RNA–Protein interactions for RNA: ENST00000217315.9

TM9SF4-201, Transcript of transmembrane 9 superfamily member 4, humanhuman

TSL 2 BASIC

Gene TM9SF4, Length 4,032 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4-201ENST00000217315 TMEM244Q5VVB8 128 aa11.25□□□□□ -0.61
TM9SF4-201ENST00000217315 METTL8Q9H825 291 aaKnown RBP11.25□□□□□ -0.61
TM9SF4-201ENST00000217315 TMEM74BQ9NUR3 256 aa11.25□□□□□ -0.61
TM9SF4-201ENST00000217315 CGGBP1Q9UFW8 167 aaPredicted RBP11.25□□□□□ -0.61
TM9SF4-201ENST00000217315 KCNE5Q9UJ90 142 aa11.25□□□□□ -0.61
TM9SF4-201ENST00000217315 PILRAQ9UKJ1 303 aa11.25□□□□□ -0.61
TM9SF4-201ENST00000217315 ZSCAN5BA6NJL1 495 aa11.25□□□□□ -0.61
TM9SF4-201ENST00000217315 NR2C1P13056 603 aa11.25□□□□□ -0.61
TM9SF4-201ENST00000217315 AKR1C4P17516 323 aa11.25□□□□□ -0.61
TM9SF4-201ENST00000217315 CDKN2AP42771 156 aaKnown RBP11.25□□□□□ -0.61
TM9SF4-201ENST00000217315 CAMK2DQ13557 499 aa11.25□□□□□ -0.61
TM9SF4-201ENST00000217315 KANSL1Q7Z3B3 1105 aa11.25□□□□□ -0.61
TM9SF4-201ENST00000217315 ABHD12BQ7Z5M8 362 aaPredicted RBP11.25□□□□□ -0.61
TM9SF4-201ENST00000217315 STT3BQ8TCJ2 826 aa11.25□□□□□ -0.61
TM9SF4-201ENST00000217315 TM4SF19Q96DZ7 209 aa11.25□□□□□ -0.61
TM9SF4-201ENST00000217315 NKX3-1Q99801 234 aaPredicted RBP11.25□□□□□ -0.61
TM9SF4-201ENST00000217315 CCDC86Q9H6F5 360 aaKnown RBP11.25□□□□□ -0.61
TM9SF4-201ENST00000217315 MMP25Q9NPA2 562 aa11.25□□□□□ -0.61
TM9SF4-201ENST00000217315 SDK2Q58EX2 2172 aa11.24□□□□□ -0.61
TM9SF4-201ENST00000217315 ANKRD34BA5PLL1 514 aa11.24□□□□□ -0.61
TM9SF4-201ENST00000217315 LMO7DNF2Z398 122 aa11.24□□□□□ -0.61
TM9SF4-201ENST00000217315 SEC14L5O43304 696 aa11.24□□□□□ -0.61
TM9SF4-201ENST00000217315 GPANK1O95872 356 aa11.24□□□□□ -0.61
TM9SF4-201ENST00000217315 CTSBP07858 339 aa11.24□□□□□ -0.61
TM9SF4-201ENST00000217315 EVI2BP34910 448 aa11.24□□□□□ -0.61
TM9SF4-201ENST00000217315 DLX5P56178 289 aa11.24□□□□□ -0.61
TM9SF4-201ENST00000217315 RPL27P61353 136 aaKnown RBP11.24□□□□□ -0.61
TM9SF4-201ENST00000217315 CXADRP78310 365 aa11.24□□□□□ -0.61
TM9SF4-201ENST00000217315 COL28A1Q2UY09 1125 aa11.24□□□□□ -0.61
TM9SF4-201ENST00000217315 GRINAQ7Z429 371 aa11.24□□□□□ -0.61
TM9SF4-201ENST00000217315 TMEM17Q86X19 198 aa11.24□□□□□ -0.61
TM9SF4-201ENST00000217315 OR4D9Q8NGE8 314 aa11.24□□□□□ -0.61
TM9SF4-201ENST00000217315 ZFAND1Q8TCF1 268 aa11.24□□□□□ -0.61
TM9SF4-201ENST00000217315 FAM3DQ96BQ1 224 aa11.24□□□□□ -0.61
TM9SF4-201ENST00000217315 LRFN5Q96NI6 719 aa11.24□□□□□ -0.61
TM9SF4-201ENST00000217315 NUDT9Q9BW91 350 aa11.24□□□□□ -0.61
TM9SF4-201ENST00000217315 F5H5K5 113 aa11.24□□□□□ -0.61
TM9SF4-201ENST00000217315 GABARAPH6UMI1 98 aa11.24□□□□□ -0.61
TM9SF4-201ENST00000217315 SULT2B1O00204 365 aa11.24□□□□□ -0.61
TM9SF4-201ENST00000217315 ARPC3O15145 178 aa11.24□□□□□ -0.61
TM9SF4-201ENST00000217315 ZIC2O95409 532 aaPredicted RBP11.24□□□□□ -0.61
TM9SF4-201ENST00000217315 TP53P04637 393 aaPredicted RBP11.24□□□□□ -0.61
TM9SF4-201ENST00000217315 ANXA7P20073 488 aaKnown RBP11.24□□□□□ -0.61
TM9SF4-201ENST00000217315 UBE2IP63279 158 aaKnown RBP11.24□□□□□ -0.61
TM9SF4-201ENST00000217315 PUDPQ08623 228 aa11.24□□□□□ -0.61
TM9SF4-201ENST00000217315 C17orf67Q0P5P2 114 aa11.24□□□□□ -0.61
TM9SF4-201ENST00000217315 CD226Q15762 336 aa11.24□□□□□ -0.61
TM9SF4-201ENST00000217315 STAC2Q6ZMT1 411 aa11.24□□□□□ -0.61
TM9SF4-201ENST00000217315 BTN2A1Q7KYR7 527 aa11.24□□□□□ -0.61
TM9SF4-201ENST00000217315 OR2G2Q8NGZ5 317 aa11.24□□□□□ -0.61
TM9SF4-201ENST00000217315 VOPP1Q96AW1 172 aa11.24□□□□□ -0.61
TM9SF4-201ENST00000217315 RBM24Q9BX46 236 aaKnown RBP11.24□□□□□ -0.61
TM9SF4-201ENST00000217315 GSKIPQ9P0R6 139 aa11.24□□□□□ -0.61
TM9SF4-201ENST00000217315 DOCK9Q9BZ29 2069 aa11.24□□□□□ -0.61
TM9SF4-201ENST00000217315 METTL12A8MUP2 240 aa11.24□□□□□ -0.61
TM9SF4-201ENST00000217315 SC5DO75845 299 aa11.24□□□□□ -0.61
TM9SF4-201ENST00000217315 ZFAND5O76080 213 aa11.24□□□□□ -0.61
TM9SF4-201ENST00000217315 SRFP11831 508 aa11.24□□□□□ -0.61
TM9SF4-201ENST00000217315 BIDP55957 195 aa11.24□□□□□ -0.61
TM9SF4-201ENST00000217315 SMCO1Q147U7 214 aa11.24□□□□□ -0.61
TM9SF4-201ENST00000217315 CORO6Q6QEF8 472 aa11.24□□□□□ -0.61
TM9SF4-201ENST00000217315 FAM198BQ6UWH4 519 aa11.24□□□□□ -0.61
TM9SF4-201ENST00000217315 PPP1R3BQ86XI6 285 aa11.24□□□□□ -0.61
TM9SF4-201ENST00000217315 OR6V1Q8N148 313 aa11.24□□□□□ -0.61
TM9SF4-201ENST00000217315 OR13C9Q8NGT0 318 aa11.24□□□□□ -0.61
TM9SF4-201ENST00000217315 PHF7Q9BWX1 381 aaPredicted RBP11.24□□□□□ -0.61
TM9SF4-201ENST00000217315 FKRPQ9H9S5 495 aa11.24□□□□□ -0.61
TM9SF4-201ENST00000217315 EEF1E1-BLOC1S5C9J1V9 151 aa11.23□□□□□ -0.61
TM9SF4-201ENST00000217315 MEN1O00255 615 aa11.23□□□□□ -0.61
TM9SF4-201ENST00000217315 EIF4E2O60573 245 aaKnown RBP11.23□□□□□ -0.61
TM9SF4-201ENST00000217315 IFNGR1P15260 489 aa11.23□□□□□ -0.61
TM9SF4-201ENST00000217315 NME1P15531 152 aaKnown RBP11.23□□□□□ -0.61
TM9SF4-201ENST00000217315 GALP22466 123 aa11.23□□□□□ -0.61
TM9SF4-201ENST00000217315 NKAIN1Q4KMZ8 207 aa11.23□□□□□ -0.61
TM9SF4-201ENST00000217315 SYT13Q7L8C5 426 aa11.23□□□□□ -0.61
TM9SF4-201ENST00000217315 DCXRQ7Z4W1 244 aa11.23□□□□□ -0.61
TM9SF4-201ENST00000217315 RNASE11Q8TAA1 199 aaKnown RBP11.23□□□□□ -0.61
TM9SF4-201ENST00000217315 LAT2Q9GZY6 243 aa11.23□□□□□ -0.61
TM9SF4-201ENST00000217315 TRAV1-2A0A0B4J238 106 aa11.23□□□□□ -0.61
TM9SF4-201ENST00000217315 P2RY10O00398 339 aa11.23□□□□□ -0.61
TM9SF4-201ENST00000217315 IL33O95760 270 aa11.23□□□□□ -0.61
TM9SF4-201ENST00000217315 ERCC1P07992 297 aaPredicted RBP11.23□□□□□ -0.61
TM9SF4-201ENST00000217315 ATF4P18848 351 aaPredicted RBP11.23□□□□□ -0.61
TM9SF4-201ENST00000217315 HTR2CP28335 458 aa11.23□□□□□ -0.61
TM9SF4-201ENST00000217315 P2RX1P51575 399 aa11.23□□□□□ -0.61
TM9SF4-201ENST00000217315 LPAL2Q16609 132 aa11.23□□□□□ -0.61
TM9SF4-201ENST00000217315 TMEM176BQ3YBM2 270 aaPredicted RBP11.23□□□□□ -0.61
TM9SF4-201ENST00000217315 NKAPLQ5M9Q1 402 aa11.23□□□□□ -0.61
TM9SF4-201ENST00000217315 CD276Q5ZPR3 534 aa11.23□□□□□ -0.61
TM9SF4-201ENST00000217315 SLC22A18ASQ8N1D0 253 aa11.23□□□□□ -0.61
TM9SF4-201ENST00000217315 ZNF775Q96BV0 537 aaPredicted RBP11.23□□□□□ -0.61
TM9SF4-201ENST00000217315 DCBLD2Q96PD2 775 aa11.23□□□□□ -0.61
TM9SF4-201ENST00000217315 DDOQ99489 341 aa11.23□□□□□ -0.61
TM9SF4-201ENST00000217315 MNTQ99583 582 aa11.23□□□□□ -0.61
TM9SF4-201ENST00000217315 SEMA4CQ9C0C4 833 aa11.23□□□□□ -0.61
TM9SF4-201ENST00000217315 ZNF701Q9NV72 531 aaPredicted RBP11.23□□□□□ -0.61
TM9SF4-201ENST00000217315 STEAP1Q9UHE8 339 aa11.23□□□□□ -0.61
TM9SF4-201ENST00000217315 LILRA5A6NI73 299 aa11.23□□□□□ -0.61
TM9SF4-201ENST00000217315 F5H5P2 479 aa11.23□□□□□ -0.61
TM9SF4-201ENST00000217315 AKR7A3O95154 331 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms