RNA–Protein interactions for RNA: ENST00000250448.2

FOXA1-201, Transcript of forkhead box A1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FOXA1, Length 2,862 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA1-201ENST00000250448 EVA1AQ9H8M9 152 aa15.42■□□□□ 0.06
FOXA1-201ENST00000250448 CAPN10Q9HC96 672 aa15.42■□□□□ 0.06
FOXA1-201ENST00000250448 LYRM4Q9HD34 91 aa15.42■□□□□ 0.06
FOXA1-201ENST00000250448 POLE3Q9NRF9 147 aa15.42■□□□□ 0.06
FOXA1-201ENST00000250448 PLCL2Q9UPR0 1127 aa15.42■□□□□ 0.06
FOXA1-201ENST00000250448 ADAM18Q9Y3Q7 739 aa15.42■□□□□ 0.06
FOXA1-201ENST00000250448 SESN1Q9Y6P5 492 aa15.42■□□□□ 0.06
FOXA1-201ENST00000250448 SNRPGP15A8MWD9 76 aa15.42■□□□□ 0.06
FOXA1-201ENST00000250448 IDSB3KWA1 339 aa15.42■□□□□ 0.06
FOXA1-201ENST00000250448 NDUFB6O95139 128 aa15.42■□□□□ 0.06
FOXA1-201ENST00000250448 RAB40ALP0C0E4 278 aa15.42■□□□□ 0.06
FOXA1-201ENST00000250448 NUP62P37198 522 aaPredicted RBP15.42■□□□□ 0.06
FOXA1-201ENST00000250448 ACAA2P42765 397 aaKnown RBP15.42■□□□□ 0.06
FOXA1-201ENST00000250448 TRIM61Q5EBN2 209 aa15.42■□□□□ 0.06
FOXA1-201ENST00000250448 TCEAL6Q6IPX3 200 aa15.42■□□□□ 0.06
FOXA1-201ENST00000250448 RCBTB1Q8NDN9 531 aa15.42■□□□□ 0.06
FOXA1-201ENST00000250448 RAB40AQ8WXH6 277 aa15.42■□□□□ 0.06
FOXA1-201ENST00000250448 TCEAL3Q969E4 200 aa15.42■□□□□ 0.06
FOXA1-201ENST00000250448 WDR89Q96FK6 387 aaPredicted RBP15.42■□□□□ 0.06
FOXA1-201ENST00000250448 KLHL15Q96M94 604 aa15.42■□□□□ 0.06
FOXA1-201ENST00000250448 MED9Q9NWA0 146 aa15.42■□□□□ 0.06
FOXA1-201ENST00000250448 DNAJB12Q9NXW2 375 aaKnown RBP15.42■□□□□ 0.06
FOXA1-201ENST00000250448 DHCR7Q9UBM7 475 aaKnown RBP15.42■□□□□ 0.06
FOXA1-201ENST00000250448 SUSD2Q9UGT4 822 aa15.42■□□□□ 0.06
FOXA1-201ENST00000250448 ACOT7O00154 380 aa15.42■□□□□ 0.06
FOXA1-201ENST00000250448 GNB5O14775 395 aa15.42■□□□□ 0.06
FOXA1-201ENST00000250448 SRPX2O60687 465 aaPredicted RBP15.42■□□□□ 0.06
FOXA1-201ENST00000250448 TMEM127O75204 238 aa15.42■□□□□ 0.06
FOXA1-201ENST00000250448 SERPINI2O75830 405 aa15.42■□□□□ 0.06
FOXA1-201ENST00000250448 SNAPC5O75971 98 aa15.42■□□□□ 0.06
FOXA1-201ENST00000250448 CT62P0C5K7 136 aa15.42■□□□□ 0.06
FOXA1-201ENST00000250448 FOLR1P15328 257 aa15.42■□□□□ 0.06
FOXA1-201ENST00000250448 POU3F2P20265 443 aaPredicted RBP15.42■□□□□ 0.06
FOXA1-201ENST00000250448 CDK2P24941 298 aa15.42■□□□□ 0.06
FOXA1-201ENST00000250448 PRICKLE4Q2TBC4 344 aa15.42■□□□□ 0.06
FOXA1-201ENST00000250448 MANEAQ5SRI9 462 aa15.42■□□□□ 0.06
FOXA1-201ENST00000250448 NHLRC1Q6VVB1 395 aa15.42■□□□□ 0.06
FOXA1-201ENST00000250448 OR6K6Q8NGW6 343 aa15.42■□□□□ 0.06
FOXA1-201ENST00000250448 ZDHHC19Q8WVZ1 309 aaPredicted RBP15.42■□□□□ 0.06
FOXA1-201ENST00000250448 LY6G6EA0A0G2JKS1 128 aa15.41■□□□□ 0.06
FOXA1-201ENST00000250448 SUSD5O60279 629 aa15.41■□□□□ 0.06
FOXA1-201ENST00000250448 NMBP08949 121 aa15.41■□□□□ 0.06
FOXA1-201ENST00000250448 CALCBP10092 127 aa15.41■□□□□ 0.06
FOXA1-201ENST00000250448 SPI1P17947 270 aa15.41■□□□□ 0.06
FOXA1-201ENST00000250448 MECP2P51608 486 aaKnown RBP15.41■□□□□ 0.06
FOXA1-201ENST00000250448 NANOS3P60323 173 aaKnown RBP15.41■□□□□ 0.06
FOXA1-201ENST00000250448 RPS15P62841 145 aaKnown RBP15.41■□□□□ 0.06
FOXA1-201ENST00000250448 BTG2P78543 158 aa15.41■□□□□ 0.06
FOXA1-201ENST00000250448 RGS7BPQ6MZT1 257 aaPredicted RBP15.41■□□□□ 0.06
FOXA1-201ENST00000250448 HAVCR1Q96D42 359 aa15.41■□□□□ 0.06
FOXA1-201ENST00000250448 MRI1Q9BV20 369 aa15.41■□□□□ 0.06
FOXA1-201ENST00000250448 EPHA6Q9UF33 1036 aa15.41■□□□□ 0.06
FOXA1-201ENST00000250448 U3KQA8 63 aa15.41■□□□□ 0.06
FOXA1-201ENST00000250448 SPACA6W5XKT8 324 aa15.41■□□□□ 0.06
FOXA1-201ENST00000250448 TGFBR3LH3BV60 316 aa15.41■□□□□ 0.06
FOXA1-201ENST00000250448 IMPA2O14732 288 aa15.41■□□□□ 0.06
FOXA1-201ENST00000250448 RPL4P36578 427 aaKnown RBP15.41■□□□□ 0.06
FOXA1-201ENST00000250448 OR1D4P47884 311 aa15.41■□□□□ 0.06
FOXA1-201ENST00000250448 TAS2R20P59543 309 aa15.41■□□□□ 0.06
FOXA1-201ENST00000250448 MGAT2Q10469 447 aa15.41■□□□□ 0.06
FOXA1-201ENST00000250448 SFRP5Q5T4F7 317 aa15.41■□□□□ 0.06
FOXA1-201ENST00000250448 TTLL10Q6ZVT0 673 aa15.41■□□□□ 0.06
FOXA1-201ENST00000250448 ZBTB44Q8NCP5 570 aa15.41■□□□□ 0.06
FOXA1-201ENST00000250448 ZPLD1Q8TCW7 415 aa15.41■□□□□ 0.06
FOXA1-201ENST00000250448 SGTBQ96EQ0 304 aa15.41■□□□□ 0.06
FOXA1-201ENST00000250448 ZNF578Q96N58 590 aaPredicted RBP15.41■□□□□ 0.06
FOXA1-201ENST00000250448 NMNAT3Q96T66 252 aa15.41■□□□□ 0.06
FOXA1-201ENST00000250448 PSMD9O00233 223 aa15.4■□□□□ 0.06
FOXA1-201ENST00000250448 ZFPL1O95159 310 aa15.4■□□□□ 0.06
FOXA1-201ENST00000250448 GRPRP30550 384 aa15.4■□□□□ 0.06
FOXA1-201ENST00000250448 HLXQ14774 488 aaPredicted RBP15.4■□□□□ 0.06
FOXA1-201ENST00000250448 SLC35D3Q5M8T2 416 aa15.4■□□□□ 0.06
FOXA1-201ENST00000250448 ZC3H14Q6PJT7 736 aaKnown RBP15.4■□□□□ 0.06
FOXA1-201ENST00000250448 OVCH2Q7RTZ1 564 aa15.4■□□□□ 0.06
FOXA1-201ENST00000250448 PLXDC1Q8IUK5 500 aa15.4■□□□□ 0.06
FOXA1-201ENST00000250448 NPEPL1Q8NDH3 523 aa15.4■□□□□ 0.06
FOXA1-201ENST00000250448 ANKRD9Q96BM1 317 aaPredicted RBP15.4■□□□□ 0.06
FOXA1-201ENST00000250448 PPM1BO75688 479 aa15.4■□□□□ 0.06
FOXA1-201ENST00000250448 NKX2-2O95096 273 aa15.4■□□□□ 0.06
FOXA1-201ENST00000250448 GPR75O95800 540 aa15.4■□□□□ 0.06
FOXA1-201ENST00000250448 MNDAP41218 407 aa15.4■□□□□ 0.06
FOXA1-201ENST00000250448 ART1P52961 327 aa15.4■□□□□ 0.06
FOXA1-201ENST00000250448 RAB38P57729 211 aa15.4■□□□□ 0.06
FOXA1-201ENST00000250448 HSD11B2P80365 405 aa15.4■□□□□ 0.06
FOXA1-201ENST00000250448 CBFBQ13951 182 aa15.4■□□□□ 0.06
FOXA1-201ENST00000250448 LINC00114Q6XXX2 140 aa15.4■□□□□ 0.06
FOXA1-201ENST00000250448 OR6M1Q8NGM8 313 aa15.4■□□□□ 0.06
FOXA1-201ENST00000250448 OR1L3Q8NH93 324 aa15.4■□□□□ 0.06
FOXA1-201ENST00000250448 NSMAFQ92636 917 aa15.4■□□□□ 0.06
FOXA1-201ENST00000250448 MIB2Q96AX9 1013 aa15.4■□□□□ 0.06
FOXA1-201ENST00000250448 TSPAN10Q9H1Z9 355 aaPredicted RBP15.4■□□□□ 0.06
FOXA1-201ENST00000250448 PRR32B1ATL7 298 aa15.39■□□□□ 0.05
FOXA1-201ENST00000250448 RP2O75695 350 aa15.39■□□□□ 0.05
FOXA1-201ENST00000250448 MAOAP21397 527 aa15.39■□□□□ 0.05
FOXA1-201ENST00000250448 S100A11P31949 105 aa15.39■□□□□ 0.05
FOXA1-201ENST00000250448 SEC61A1P61619 476 aaKnown RBP15.39■□□□□ 0.05
FOXA1-201ENST00000250448 IL10RAQ13651 578 aa15.39■□□□□ 0.05
FOXA1-201ENST00000250448 KIRREL2Q6UWL6 708 aa15.39■□□□□ 0.05
FOXA1-201ENST00000250448 ZNF574Q6ZN55 896 aaPredicted RBP15.39■□□□□ 0.05
FOXA1-201ENST00000250448 DNAAF1Q8NEP3 725 aa15.39■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 66.3 ms