□□□□□ -0.63
SMG6-201ENST00000263073 HS3ST1O14792 307 aa11.1□□□□□ -0.63
SMG6-201ENST00000263073 HYAL3O43820 417 aaPredicted RBP11.1□□□□□ -0.63
SMG6-201ENST00000263073 PMS2P2O95744 297 aa11.1□□□□□ -0.63
SMG6-201ENST00000263073 CA3P07451 260 aa11.1□□□□□ -0.63
SMG6-201ENST00000263073 BCKDHBP21953 392 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms