RNA–Protein interactions for RNA: ENST00000261037.7

COL8A1-201, Transcript of collagen type VIII alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL8A1, Length 5,705 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-201ENST00000261037 ADPRHP54922 357 aa11.13□□□□□ -0.63
COL8A1-201ENST00000261037 MYH14Q7Z406 1995 aaKnown RBP11.13□□□□□ -0.63
COL8A1-201ENST00000261037 RTN4RL1Q86UN2 441 aaPredicted RBP11.13□□□□□ -0.63
COL8A1-201ENST00000261037 SLC22A24Q8N4F4 322 aa11.13□□□□□ -0.63
COL8A1-201ENST00000261037 PPT2Q9UMR5 302 aa11.13□□□□□ -0.63
COL8A1-201ENST00000261037 DIMT1Q9UNQ2 313 aaKnown RBP11.13□□□□□ -0.63
COL8A1-201ENST00000261037 PPP3CBP16298 524 aa11.13□□□□□ -0.63
COL8A1-201ENST00000261037 BCKDHBP21953 392 aa11.13□□□□□ -0.63
COL8A1-201ENST00000261037 NPBWR1P48145 328 aa11.13□□□□□ -0.63
COL8A1-201ENST00000261037 FAM71E1Q6IPT2 247 aa11.13□□□□□ -0.63
COL8A1-201ENST00000261037 SLC37A2Q8TED4 501 aa11.13□□□□□ -0.63
COL8A1-201ENST00000261037 GPRIN2O60269 458 aa11.13□□□□□ -0.63
COL8A1-201ENST00000261037 CTNSO60931 367 aa11.13□□□□□ -0.63
COL8A1-201ENST00000261037 SIX6O95475 246 aa11.13□□□□□ -0.63
COL8A1-201ENST00000261037 FOLR1P15328 257 aa11.13□□□□□ -0.63
COL8A1-201ENST00000261037 IGFBP6P24592 240 aaPredicted RBP11.13□□□□□ -0.63
COL8A1-201ENST00000261037 MTNR1BP49286 362 aa11.13□□□□□ -0.63
COL8A1-201ENST00000261037 CYB561P49447 251 aa11.13□□□□□ -0.63
COL8A1-201ENST00000261037 GNB1P62873 340 aa11.13□□□□□ -0.63
COL8A1-201ENST00000261037 BTN1A1Q13410 526 aa11.13□□□□□ -0.63
COL8A1-201ENST00000261037 ZNF687Q8N1G0 1237 aa11.13□□□□□ -0.63
COL8A1-201ENST00000261037 FAM71CQ8NEG0 241 aa11.13□□□□□ -0.63
COL8A1-201ENST00000261037 OR51D1Q8NGF3 324 aa11.13□□□□□ -0.63
COL8A1-201ENST00000261037 MFRPQ9BY79 579 aa11.13□□□□□ -0.63
COL8A1-201ENST00000261037 C20orf85Q9H1P6 137 aa11.13□□□□□ -0.63
COL8A1-201ENST00000261037 TBC1D29Q9UFV1 150 aa11.13□□□□□ -0.63
COL8A1-201ENST00000261037 SLC5A10A0PJK1 596 aa11.12□□□□□ -0.63
COL8A1-201ENST00000261037 TMEM221A6NGB7 291 aa11.12□□□□□ -0.63
COL8A1-201ENST00000261037 B4GALT3O60512 393 aa11.12□□□□□ -0.63
COL8A1-201ENST00000261037 PAPLNO95428 1278 aa11.12□□□□□ -0.63
COL8A1-201ENST00000261037 SCGB1D1O95968 90 aa11.12□□□□□ -0.63
COL8A1-201ENST00000261037 TESK1Q15569 626 aa11.12□□□□□ -0.63
COL8A1-201ENST00000261037 CLVS2Q5SYC1 327 aa11.12□□□□□ -0.63
COL8A1-201ENST00000261037 HENMT1Q5T8I9 393 aaKnown RBP11.12□□□□□ -0.63
COL8A1-201ENST00000261037 NKAIN4Q8IVV8 208 aa11.12□□□□□ -0.63
COL8A1-201ENST00000261037 ZADH2Q8N4Q0 377 aa11.12□□□□□ -0.63
COL8A1-201ENST00000261037 ZNF454Q8N9F8 522 aa11.12□□□□□ -0.63
COL8A1-201ENST00000261037 OR56B4Q8NH76 319 aa11.12□□□□□ -0.63
COL8A1-201ENST00000261037 RHOXF1Q8NHV9 184 aa11.12□□□□□ -0.63
COL8A1-201ENST00000261037 KCNG3Q8TAE7 436 aa11.12□□□□□ -0.63
COL8A1-201ENST00000261037 WBP2Q969T9 261 aa11.12□□□□□ -0.63
COL8A1-201ENST00000261037 ABLIM3O94929 683 aa11.12□□□□□ -0.63
COL8A1-201ENST00000261037 DUSP5Q16690 384 aa11.12□□□□□ -0.63
COL8A1-201ENST00000261037 TMEM178AQ8NBL3 297 aa11.12□□□□□ -0.63
COL8A1-201ENST00000261037 FAM3DQ96BQ1 224 aa11.12□□□□□ -0.63
COL8A1-201ENST00000261037 TSSK2Q96PF2 358 aa11.12□□□□□ -0.63
COL8A1-201ENST00000261037 UBL7Q96S82 380 aaPredicted RBP11.12□□□□□ -0.63
COL8A1-201ENST00000261037 KLRC4-KLRK1H3BQV0 150 aa11.12□□□□□ -0.63
COL8A1-201ENST00000261037 IGFBP1P08833 259 aaPredicted RBP11.12□□□□□ -0.63
COL8A1-201ENST00000261037 CR2P20023 1033 aa11.12□□□□□ -0.63
COL8A1-201ENST00000261037 ANXA7P20073 488 aaKnown RBP11.12□□□□□ -0.63
COL8A1-201ENST00000261037 EPHA5P54756 1037 aa11.12□□□□□ -0.63
COL8A1-201ENST00000261037 CDONQ4KMG0 1287 aa11.12□□□□□ -0.63
COL8A1-201ENST00000261037 FCRL1Q96LA6 429 aa11.12□□□□□ -0.63
COL8A1-201ENST00000261037 UHRF2Q96PU4 802 aa11.12□□□□□ -0.63
COL8A1-201ENST00000261037 ERVMER34-1Q9H9K5 563 aa11.12□□□□□ -0.63
COL8A1-201ENST00000261037 FGF22Q9HCT0 170 aa11.12□□□□□ -0.63
COL8A1-201ENST00000261037 MMACHCQ9Y4U1 282 aa11.12□□□□□ -0.63
COL8A1-201ENST00000261037 CCSO14618 274 aa11.12□□□□□ -0.63
COL8A1-201ENST00000261037 LCMT2O60294 686 aaKnown RBP11.12□□□□□ -0.63
COL8A1-201ENST00000261037 DEFA4P12838 97 aa11.12□□□□□ -0.63
COL8A1-201ENST00000261037 NAGAP17050 411 aa11.12□□□□□ -0.63
COL8A1-201ENST00000261037 HNRNPFP52597 415 aaKnown RBP11.12□□□□□ -0.63
COL8A1-201ENST00000261037 RACK1P63244 317 aaKnown RBP11.12□□□□□ -0.63
COL8A1-201ENST00000261037 ZNF92Q03936 586 aa11.12□□□□□ -0.63
COL8A1-201ENST00000261037 RUNX2Q13950 521 aa11.12□□□□□ -0.63
COL8A1-201ENST00000261037 SHHQ15465 462 aa11.12□□□□□ -0.63
COL8A1-201ENST00000261037 IL34Q6ZMJ4 242 aa11.12□□□□□ -0.63
COL8A1-201ENST00000261037 OR10K1Q8NGX5 313 aa11.12□□□□□ -0.63
COL8A1-201ENST00000261037 ABHD6Q9BV23 337 aa11.12□□□□□ -0.63
COL8A1-201ENST00000261037 ACOXLQ9NUZ1 547 aa11.12□□□□□ -0.63
COL8A1-201ENST00000261037 CACNA1SQ13698 1873 aa11.12□□□□□ -0.63
COL8A1-201ENST00000261037 COL22A1Q8NFW1 1626 aaPredicted RBP11.12□□□□□ -0.63
COL8A1-201ENST00000261037 LRIT2A6NDA9 550 aa11.12□□□□□ -0.63
COL8A1-201ENST00000261037 EDIL3O43854 480 aa11.12□□□□□ -0.63
COL8A1-201ENST00000261037 KCNK2O95069 426 aa11.12□□□□□ -0.63
COL8A1-201ENST00000261037 PRKACAP17612 351 aa11.12□□□□□ -0.63
COL8A1-201ENST00000261037 SRMP19623 302 aa11.12□□□□□ -0.63
COL8A1-201ENST00000261037 CD27P26842 260 aa11.12□□□□□ -0.63
COL8A1-201ENST00000261037 RPL11P62913 178 aaKnown RBP11.12□□□□□ -0.63
COL8A1-201ENST00000261037 TEKQ02763 1124 aa11.12□□□□□ -0.63
COL8A1-201ENST00000261037 ACSM1Q08AH1 577 aa11.12□□□□□ -0.63
COL8A1-201ENST00000261037 ZNF77Q15935 545 aa11.12□□□□□ -0.63
COL8A1-201ENST00000261037 ARHGAP11BQ3KRB8 267 aa11.12□□□□□ -0.63
COL8A1-201ENST00000261037 STEAP1BQ6NZ63 245 aa11.12□□□□□ -0.63
COL8A1-201ENST00000261037 C5orf46Q6UWT4 87 aa11.12□□□□□ -0.63
COL8A1-201ENST00000261037 RSPO2Q6UXX9 243 aaPredicted RBP11.12□□□□□ -0.63
COL8A1-201ENST00000261037 PGAP1Q75T13 922 aa11.12□□□□□ -0.63
COL8A1-201ENST00000261037 C8orf44Q96CB5 159 aa11.12□□□□□ -0.63
COL8A1-201ENST00000261037 SEC22CQ9BRL7 303 aa11.12□□□□□ -0.63
COL8A1-201ENST00000261037 NT5DC2Q9H857 520 aa11.12□□□□□ -0.63
COL8A1-201ENST00000261037 PURGQ9UJV8 347 aaKnown RBP11.12□□□□□ -0.63
COL8A1-201ENST00000261037 PADI1Q9ULC6 663 aa11.12□□□□□ -0.63
COL8A1-201ENST00000261037 MRPS2Q9Y399 296 aaKnown RBP11.12□□□□□ -0.63
COL8A1-201ENST00000261037 SLC2A10O95528 541 aa11.11□□□□□ -0.63
COL8A1-201ENST00000261037 CBR1P16152 277 aa11.11□□□□□ -0.63
COL8A1-201ENST00000261037 MMP11P24347 488 aa11.11□□□□□ -0.63
COL8A1-201ENST00000261037 OPCMLQ14982 345 aa11.11□□□□□ -0.63
COL8A1-201ENST00000261037 ZNF468Q5VIY5 522 aaPredicted RBP11.11□□□□□ -0.63
COL8A1-201ENST00000261037 C6orf15Q6UXA7 325 aaPredicted RBP11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms