RNA–Protein interactions for RNA: ENST00000261415.11

COL4A3BP-201, Transcript of collagen type IV alpha 3 binding protein, humanhuman

TSL 1 (best) BASIC

Gene COL4A3BP, Length 2,262 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BP-201ENST00000261415 BEST4Q8NFU0 473 aa17.17■□□□□ 0.34
COL4A3BP-201ENST00000261415 YARS2Q9Y2Z4 477 aaKnown RBP17.17■□□□□ 0.34
COL4A3BP-201ENST00000261415 LOC102723996A0A087X1L8 192 aa17.17■□□□□ 0.34
COL4A3BP-201ENST00000261415 TMEM129A0AVI4 362 aa17.17■□□□□ 0.34
COL4A3BP-201ENST00000261415 IRGMA1A4Y4 181 aa17.17■□□□□ 0.34
COL4A3BP-201ENST00000261415 STMND1H3BQB6 276 aa17.17■□□□□ 0.34
COL4A3BP-201ENST00000261415 PEX14O75381 377 aa17.17■□□□□ 0.34
COL4A3BP-201ENST00000261415 HLA-DPB1P04440 258 aa17.17■□□□□ 0.34
COL4A3BP-201ENST00000261415 TRAM2Q15035 370 aa17.17■□□□□ 0.34
COL4A3BP-201ENST00000261415 ZSWIM7Q19AV6 140 aa17.17■□□□□ 0.34
COL4A3BP-201ENST00000261415 SLC36A2Q495M3 483 aa17.17■□□□□ 0.34
COL4A3BP-201ENST00000261415 SFRP5Q5T4F7 317 aa17.17■□□□□ 0.34
COL4A3BP-201ENST00000261415 SLC22A10Q63ZE4 541 aa17.17■□□□□ 0.34
COL4A3BP-201ENST00000261415 C9orf40Q8IXQ3 194 aa17.17■□□□□ 0.34
COL4A3BP-201ENST00000261415 AQP11Q8NBQ7 271 aa17.17■□□□□ 0.34
COL4A3BP-201ENST00000261415 OR4N2Q8NGD1 307 aa17.17■□□□□ 0.34
COL4A3BP-201ENST00000261415 NEIL3Q8TAT5 605 aa17.17■□□□□ 0.34
COL4A3BP-201ENST00000261415 CMSS1Q9BQ75 279 aaKnown RBP17.17■□□□□ 0.34
COL4A3BP-201ENST00000261415 ZNF350Q9GZX5 532 aa17.17■□□□□ 0.34
COL4A3BP-201ENST00000261415 Q9N2J8 555 aa17.17■□□□□ 0.34
COL4A3BP-201ENST00000261415 RPS6KB2Q9UBS0 482 aa17.17■□□□□ 0.34
COL4A3BP-201ENST00000261415 MRTO4Q9UKD2 239 aaKnown RBP17.17■□□□□ 0.34
COL4A3BP-201ENST00000261415 TCFL5Q9UL49 500 aa17.17■□□□□ 0.34
COL4A3BP-201ENST00000261415 CBLCQ9ULV8 474 aa17.17■□□□□ 0.34
COL4A3BP-201ENST00000261415 SLC9A8Q9Y2E8 581 aa17.17■□□□□ 0.34
COL4A3BP-201ENST00000261415 GPR55Q9Y2T6 319 aaPredicted RBP17.17■□□□□ 0.34
COL4A3BP-201ENST00000261415 WDR45Q9Y484 360 aa17.17■□□□□ 0.34
COL4A3BP-201ENST00000261415 DCHS1Q96JQ0 3298 aa17.16■□□□□ 0.34
COL4A3BP-201ENST00000261415 ZNF729A6NN14 1252 aaPredicted RBP17.16■□□□□ 0.34
COL4A3BP-201ENST00000261415 HMSDA8MTL9 139 aa17.16■□□□□ 0.34
COL4A3BP-201ENST00000261415 TFPIP10646 304 aa17.16■□□□□ 0.34
COL4A3BP-201ENST00000261415 STAT5AP42229 794 aa17.16■□□□□ 0.34
COL4A3BP-201ENST00000261415 RPS18P62269 152 aaKnown RBP17.16■□□□□ 0.34
COL4A3BP-201ENST00000261415 SNTB1Q13884 538 aaKnown RBP17.16■□□□□ 0.34
COL4A3BP-201ENST00000261415 EBPQ15125 230 aaKnown RBP17.16■□□□□ 0.34
COL4A3BP-201ENST00000261415 RSPO4Q2I0M5 234 aaPredicted RBP17.16■□□□□ 0.34
COL4A3BP-201ENST00000261415 DHRS7BQ6IAN0 325 aaPredicted RBP17.16■□□□□ 0.34
COL4A3BP-201ENST00000261415 FIGNL1Q6PIW4 674 aa17.16■□□□□ 0.34
COL4A3BP-201ENST00000261415 GSG1LQ6UXU4 331 aa17.16■□□□□ 0.34
COL4A3BP-201ENST00000261415 HMGN2P46Q86SG4 172 aa17.16■□□□□ 0.34
COL4A3BP-201ENST00000261415 OAFQ86UD1 273 aa17.16■□□□□ 0.34
COL4A3BP-201ENST00000261415 APCDD1LQ8NCL9 501 aa17.16■□□□□ 0.34
COL4A3BP-201ENST00000261415 OR52I1Q8NGK6 324 aa17.16■□□□□ 0.34
COL4A3BP-201ENST00000261415 RSPO3Q9BXY4 272 aaPredicted RBP17.16■□□□□ 0.34
COL4A3BP-201ENST00000261415 QRSL1Q9H0R6 528 aaKnown RBP17.16■□□□□ 0.34
COL4A3BP-201ENST00000261415 HS3ST3B1Q9Y662 390 aa17.16■□□□□ 0.34
COL4A3BP-201ENST00000261415 FREM2Q5SZK8 3169 aa17.16■□□□□ 0.34
COL4A3BP-201ENST00000261415 TEX46H3BTG2 121 aa17.16■□□□□ 0.34
COL4A3BP-201ENST00000261415 ZNF593O00488 134 aaPredicted RBP17.16■□□□□ 0.34
COL4A3BP-201ENST00000261415 STX11O75558 287 aa17.16■□□□□ 0.34
COL4A3BP-201ENST00000261415 SERPINA3P01011 423 aa17.16■□□□□ 0.34
COL4A3BP-201ENST00000261415 TRHRP34981 398 aaPredicted RBP17.16■□□□□ 0.34
COL4A3BP-201ENST00000261415 LIMS1P48059 325 aa17.16■□□□□ 0.34
COL4A3BP-201ENST00000261415 RNF212Q495C1 297 aa17.16■□□□□ 0.34
COL4A3BP-201ENST00000261415 UQCC3Q6UW78 93 aa17.16■□□□□ 0.34
COL4A3BP-201ENST00000261415 TMUB2Q71RG4 321 aa17.16■□□□□ 0.34
COL4A3BP-201ENST00000261415 SKA3Q8IX90 412 aa17.16■□□□□ 0.34
COL4A3BP-201ENST00000261415 ZSCAN1Q8NBB4 408 aa17.16■□□□□ 0.34
COL4A3BP-201ENST00000261415 ADIPOR1Q96A54 375 aa17.16■□□□□ 0.34
COL4A3BP-201ENST00000261415 KCTD12Q96CX2 325 aaKnown RBP17.16■□□□□ 0.34
COL4A3BP-201ENST00000261415 GAL3ST4Q96RP7 486 aa17.16■□□□□ 0.34
COL4A3BP-201ENST00000261415 UFSP2Q9NUQ7 469 aa17.16■□□□□ 0.34
COL4A3BP-201ENST00000261415 FBXO34Q9NWN3 711 aa17.16■□□□□ 0.34
COL4A3BP-201ENST00000261415 TAS2R3Q9NYW6 316 aa17.16■□□□□ 0.34
COL4A3BP-201ENST00000261415 ZNF223Q9UK11 482 aaPredicted RBP17.16■□□□□ 0.34
COL4A3BP-201ENST00000261415 FARSAQ9Y285 508 aaKnown RBP17.16■□□□□ 0.34
COL4A3BP-201ENST00000261415 RPH3AQ9Y2J0 694 aaPredicted RBP17.16■□□□□ 0.34
COL4A3BP-201ENST00000261415 C2orf92A0A1B0GVN3 265 aa17.15■□□□□ 0.34
COL4A3BP-201ENST00000261415 ARGFXA6NJG6 315 aa17.15■□□□□ 0.34
COL4A3BP-201ENST00000261415 OR6C76A6NM76 312 aa17.15■□□□□ 0.34
COL4A3BP-201ENST00000261415 TTLL8A6PVC2 850 aa17.15■□□□□ 0.34
COL4A3BP-201ENST00000261415 CDRT15L2A8MXV6 281 aa17.15■□□□□ 0.34
COL4A3BP-201ENST00000261415 DISC1C4P0D8 188 aa17.15■□□□□ 0.34
COL4A3BP-201ENST00000261415 PRR23D1E9PI22 279 aaPredicted RBP17.15■□□□□ 0.34
COL4A3BP-201ENST00000261415 PRKNO60260 465 aaPredicted RBP17.15■□□□□ 0.34
COL4A3BP-201ENST00000261415 SUSD5O60279 629 aa17.15■□□□□ 0.34
COL4A3BP-201ENST00000261415 GADD45GO95257 159 aa17.15■□□□□ 0.34
COL4A3BP-201ENST00000261415 PRR23D2P0DMB1 279 aaPredicted RBP17.15■□□□□ 0.34
COL4A3BP-201ENST00000261415 OSMP13725 252 aa17.15■□□□□ 0.34
COL4A3BP-201ENST00000261415 PPICP45877 212 aa17.15■□□□□ 0.34
COL4A3BP-201ENST00000261415 CAPZA1P52907 286 aa17.15■□□□□ 0.34
COL4A3BP-201ENST00000261415 RPS15P62841 145 aaKnown RBP17.15■□□□□ 0.34
COL4A3BP-201ENST00000261415 EEF1A1P68104 462 aaKnown RBP17.15■□□□□ 0.34
COL4A3BP-201ENST00000261415 EEF1A1P5Q5VTE0 462 aa17.15■□□□□ 0.34
COL4A3BP-201ENST00000261415 SLC6A19Q695T7 634 aa17.15■□□□□ 0.34
COL4A3BP-201ENST00000261415 SLC29A4Q7RTT9 530 aa17.15■□□□□ 0.34
COL4A3BP-201ENST00000261415 BPIFCQ8NFQ6 507 aa17.15■□□□□ 0.34
COL4A3BP-201ENST00000261415 ORAI1Q96D31 301 aa17.15■□□□□ 0.34
COL4A3BP-201ENST00000261415 ZG16BQ96DA0 208 aa17.15■□□□□ 0.34
COL4A3BP-201ENST00000261415 TSNAXQ99598 290 aaKnown RBP17.15■□□□□ 0.34
COL4A3BP-201ENST00000261415 NPDC1Q9NQX5 325 aaPredicted RBP17.15■□□□□ 0.34
COL4A3BP-201ENST00000261415 OR10H1Q9Y4A9 318 aa17.15■□□□□ 0.34
COL4A3BP-201ENST00000261415 CHST2Q9Y4C5 530 aa17.15■□□□□ 0.34
COL4A3BP-201ENST00000261415 MMP11P24347 488 aa17.14■□□□□ 0.33
COL4A3BP-201ENST00000261415 SLC26A5P58743 744 aa17.14■□□□□ 0.33
COL4A3BP-201ENST00000261415 SEC61A1P61619 476 aaKnown RBP17.14■□□□□ 0.33
COL4A3BP-201ENST00000261415 PCOLCEQ15113 449 aa17.14■□□□□ 0.33
COL4A3BP-201ENST00000261415 C12orf73Q69YU5 71 aa17.14■□□□□ 0.33
COL4A3BP-201ENST00000261415 FAM71CQ8NEG0 241 aa17.14■□□□□ 0.33
COL4A3BP-201ENST00000261415 WWTR1Q9GZV5 400 aa17.14■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms