RNA–Protein interactions for RNA: ENST00000262640.11

VAMP7-201, Transcript of vesicle associated membrane protein 7, humanhuman

TSL 1 (best) BASIC

Gene VAMP7, Length 2,496 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP7-201ENST00000262640 SLC35F4A4IF30 521 aa11.6□□□□□ -0.55
VAMP7-201ENST00000262640 ZNF726A6NNF4 738 aa11.6□□□□□ -0.55
VAMP7-201ENST00000262640 CENPBD1B2RD01 187 aa11.6□□□□□ -0.55
VAMP7-201ENST00000262640 NPIPA2E9PIF3 369 aa11.6□□□□□ -0.55
VAMP7-201ENST00000262640 NPIPA3F8WFD2 350 aa11.6□□□□□ -0.55
VAMP7-201ENST00000262640 AKAP8O43823 692 aaKnown RBP11.6□□□□□ -0.55
VAMP7-201ENST00000262640 ZNF708P17019 499 aa11.6□□□□□ -0.55
VAMP7-201ENST00000262640 CLDN15P56746 228 aa11.6□□□□□ -0.55
VAMP7-201ENST00000262640 CLDN18P56856 261 aa11.6□□□□□ -0.55
VAMP7-201ENST00000262640 CLRN1P58418 232 aa11.6□□□□□ -0.55
VAMP7-201ENST00000262640 ACTA2P62736 377 aa11.6□□□□□ -0.55
VAMP7-201ENST00000262640 ACTG2P63267 376 aa11.6□□□□□ -0.55
VAMP7-201ENST00000262640 BDH1Q02338 343 aa11.6□□□□□ -0.55
VAMP7-201ENST00000262640 SLC17A1Q14916 467 aa11.6□□□□□ -0.55
VAMP7-201ENST00000262640 CTF1Q16619 201 aa11.6□□□□□ -0.55
VAMP7-201ENST00000262640 C19orf48Q6RUI8 117 aa11.6□□□□□ -0.55
VAMP7-201ENST00000262640 LYPD4Q6UWN0 246 aa11.6□□□□□ -0.55
VAMP7-201ENST00000262640 CREB3L2Q70SY1 520 aa11.6□□□□□ -0.55
VAMP7-201ENST00000262640 ERI1Q8IV48 349 aaKnown RBP11.6□□□□□ -0.55
VAMP7-201ENST00000262640 WDFY1Q8IWB7 410 aa11.6□□□□□ -0.55
VAMP7-201ENST00000262640 NOXO1Q8NFA2 376 aa11.6□□□□□ -0.55
VAMP7-201ENST00000262640 OR9K2Q8NGE7 335 aa11.6□□□□□ -0.55
VAMP7-201ENST00000262640 FNDC8Q8TC99 324 aa11.6□□□□□ -0.55
VAMP7-201ENST00000262640 ABTB1Q969K4 478 aaPredicted RBP11.6□□□□□ -0.55
VAMP7-201ENST00000262640 RBP7Q96R05 134 aa11.6□□□□□ -0.55
VAMP7-201ENST00000262640 YIPF3Q9GZM5 350 aa11.6□□□□□ -0.55
VAMP7-201ENST00000262640 TRIM64BA6NI03 449 aa11.6□□□□□ -0.55
VAMP7-201ENST00000262640 RRP8O43159 456 aaKnown RBP11.6□□□□□ -0.55
VAMP7-201ENST00000262640 KHDRBS3O75525 346 aaKnown RBP11.6□□□□□ -0.55
VAMP7-201ENST00000262640 MT-ND5P03915 603 aa11.6□□□□□ -0.55
VAMP7-201ENST00000262640 PGA4P0DJD7 388 aa11.6□□□□□ -0.55
VAMP7-201ENST00000262640 PGA3P0DJD8 388 aa11.6□□□□□ -0.55
VAMP7-201ENST00000262640 CPEP16870 476 aa11.6□□□□□ -0.55
VAMP7-201ENST00000262640 GLO1Q04760 184 aa11.6□□□□□ -0.55
VAMP7-201ENST00000262640 SSX1Q16384 188 aa11.6□□□□□ -0.55
VAMP7-201ENST00000262640 TIMM50Q3ZCQ8 353 aa11.6□□□□□ -0.55
VAMP7-201ENST00000262640 THEM4Q5T1C6 240 aa11.6□□□□□ -0.55
VAMP7-201ENST00000262640 NEIL3Q8TAT5 605 aa11.6□□□□□ -0.55
VAMP7-201ENST00000262640 SMAP2Q8WU79 429 aaPredicted RBP11.6□□□□□ -0.55
VAMP7-201ENST00000262640 INTS14Q96SY0 518 aa11.6□□□□□ -0.55
VAMP7-201ENST00000262640 TVP23AA6NH52 213 aa11.59□□□□□ -0.55
VAMP7-201ENST00000262640 ZNF670-ZNF695F2Z2N8 137 aa11.59□□□□□ -0.55
VAMP7-201ENST00000262640 ATE1O95260 518 aa11.59□□□□□ -0.55
VAMP7-201ENST00000262640 NR2C1P13056 603 aa11.59□□□□□ -0.55
VAMP7-201ENST00000262640 GADD45AP24522 165 aa11.59□□□□□ -0.55
VAMP7-201ENST00000262640 HCCSP53701 268 aa11.59□□□□□ -0.55
VAMP7-201ENST00000262640 CLDN17P56750 224 aa11.59□□□□□ -0.55
VAMP7-201ENST00000262640 RPS3AP61247 264 aaKnown RBP11.59□□□□□ -0.55
VAMP7-201ENST00000262640 TPBGQ13641 420 aa11.59□□□□□ -0.55
VAMP7-201ENST00000262640 RNFT1Q5M7Z0 435 aa11.59□□□□□ -0.55
VAMP7-201ENST00000262640 ABLIM2Q6H8Q1 611 aa11.59□□□□□ -0.55
VAMP7-201ENST00000262640 ATCAYQ86WG3 371 aa11.59□□□□□ -0.55
VAMP7-201ENST00000262640 SYS1Q8N2H4 156 aa11.59□□□□□ -0.55
VAMP7-201ENST00000262640 UFD1Q92890 307 aa11.59□□□□□ -0.55
VAMP7-201ENST00000262640 TIMP4Q99727 224 aa11.59□□□□□ -0.55
VAMP7-201ENST00000262640 DEFB127Q9H1M4 99 aa11.59□□□□□ -0.55
VAMP7-201ENST00000262640 LDAHQ9H6V9 325 aa11.59□□□□□ -0.55
VAMP7-201ENST00000262640 ISG20L2Q9H9L3 353 aaKnown RBP11.59□□□□□ -0.55
VAMP7-201ENST00000262640 NDUFB11Q9NX14 153 aa11.59□□□□□ -0.55
VAMP7-201ENST00000262640 PAQR5Q9NXK6 330 aaPredicted RBP11.59□□□□□ -0.55
VAMP7-201ENST00000262640 BABAM2Q9NXR7 383 aa11.59□□□□□ -0.55
VAMP7-201ENST00000262640 TFECO14948 347 aaPredicted RBP11.59□□□□□ -0.55
VAMP7-201ENST00000262640 SLC22A1O15245 554 aa11.59□□□□□ -0.55
VAMP7-201ENST00000262640 AIREO43918 545 aa11.59□□□□□ -0.55
VAMP7-201ENST00000262640 HLA-DQA2P01906 255 aa11.59□□□□□ -0.55
VAMP7-201ENST00000262640 ZNF24P17028 368 aa11.59□□□□□ -0.55
VAMP7-201ENST00000262640 PTGS2P35354 604 aa11.59□□□□□ -0.55
VAMP7-201ENST00000262640 FMODQ06828 376 aa11.59□□□□□ -0.55
VAMP7-201ENST00000262640 CAMK2DQ13557 499 aa11.59□□□□□ -0.55
VAMP7-201ENST00000262640 SSX6Q7RTT6 188 aa11.59□□□□□ -0.55
VAMP7-201ENST00000262640 CDC20BQ86Y33 519 aa11.59□□□□□ -0.55
VAMP7-201ENST00000262640 PHC2Q8IXK0 858 aa11.59□□□□□ -0.55
VAMP7-201ENST00000262640 EXO5Q9H790 373 aa11.59□□□□□ -0.55
VAMP7-201ENST00000262640 WDR76Q9H967 626 aa11.59□□□□□ -0.55
VAMP7-201ENST00000262640 COA3Q9Y2R0 106 aaPredicted RBP11.59□□□□□ -0.55
VAMP7-201ENST00000262640 TMEM14AQ9Y6G1 99 aa11.59□□□□□ -0.55
VAMP7-201ENST00000262640 TRGV5A0A0B4J1U4 118 aa11.58□□□□□ -0.56
VAMP7-201ENST00000262640 ITGB2P05107 769 aa11.58□□□□□ -0.56
VAMP7-201ENST00000262640 NR4A1P22736 598 aa11.58□□□□□ -0.56
VAMP7-201ENST00000262640 PMP22Q01453 160 aa11.58□□□□□ -0.56
VAMP7-201ENST00000262640 ZNF169Q14929 603 aaPredicted RBP11.58□□□□□ -0.56
VAMP7-201ENST00000262640 ETFDHQ16134 617 aa11.58□□□□□ -0.56
VAMP7-201ENST00000262640 CDONQ4KMG0 1287 aa11.58□□□□□ -0.56
VAMP7-201ENST00000262640 LIPKQ5VXJ0 399 aa11.58□□□□□ -0.56
VAMP7-201ENST00000262640 VASNQ6EMK4 673 aa11.58□□□□□ -0.56
VAMP7-201ENST00000262640 KLBQ86Z14 1044 aa11.58□□□□□ -0.56
VAMP7-201ENST00000262640 OR6N2Q8NGY6 317 aa11.58□□□□□ -0.56
VAMP7-201ENST00000262640 SNX33Q8WV41 574 aa11.58□□□□□ -0.56
VAMP7-201ENST00000262640 C4orf36Q96KX1 117 aa11.58□□□□□ -0.56
VAMP7-201ENST00000262640 TRIM36Q9NQ86 728 aa11.58□□□□□ -0.56
VAMP7-201ENST00000262640 COPS3Q9UNS2 423 aa11.58□□□□□ -0.56
VAMP7-201ENST00000262640 LIPGQ9Y5X9 500 aa11.58□□□□□ -0.56
VAMP7-201ENST00000262640 MED12Q93074 2177 aa11.58□□□□□ -0.56
VAMP7-201ENST00000262640 J3QLW9 94 aa11.58□□□□□ -0.56
VAMP7-201ENST00000262640 PHYHO14832 338 aa11.58□□□□□ -0.56
VAMP7-201ENST00000262640 CYTIPO60759 359 aa11.58□□□□□ -0.56
VAMP7-201ENST00000262640 ZNF19P17023 458 aa11.58□□□□□ -0.56
VAMP7-201ENST00000262640 TAS2R43P59537 309 aa11.58□□□□□ -0.56
VAMP7-201ENST00000262640 SRYQ05066 204 aa11.58□□□□□ -0.56
VAMP7-201ENST00000262640 HIST3H3Q16695 136 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms