RNA–Protein interactions for RNA: ENST00000226225.6

TNFAIP1-201, Transcript of TNF alpha induced protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFAIP1, Length 3,627 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP1-201ENST00000226225 COPS3Q9UNS2 423 aa10.62□□□□□ -0.71
TNFAIP1-201ENST00000226225 BAIAP2Q9UQB8 552 aa10.62□□□□□ -0.71
TNFAIP1-201ENST00000226225 RPH3AQ9Y2J0 694 aaPredicted RBP10.62□□□□□ -0.71
TNFAIP1-201ENST00000226225 HS3ST3B1Q9Y662 390 aa10.62□□□□□ -0.71
TNFAIP1-201ENST00000226225 DAPL1A0PJW8 107 aa10.62□□□□□ -0.71
TNFAIP1-201ENST00000226225 C9orf172C9J069 976 aa10.62□□□□□ -0.71
TNFAIP1-201ENST00000226225 PSMD9O00233 223 aa10.62□□□□□ -0.71
TNFAIP1-201ENST00000226225 ARPC5O15511 151 aa10.62□□□□□ -0.71
TNFAIP1-201ENST00000226225 OIP5O43482 229 aa10.62□□□□□ -0.71
TNFAIP1-201ENST00000226225 HIST1H2ABP04908 130 aa10.62□□□□□ -0.71
TNFAIP1-201ENST00000226225 BTCP35070 178 aa10.62□□□□□ -0.71
TNFAIP1-201ENST00000226225 GCGRP47871 477 aa10.62□□□□□ -0.71
TNFAIP1-201ENST00000226225 ZNF136P52737 540 aa10.62□□□□□ -0.71
TNFAIP1-201ENST00000226225 CLDN12P56749 244 aa10.62□□□□□ -0.71
TNFAIP1-201ENST00000226225 COL28A1Q2UY09 1125 aa10.62□□□□□ -0.71
TNFAIP1-201ENST00000226225 ULK3Q6PHR2 472 aa10.62□□□□□ -0.71
TNFAIP1-201ENST00000226225 FAM198BQ6UWH4 519 aa10.62□□□□□ -0.71
TNFAIP1-201ENST00000226225 Q6ZTK2 550 aa10.62□□□□□ -0.71
TNFAIP1-201ENST00000226225 HIST3H2AQ7L7L0 130 aa10.62□□□□□ -0.71
TNFAIP1-201ENST00000226225 RPS19BP1Q86WX3 136 aaKnown RBP10.62□□□□□ -0.71
TNFAIP1-201ENST00000226225 STPG2Q8N412 459 aa10.62□□□□□ -0.71
TNFAIP1-201ENST00000226225 OR10G3Q8NGC4 313 aa10.62□□□□□ -0.71
TNFAIP1-201ENST00000226225 HIST1H2ACQ93077 130 aa10.62□□□□□ -0.71
TNFAIP1-201ENST00000226225 ADIPOR1Q96A54 375 aa10.62□□□□□ -0.71
TNFAIP1-201ENST00000226225 ZC3HAV1LQ96H79 300 aaKnown RBP10.62□□□□□ -0.71
TNFAIP1-201ENST00000226225 ERMAPQ96PL5 475 aaPredicted RBP10.62□□□□□ -0.71
TNFAIP1-201ENST00000226225 GHITMQ9H3K2 345 aa10.62□□□□□ -0.71
TNFAIP1-201ENST00000226225 MGAT4CQ9UBM8 478 aa10.62□□□□□ -0.71
TNFAIP1-201ENST00000226225 EXOSC1Q9Y3B2 195 aaKnown RBP10.62□□□□□ -0.71
TNFAIP1-201ENST00000226225 AK6Q9Y3D8 172 aaKnown RBP10.62□□□□□ -0.71
TNFAIP1-201ENST00000226225 FXYD6-FXYD2A0A087WZ82 144 aa10.62□□□□□ -0.71
TNFAIP1-201ENST00000226225 H3BML4 177 aa10.62□□□□□ -0.71
TNFAIP1-201ENST00000226225 L7N2F9 121 aa10.62□□□□□ -0.71
TNFAIP1-201ENST00000226225 TFP02787 698 aa10.62□□□□□ -0.71
TNFAIP1-201ENST00000226225 NAGAP17050 411 aa10.62□□□□□ -0.71
TNFAIP1-201ENST00000226225 TACR3P29371 465 aa10.62□□□□□ -0.71
TNFAIP1-201ENST00000226225 DBX2Q6ZNG2 339 aa10.62□□□□□ -0.71
TNFAIP1-201ENST00000226225 OR11G2Q8NGC1 345 aa10.62□□□□□ -0.71
TNFAIP1-201ENST00000226225 OR4K17Q8NGC6 315 aa10.62□□□□□ -0.71
TNFAIP1-201ENST00000226225 OR13C2Q8NGS9 318 aa10.62□□□□□ -0.71
TNFAIP1-201ENST00000226225 FXYD6Q9H0Q3 95 aa10.62□□□□□ -0.71
TNFAIP1-201ENST00000226225 DLL4Q9NR61 685 aa10.62□□□□□ -0.71
TNFAIP1-201ENST00000226225 C20orf141Q9NUB4 165 aa10.62□□□□□ -0.71
TNFAIP1-201ENST00000226225 HPF1Q9NWY4 346 aa10.62□□□□□ -0.71
TNFAIP1-201ENST00000226225 P4HTMQ9NXG6 502 aa10.62□□□□□ -0.71
TNFAIP1-201ENST00000226225 RCE1Q9Y256 329 aa10.62□□□□□ -0.71
TNFAIP1-201ENST00000226225 SLC19A2O60779 497 aa10.61□□□□□ -0.71
TNFAIP1-201ENST00000226225 ADAM11O75078 769 aa10.61□□□□□ -0.71
TNFAIP1-201ENST00000226225 CLUP10909 449 aa10.61□□□□□ -0.71
TNFAIP1-201ENST00000226225 GSTM3P21266 225 aa10.61□□□□□ -0.71
TNFAIP1-201ENST00000226225 IL32P24001 234 aa10.61□□□□□ -0.71
TNFAIP1-201ENST00000226225 MAGEB1P43366 347 aa10.61□□□□□ -0.71
TNFAIP1-201ENST00000226225 CENPAP49450 140 aa10.61□□□□□ -0.71
TNFAIP1-201ENST00000226225 CHAF1BQ13112 559 aa10.61□□□□□ -0.71
TNFAIP1-201ENST00000226225 CAMK2DQ13557 499 aa10.61□□□□□ -0.71
TNFAIP1-201ENST00000226225 OPCMLQ14982 345 aa10.61□□□□□ -0.71
TNFAIP1-201ENST00000226225 B3GNTL1Q67FW5 361 aaPredicted RBP10.61□□□□□ -0.71
TNFAIP1-201ENST00000226225 MRPL14Q6P1L8 145 aaKnown RBP10.61□□□□□ -0.71
TNFAIP1-201ENST00000226225 SFXN4Q6P4A7 337 aa10.61□□□□□ -0.71
TNFAIP1-201ENST00000226225 NLRC3Q7RTR2 1065 aa10.61□□□□□ -0.71
TNFAIP1-201ENST00000226225 OR4Q3Q8NH05 313 aa10.61□□□□□ -0.71
TNFAIP1-201ENST00000226225 MARC2Q969Z3 335 aa10.61□□□□□ -0.71
TNFAIP1-201ENST00000226225 SORCS2Q96PQ0 1159 aa10.61□□□□□ -0.71
TNFAIP1-201ENST00000226225 PRRX2Q99811 253 aa10.61□□□□□ -0.71
TNFAIP1-201ENST00000226225 TMEM129A0AVI4 362 aa10.61□□□□□ -0.71
TNFAIP1-201ENST00000226225 STMND1H3BQB6 276 aa10.61□□□□□ -0.71
TNFAIP1-201ENST00000226225 ARPC1BO15143 372 aaKnown RBP10.61□□□□□ -0.71
TNFAIP1-201ENST00000226225 RNF13O43567 381 aa10.61□□□□□ -0.71
TNFAIP1-201ENST00000226225 RAD1O60671 282 aa10.61□□□□□ -0.71
TNFAIP1-201ENST00000226225 PPM1BO75688 479 aa10.61□□□□□ -0.71
TNFAIP1-201ENST00000226225 HOXD4P09016 255 aaPredicted RBP10.61□□□□□ -0.71
TNFAIP1-201ENST00000226225 PYCR1P32322 319 aa10.61□□□□□ -0.71
TNFAIP1-201ENST00000226225 GALNSP34059 522 aa10.61□□□□□ -0.71
TNFAIP1-201ENST00000226225 LINC00696Q6ZRV3 163 aa10.61□□□□□ -0.71
TNFAIP1-201ENST00000226225 LINC00471Q8N535 108 aa10.61□□□□□ -0.71
TNFAIP1-201ENST00000226225 APOBEC4Q8WW27 367 aaKnown RBP10.61□□□□□ -0.71
TNFAIP1-201ENST00000226225 GINS4Q9BRT9 223 aa10.61□□□□□ -0.71
TNFAIP1-201ENST00000226225 ZPBPQ9BS86 351 aa10.61□□□□□ -0.71
TNFAIP1-201ENST00000226225 MED18Q9BUE0 208 aa10.61□□□□□ -0.71
TNFAIP1-201ENST00000226225 ALG8Q9BVK2 526 aa10.61□□□□□ -0.71
TNFAIP1-201ENST00000226225 MAN2C1Q9NTJ4 1040 aa10.61□□□□□ -0.71
TNFAIP1-201ENST00000226225 IGLV3-12A0A075B6K2 115 aa10.6□□□□□ -0.71
TNFAIP1-201ENST00000226225 H0YC42 278 aa10.6□□□□□ -0.71
TNFAIP1-201ENST00000226225 TP53I11O14683 189 aa10.6□□□□□ -0.71
TNFAIP1-201ENST00000226225 SEC14L5O43304 696 aa10.6□□□□□ -0.71
TNFAIP1-201ENST00000226225 GMDSO60547 372 aa10.6□□□□□ -0.71
TNFAIP1-201ENST00000226225 KLF7O75840 302 aaPredicted RBP10.6□□□□□ -0.71
TNFAIP1-201ENST00000226225 RGS9O75916 674 aaPredicted RBP10.6□□□□□ -0.71
TNFAIP1-201ENST00000226225 OR6A2O95222 327 aa10.6□□□□□ -0.71
TNFAIP1-201ENST00000226225 RRASP10301 218 aa10.6□□□□□ -0.71
TNFAIP1-201ENST00000226225 PGCP20142 388 aa10.6□□□□□ -0.71
TNFAIP1-201ENST00000226225 GPR85P60893 370 aa10.6□□□□□ -0.71
TNFAIP1-201ENST00000226225 EIF3IQ13347 325 aaKnown RBP10.6□□□□□ -0.71
TNFAIP1-201ENST00000226225 TOMM34Q15785 309 aaPredicted RBP10.6□□□□□ -0.71
TNFAIP1-201ENST00000226225 ZNF385CQ66K41 422 aaPredicted RBP10.6□□□□□ -0.71
TNFAIP1-201ENST00000226225 NHLRC1Q6VVB1 395 aa10.6□□□□□ -0.71
TNFAIP1-201ENST00000226225 VASH2Q86V25 355 aa10.6□□□□□ -0.71
TNFAIP1-201ENST00000226225 OR5M1Q8NGP8 315 aa10.6□□□□□ -0.71
TNFAIP1-201ENST00000226225 OR2T4Q8NH00 348 aa10.6□□□□□ -0.71
TNFAIP1-201ENST00000226225 FANK1Q8TC84 345 aa10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms