RNA–Protein interactions for RNA: ENST00000258781.10

CCM2-201, Transcript of CCM2 scaffold protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CCM2, Length 1,894 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-201ENST00000258781 LAX1Q8IWV1 398 aa24.83■■□□□ 1.56
CCM2-201ENST00000258781 MINDY2Q8NBR6 621 aa24.83■■□□□ 1.56
CCM2-201ENST00000258781 OR6N2Q8NGY6 317 aa24.83■■□□□ 1.56
CCM2-201ENST00000258781 C5orf34Q96MH7 638 aa24.83■■□□□ 1.56
CCM2-201ENST00000258781 P4HTMQ9NXG6 502 aa24.83■■□□□ 1.56
CCM2-201ENST00000258781 KLHDC2Q9Y2U9 406 aa24.83■■□□□ 1.56
CCM2-201ENST00000258781 PRR32B1ATL7 298 aa24.82■■□□□ 1.56
CCM2-201ENST00000258781 SNX4O95219 450 aa24.82■■□□□ 1.56
CCM2-201ENST00000258781 CALRP27797 417 aaKnown RBP24.82■■□□□ 1.56
CCM2-201ENST00000258781 HSF1Q00613 529 aa24.82■■□□□ 1.56
CCM2-201ENST00000258781 SNX29P2Q8IUI4 249 aa24.82■■□□□ 1.56
CCM2-201ENST00000258781 GTPBP8Q8N3Z3 284 aaPredicted RBP24.82■■□□□ 1.56
CCM2-201ENST00000258781 COX4I2Q96KJ9 171 aa24.82■■□□□ 1.56
CCM2-201ENST00000258781 LAMP5Q9UJQ1 280 aa24.82■■□□□ 1.56
CCM2-201ENST00000258781 DOCK10Q96BY6 2186 aa24.81■■□□□ 1.56
CCM2-201ENST00000258781 TRBV2A0A0J9YWF9 115 aa24.81■■□□□ 1.56
CCM2-201ENST00000258781 SLC16A7O60669 478 aa24.81■■□□□ 1.56
CCM2-201ENST00000258781 LIFP15018 202 aa24.81■■□□□ 1.56
CCM2-201ENST00000258781 ACSM3Q53FZ2 586 aa24.81■■□□□ 1.56
CCM2-201ENST00000258781 TPRA1Q86W33 373 aa24.81■■□□□ 1.56
CCM2-201ENST00000258781 CCDC86Q9H6F5 360 aaKnown RBP24.81■■□□□ 1.56
CCM2-201ENST00000258781 DAPK2Q9UIK4 370 aa24.81■■□□□ 1.56
CCM2-201ENST00000258781 TRAPPC4Q9Y296 219 aa24.81■■□□□ 1.56
CCM2-201ENST00000258781 HDGFL3Q9Y3E1 203 aa24.81■■□□□ 1.56
CCM2-201ENST00000258781 SMIM30A4D0T7 59 aa24.81■■□□□ 1.56
CCM2-201ENST00000258781 ALOX5APP20292 161 aa24.81■■□□□ 1.56
CCM2-201ENST00000258781 MYL9P24844 172 aa24.81■■□□□ 1.56
CCM2-201ENST00000258781 CAV3P56539 151 aa24.81■■□□□ 1.56
CCM2-201ENST00000258781 EGR3Q06889 387 aa24.81■■□□□ 1.56
CCM2-201ENST00000258781 SLC35D2Q76EJ3 337 aa24.81■■□□□ 1.56
CCM2-201ENST00000258781 KDM8Q8N371 416 aa24.81■■□□□ 1.56
CCM2-201ENST00000258781 TMEM41AQ96HV5 264 aa24.81■■□□□ 1.56
CCM2-201ENST00000258781 CCDC32Q9BV29 185 aa24.81■■□□□ 1.56
CCM2-201ENST00000258781 RNF32Q9H0A6 362 aa24.81■■□□□ 1.56
CCM2-201ENST00000258781 MIXL1Q9H2W2 232 aa24.81■■□□□ 1.56
CCM2-201ENST00000258781 ABCB9Q9NP78 766 aa24.81■■□□□ 1.56
CCM2-201ENST00000258781 IFNGR1P15260 489 aa24.8■■□□□ 1.56
CCM2-201ENST00000258781 DSCR4P56555 118 aaPredicted RBP24.8■■□□□ 1.56
CCM2-201ENST00000258781 OXA1LQ15070 435 aa24.8■■□□□ 1.56
CCM2-201ENST00000258781 OR5M1Q8NGP8 315 aa24.8■■□□□ 1.56
CCM2-201ENST00000258781 ADAMTS17Q8TE56 1095 aa24.8■■□□□ 1.56
CCM2-201ENST00000258781 ABCB10Q9NRK6 738 aa24.8■■□□□ 1.56
CCM2-201ENST00000258781 MRM2Q9UI43 246 aaKnown RBP24.8■■□□□ 1.56
CCM2-201ENST00000258781 RPH3AQ9Y2J0 694 aaPredicted RBP24.8■■□□□ 1.56
CCM2-201ENST00000258781 hCG_2014768A0A024R1R8 64 aa24.79■■□□□ 1.56
CCM2-201ENST00000258781 HSPB2A8KAH6 182 aa24.79■■□□□ 1.56
CCM2-201ENST00000258781 CENPBD1B2RD01 187 aa24.79■■□□□ 1.56
CCM2-201ENST00000258781 TBX1O43435 398 aa24.79■■□□□ 1.56
CCM2-201ENST00000258781 GATBO75879 557 aaKnown RBP24.79■■□□□ 1.56
CCM2-201ENST00000258781 ABHD16AO95870 558 aa24.79■■□□□ 1.56
CCM2-201ENST00000258781 KRT8P05787 483 aa24.79■■□□□ 1.56
CCM2-201ENST00000258781 CTLA4P16410 223 aa24.79■■□□□ 1.56
CCM2-201ENST00000258781 TCEA1P23193 301 aaKnown RBP24.79■■□□□ 1.56
CCM2-201ENST00000258781 DPP4P27487 766 aa24.79■■□□□ 1.56
CCM2-201ENST00000258781 PSMB10P40306 273 aa24.79■■□□□ 1.56
CCM2-201ENST00000258781 FOXK1P85037 733 aa24.79■■□□□ 1.56
CCM2-201ENST00000258781 POU3F1Q03052 451 aaPredicted RBP24.79■■□□□ 1.56
CCM2-201ENST00000258781 HSPB2Q16082 182 aa24.79■■□□□ 1.56
CCM2-201ENST00000258781 TRIM16LQ309B1 348 aa24.79■■□□□ 1.56
CCM2-201ENST00000258781 DNM1P34Q6PK57 102 aa24.79■■□□□ 1.56
CCM2-201ENST00000258781 DPY19L4Q7Z388 723 aa24.79■■□□□ 1.56
CCM2-201ENST00000258781 LYSMD2Q8IV50 215 aa24.79■■□□□ 1.56
CCM2-201ENST00000258781 OR1J4Q8NGS1 313 aa24.79■■□□□ 1.56
CCM2-201ENST00000258781 OTOSQ8NHW6 89 aa24.79■■□□□ 1.56
CCM2-201ENST00000258781 ATF6BQ99941 703 aa24.79■■□□□ 1.56
CCM2-201ENST00000258781 PPIL3Q9H2H8 161 aaKnown RBP24.79■■□□□ 1.56
CCM2-201ENST00000258781 SACM1LQ9NTJ5 587 aa24.79■■□□□ 1.56
CCM2-201ENST00000258781 V9GYH0 126 aa24.79■■□□□ 1.56
CCM2-201ENST00000258781 ALPK2Q86TB3 2170 aa24.79■■□□□ 1.56
CCM2-201ENST00000258781 CFAP47Q6ZTR5 3102 aa24.79■■□□□ 1.56
CCM2-201ENST00000258781 OCM2P0CE71 109 aa24.79■■□□□ 1.56
CCM2-201ENST00000258781 OCMP0CE72 109 aaPredicted RBP24.79■■□□□ 1.56
CCM2-201ENST00000258781 SHC1P29353 583 aa24.79■■□□□ 1.56
CCM2-201ENST00000258781 PPP3R1P63098 170 aa24.79■■□□□ 1.56
CCM2-201ENST00000258781 ZNF239Q16600 458 aaKnown RBP24.79■■□□□ 1.56
CCM2-201ENST00000258781 ZMAT1Q5H9K5 638 aa24.79■■□□□ 1.56
CCM2-201ENST00000258781 ZNF468Q5VIY5 522 aaPredicted RBP24.79■■□□□ 1.56
CCM2-201ENST00000258781 TIGD3Q6B0B8 471 aa24.79■■□□□ 1.56
CCM2-201ENST00000258781 TRILQ7L0X0 811 aa24.79■■□□□ 1.56
CCM2-201ENST00000258781 RNF166Q96A37 237 aaPredicted RBP24.79■■□□□ 1.56
CCM2-201ENST00000258781 OR5B2Q96R09 309 aa24.79■■□□□ 1.56
CCM2-201ENST00000258781 KCNK17Q96T54 332 aa24.79■■□□□ 1.56
CCM2-201ENST00000258781 SEC14L5O43304 696 aa24.78■■□□□ 1.56
CCM2-201ENST00000258781 UPK3AO75631 287 aa24.78■■□□□ 1.56
CCM2-201ENST00000258781 NCR1O76036 304 aa24.78■■□□□ 1.56
CCM2-201ENST00000258781 OR8G3PP0DMU2 310 aa24.78■■□□□ 1.56
CCM2-201ENST00000258781 MZT2AQ6P582 158 aa24.78■■□□□ 1.56
CCM2-201ENST00000258781 YIPF7Q8N8F6 280 aa24.78■■□□□ 1.56
CCM2-201ENST00000258781 ACOT12Q8WYK0 555 aa24.78■■□□□ 1.56
CCM2-201ENST00000258781 PHYHIPQ92561 330 aa24.78■■□□□ 1.56
CCM2-201ENST00000258781 TMEM185BQ9H7F4 350 aa24.78■■□□□ 1.56
CCM2-201ENST00000258781 FAIMQ9NVQ4 179 aa24.78■■□□□ 1.56
CCM2-201ENST00000258781 TBCCD1Q9NVR7 557 aa24.78■■□□□ 1.56
CCM2-201ENST00000258781 LOC400499M0QZD8 3231 aa24.77■■□□□ 1.56
CCM2-201ENST00000258781 GPANK1O95872 356 aa24.77■■□□□ 1.56
CCM2-201ENST00000258781 HLA-DQA2P01906 255 aa24.77■■□□□ 1.56
CCM2-201ENST00000258781 OR2B6P58173 313 aa24.77■■□□□ 1.56
CCM2-201ENST00000258781 RPS11P62280 158 aaKnown RBP eCLIP24.77■■□□□ 1.56
CCM2-201ENST00000258781 RAB43Q86YS6 212 aa24.77■■□□□ 1.56
CCM2-201ENST00000258781 OR13C5Q8NGS8 318 aa24.77■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms