RNA–Protein interactions for RNA: ENST00000236192.11

VAMP4-201, Transcript of vesicle associated membrane protein 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VAMP4, Length 5,159 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4-201ENST00000236192 OR14J1Q9UGF5 321 aa11.87□□□□□ -0.51
VAMP4-201ENST00000236192 PCDHGA1Q9Y5H4 931 aa11.87□□□□□ -0.51
VAMP4-201ENST00000236192 C5orf52A6NGY3 159 aa11.86□□□□□ -0.51
VAMP4-201ENST00000236192 SULT2B1O00204 365 aa11.86□□□□□ -0.51
VAMP4-201ENST00000236192 NDUFS4O43181 175 aa11.86□□□□□ -0.51
VAMP4-201ENST00000236192 PRKRAO75569 313 aaKnown RBP11.86□□□□□ -0.51
VAMP4-201ENST00000236192 ITGA5P08648 1049 aa11.86□□□□□ -0.51
VAMP4-201ENST00000236192 CRYBB1P53674 252 aaPredicted RBP11.86□□□□□ -0.51
VAMP4-201ENST00000236192 SYPL1Q16563 259 aa11.86□□□□□ -0.51
VAMP4-201ENST00000236192 OR2G3Q8NGZ4 309 aa11.86□□□□□ -0.51
VAMP4-201ENST00000236192 LPPQ93052 612 aa11.86□□□□□ -0.51
VAMP4-201ENST00000236192 CHST8Q9H2A9 424 aa11.86□□□□□ -0.51
VAMP4-201ENST00000236192 SRA1Q9HD15 236 aaKnown RBP11.86□□□□□ -0.51
VAMP4-201ENST00000236192 TNFSF18Q9UNG2 199 aa11.86□□□□□ -0.51
VAMP4-201ENST00000236192 CLDN34H7C241 214 aa11.86□□□□□ -0.51
VAMP4-201ENST00000236192 HMGA2P52926 109 aa11.86□□□□□ -0.51
VAMP4-201ENST00000236192 SLC35A1P78382 337 aa11.86□□□□□ -0.51
VAMP4-201ENST00000236192 EXOSC6Q5RKV6 272 aaKnown RBP11.86□□□□□ -0.51
VAMP4-201ENST00000236192 RNF175Q8N4F7 328 aa11.86□□□□□ -0.51
VAMP4-201ENST00000236192 WFIKKN2Q8TEU8 576 aa11.86□□□□□ -0.51
VAMP4-201ENST00000236192 RCC2Q9P258 522 aaKnown RBP11.86□□□□□ -0.51
VAMP4-201ENST00000236192 A4GNTQ9UNA3 340 aa11.86□□□□□ -0.51
VAMP4-201ENST00000236192 USP54Q70EL1 1684 aa11.86□□□□□ -0.51
VAMP4-201ENST00000236192 XRCC3O43542 346 aa11.86□□□□□ -0.51
VAMP4-201ENST00000236192 EDN1P05305 212 aa11.86□□□□□ -0.51
VAMP4-201ENST00000236192 MUC1P15941 1255 aaPredicted RBP11.86□□□□□ -0.51
VAMP4-201ENST00000236192 TNFRSF9Q07011 255 aa11.86□□□□□ -0.51
VAMP4-201ENST00000236192 ZNF528Q3MIS6 628 aa11.86□□□□□ -0.51
VAMP4-201ENST00000236192 HLA-DQA1Q5Y7H0 255 aa11.86□□□□□ -0.51
VAMP4-201ENST00000236192 ZNF66Q6ZN08 573 aa11.86□□□□□ -0.51
VAMP4-201ENST00000236192 GTF2H5Q6ZYL4 71 aa11.86□□□□□ -0.51
VAMP4-201ENST00000236192 BPIFA2Q96DR5 249 aa11.86□□□□□ -0.51
VAMP4-201ENST00000236192 TGM7Q96PF1 710 aa11.86□□□□□ -0.51
VAMP4-201ENST00000236192 A0A0D9SEW6 157 aa11.86□□□□□ -0.51
VAMP4-201ENST00000236192 A8MXE2 369 aa11.86□□□□□ -0.51
VAMP4-201ENST00000236192 MTX2O75431 263 aa11.86□□□□□ -0.51
VAMP4-201ENST00000236192 GNRHRP30968 328 aa11.86□□□□□ -0.51
VAMP4-201ENST00000236192 GABRA2P47869 451 aa11.86□□□□□ -0.51
VAMP4-201ENST00000236192 POLR2HP52434 150 aaKnown RBP11.86□□□□□ -0.51
VAMP4-201ENST00000236192 SIM1P81133 766 aaPredicted RBP11.86□□□□□ -0.51
VAMP4-201ENST00000236192 PDE7AQ13946 482 aa11.86□□□□□ -0.51
VAMP4-201ENST00000236192 FAM58AQ8N1B3 248 aa11.86□□□□□ -0.51
VAMP4-201ENST00000236192 LMNTD1Q8N9Z9 388 aa11.86□□□□□ -0.51
VAMP4-201ENST00000236192 OR9A1PQ8NGU1 263 aa11.86□□□□□ -0.51
VAMP4-201ENST00000236192 SEMA6CQ9H3T2 930 aa11.86□□□□□ -0.51
VAMP4-201ENST00000236192 ZNF586Q9NXT0 402 aa11.86□□□□□ -0.51
VAMP4-201ENST00000236192 BET1LQ9NYM9 111 aa11.86□□□□□ -0.51
VAMP4-201ENST00000236192 USP36Q9P275 1121 aaKnown RBP11.86□□□□□ -0.51
VAMP4-201ENST00000236192 TOPAZ1Q8N9V7 1692 aa11.85□□□□□ -0.51
VAMP4-201ENST00000236192 B4E171 279 aa11.85□□□□□ -0.51
VAMP4-201ENST00000236192 SEMG1P04279 462 aa11.85□□□□□ -0.51
VAMP4-201ENST00000236192 FOLR2P14207 255 aa11.85□□□□□ -0.51
VAMP4-201ENST00000236192 MYOGP15173 224 aa11.85□□□□□ -0.51
VAMP4-201ENST00000236192 PSEN2P49810 448 aa11.85□□□□□ -0.51
VAMP4-201ENST00000236192 HABP2Q14520 560 aaPredicted RBP11.85□□□□□ -0.51
VAMP4-201ENST00000236192 PGBD5Q8N414 524 aa11.85□□□□□ -0.51
VAMP4-201ENST00000236192 OR6T1Q8NGN1 323 aa11.85□□□□□ -0.51
VAMP4-201ENST00000236192 ARRDC2Q8TBH0 407 aa11.85□□□□□ -0.51
VAMP4-201ENST00000236192 CMBLQ96DG6 245 aa11.85□□□□□ -0.51
VAMP4-201ENST00000236192 MS4A10Q96PG2 267 aa11.85□□□□□ -0.51
VAMP4-201ENST00000236192 PLEKHA2Q9HB19 425 aa11.85□□□□□ -0.51
VAMP4-201ENST00000236192 CSNK1G1Q9HCP0 422 aa11.85□□□□□ -0.51
VAMP4-201ENST00000236192 RYDENQ9NUL5 291 aaKnown RBP11.85□□□□□ -0.51
VAMP4-201ENST00000236192 LINC01387J3KSC0 135 aa11.85□□□□□ -0.51
VAMP4-201ENST00000236192 K7ERU9 68 aa11.85□□□□□ -0.51
VAMP4-201ENST00000236192 ABLIM3O94929 683 aa11.85□□□□□ -0.51
VAMP4-201ENST00000236192 HLA-HP01893 362 aa11.85□□□□□ -0.51
VAMP4-201ENST00000236192 OR4Q2P0C623 313 aa11.85□□□□□ -0.51
VAMP4-201ENST00000236192 AOAHP28039 575 aa11.85□□□□□ -0.51
VAMP4-201ENST00000236192 CTHP32929 405 aa11.85□□□□□ -0.51
VAMP4-201ENST00000236192 PXNP49023 591 aaPredicted RBP11.85□□□□□ -0.51
VAMP4-201ENST00000236192 MELKQ14680 651 aa11.85□□□□□ -0.51
VAMP4-201ENST00000236192 TMEM229BQ8NBD8 167 aa11.85□□□□□ -0.51
VAMP4-201ENST00000236192 MFSD9Q8NBP5 474 aa11.85□□□□□ -0.51
VAMP4-201ENST00000236192 SMIM19Q96E16 107 aa11.85□□□□□ -0.51
VAMP4-201ENST00000236192 SLC41A2Q96JW4 573 aa11.85□□□□□ -0.51
VAMP4-201ENST00000236192 WFIKKN1Q96NZ8 548 aa11.85□□□□□ -0.51
VAMP4-201ENST00000236192 A0A1B0GWJ7 208 aa11.85□□□□□ -0.51
VAMP4-201ENST00000236192 TMEM212A6NML5 194 aa11.85□□□□□ -0.51
VAMP4-201ENST00000236192 CDRT15L2A8MXV6 281 aa11.85□□□□□ -0.51
VAMP4-201ENST00000236192 ITGB2P05107 769 aa11.85□□□□□ -0.51
VAMP4-201ENST00000236192 HEXAP06865 529 aa11.85□□□□□ -0.51
VAMP4-201ENST00000236192 MMP2P08253 660 aa11.85□□□□□ -0.51
VAMP4-201ENST00000236192 HIST1H1BP16401 226 aaKnown RBP11.85□□□□□ -0.51
VAMP4-201ENST00000236192 FOXK2Q01167 660 aa11.85□□□□□ -0.51
VAMP4-201ENST00000236192 ELAVL2Q12926 359 aaKnown RBP11.85□□□□□ -0.51
VAMP4-201ENST00000236192 ARL6IP1Q15041 203 aa11.85□□□□□ -0.51
VAMP4-201ENST00000236192 ZNF74Q16587 644 aa11.85□□□□□ -0.51
VAMP4-201ENST00000236192 NIPAL3Q6P499 406 aa11.85□□□□□ -0.51
VAMP4-201ENST00000236192 DNM1P34Q6PK57 102 aa11.85□□□□□ -0.51
VAMP4-201ENST00000236192 MAMDC2Q7Z304 686 aaPredicted RBP11.85□□□□□ -0.51
VAMP4-201ENST00000236192 ZNF467Q7Z7K2 595 aaPredicted RBP11.85□□□□□ -0.51
VAMP4-201ENST00000236192 RNF113BQ8IZP6 322 aaKnown RBP11.85□□□□□ -0.51
VAMP4-201ENST00000236192 CCDC71LQ8N9Z2 235 aa11.85□□□□□ -0.51
VAMP4-201ENST00000236192 OR14L1PQ8NHC6 308 aa11.85□□□□□ -0.51
VAMP4-201ENST00000236192 OIT3Q8WWZ8 545 aa11.85□□□□□ -0.51
VAMP4-201ENST00000236192 SNX22Q96L94 193 aa11.85□□□□□ -0.51
VAMP4-201ENST00000236192 TEAD3Q99594 435 aa11.85□□□□□ -0.51
VAMP4-201ENST00000236192 AK3Q9UIJ7 227 aa11.85□□□□□ -0.51
VAMP4-201ENST00000236192 PIGBOS1A0A0B4J2F0 54 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms