RNA–Protein interactions for RNA: ENSMUST00000003857.6

Shkbp1-201, Transcript of SH3KBP1-binding protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Shkbp1, Length 2,358 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Shkbp1-201ENSMUST00000003857 Rps4xP62702 263 aaKnown RBP17.13■□□□□ 0.33
Shkbp1-201ENSMUST00000003857 D17Wsu92eQ3TT38 291 aa17.13■□□□□ 0.33
Shkbp1-201ENSMUST00000003857 Alg11Q3TZM9 492 aa17.13■□□□□ 0.33
Shkbp1-201ENSMUST00000003857 Eml2Q7TNG5 649 aa17.13■□□□□ 0.33
Shkbp1-201ENSMUST00000003857 2810021J22RikQ8BIB6 539 aa17.13■□□□□ 0.33
Shkbp1-201ENSMUST00000003857 RybpQ8CCI5 228 aa17.13■□□□□ 0.33
Shkbp1-201ENSMUST00000003857 Olfr165Q8VFA2 313 aa17.13■□□□□ 0.33
Shkbp1-201ENSMUST00000003857 Olfr970Q8VFN3 311 aa17.13■□□□□ 0.33
Shkbp1-201ENSMUST00000003857 Asb15Q8VHS6 583 aa17.13■□□□□ 0.33
Shkbp1-201ENSMUST00000003857 Emc3Q99KI3 261 aa17.13■□□□□ 0.33
Shkbp1-201ENSMUST00000003857 Lap3Q9CPY7 519 aa17.13■□□□□ 0.33
Shkbp1-201ENSMUST00000003857 CrtapQ9CYD3 400 aa17.13■□□□□ 0.33
Shkbp1-201ENSMUST00000003857 Mpc2Q9D023 127 aa17.13■□□□□ 0.33
Shkbp1-201ENSMUST00000003857 Eci2Q9WUR2 391 aa17.13■□□□□ 0.33
Shkbp1-201ENSMUST00000003857 Gm9573F7C950 1606 aa17.13■□□□□ 0.33
Shkbp1-201ENSMUST00000003857 Skint10A7TZG1 354 aa17.13■□□□□ 0.33
Shkbp1-201ENSMUST00000003857 Gm21876F6XK35 94 aa17.13■□□□□ 0.33
Shkbp1-201ENSMUST00000003857 Cd48P18181 240 aa17.13■□□□□ 0.33
Shkbp1-201ENSMUST00000003857 Rpl18P35980 188 aaKnown RBP17.13■□□□□ 0.33
Shkbp1-201ENSMUST00000003857 Rit1P70426 219 aa17.13■□□□□ 0.33
Shkbp1-201ENSMUST00000003857 Tmprss11bQ14C59 416 aa17.13■□□□□ 0.33
Shkbp1-201ENSMUST00000003857 NnatQ61979 81 aa17.13■□□□□ 0.33
Shkbp1-201ENSMUST00000003857 Fgd2Q8BY35 655 aa17.13■□□□□ 0.33
Shkbp1-201ENSMUST00000003857 Olfr531Q8VGL2 304 aa17.13■□□□□ 0.33
Shkbp1-201ENSMUST00000003857 Chrm5Q920H4 532 aa17.13■□□□□ 0.33
Shkbp1-201ENSMUST00000003857 Gpn3Q9D3W4 284 aa17.13■□□□□ 0.33
Shkbp1-201ENSMUST00000003857 Lime1Q9EQR5 269 aa17.13■□□□□ 0.33
Shkbp1-201ENSMUST00000003857 Dkk3Q9QUN9 349 aa17.13■□□□□ 0.33
Shkbp1-201ENSMUST00000003857 Cdh23Q99PF4 3354 aa17.12■□□□□ 0.33
Shkbp1-201ENSMUST00000003857 MpdzQ8VBX6 2055 aa17.12■□□□□ 0.33
Shkbp1-201ENSMUST00000003857 Gm9008E9PVG0 424 aa17.12■□□□□ 0.33
Shkbp1-201ENSMUST00000003857 Gm8220F6YKI2 213 aa17.12■□□□□ 0.33
Shkbp1-201ENSMUST00000003857 Gm8906L7N2A2 181 aa17.12■□□□□ 0.33
Shkbp1-201ENSMUST00000003857 Tmem178bM0QWJ9 172 aa17.12■□□□□ 0.33
Shkbp1-201ENSMUST00000003857 Zfp13P10754 512 aa17.12■□□□□ 0.33
Shkbp1-201ENSMUST00000003857 Tacr1P30548 407 aa17.12■□□□□ 0.33
Shkbp1-201ENSMUST00000003857 EpxP49290 716 aa17.12■□□□□ 0.33
Shkbp1-201ENSMUST00000003857 4930438A08RikQ5SPH3 536 aa17.12■□□□□ 0.33
Shkbp1-201ENSMUST00000003857 Vmn1r196Q5SVD5 301 aa17.12■□□□□ 0.33
Shkbp1-201ENSMUST00000003857 Gpatch2Q7TQC7 527 aa17.12■□□□□ 0.33
Shkbp1-201ENSMUST00000003857 Fam210aQ8BGY7 273 aa17.12■□□□□ 0.33
Shkbp1-201ENSMUST00000003857 Rnf26Q8BUH7 424 aa17.12■□□□□ 0.33
Shkbp1-201ENSMUST00000003857 Eps8l3Q91WL0 600 aa17.12■□□□□ 0.33
Shkbp1-201ENSMUST00000003857 Uxs1Q91XL3 420 aa17.12■□□□□ 0.33
Shkbp1-201ENSMUST00000003857 Dusp22Q99N11 184 aa17.12■□□□□ 0.33
Shkbp1-201ENSMUST00000003857 FtmtQ9D5H4 237 aa17.12■□□□□ 0.33
Shkbp1-201ENSMUST00000003857 Q9D8N1 392 aa17.12■□□□□ 0.33
Shkbp1-201ENSMUST00000003857 Scnn1gQ9WU39 655 aa17.12■□□□□ 0.33
Shkbp1-201ENSMUST00000003857 HelzQ6DFV5 1964 aaKnown RBP17.12■□□□□ 0.33
Shkbp1-201ENSMUST00000003857 Gm572B1ARY8 399 aa17.11■□□□□ 0.33
Shkbp1-201ENSMUST00000003857 Nr1h5E9Q5A6 505 aa17.11■□□□□ 0.33
Shkbp1-201ENSMUST00000003857 Oosp3G5E8D7 195 aa17.11■□□□□ 0.33
Shkbp1-201ENSMUST00000003857 Olfr889L7N1Y6 314 aa17.11■□□□□ 0.33
Shkbp1-201ENSMUST00000003857 Agtr1bP29755 359 aa17.11■□□□□ 0.33
Shkbp1-201ENSMUST00000003857 Sstr2P30875 369 aa17.11■□□□□ 0.33
Shkbp1-201ENSMUST00000003857 Slc38a8Q5HZH7 432 aa17.11■□□□□ 0.33
Shkbp1-201ENSMUST00000003857 Zp3rQ60736 579 aa17.11■□□□□ 0.33
Shkbp1-201ENSMUST00000003857 Il10rbQ61190 349 aa17.11■□□□□ 0.33
Shkbp1-201ENSMUST00000003857 Lpar4Q8BLG2 370 aa17.11■□□□□ 0.33
Shkbp1-201ENSMUST00000003857 Amdhd2Q8JZV7 409 aa17.11■□□□□ 0.33
Shkbp1-201ENSMUST00000003857 Olfr518Q8VEW1 333 aa17.11■□□□□ 0.33
Shkbp1-201ENSMUST00000003857 Olfr870Q8VGG4 311 aa17.11■□□□□ 0.33
Shkbp1-201ENSMUST00000003857 Chmp1b1Q99LU0 199 aa17.11■□□□□ 0.33
Shkbp1-201ENSMUST00000003857 Tex44Q9DA60 530 aa17.11■□□□□ 0.33
Shkbp1-201ENSMUST00000003857 Mfsd1Q9DC37 464 aa17.11■□□□□ 0.33
Shkbp1-201ENSMUST00000003857 SmpxQ9DC77 85 aa17.11■□□□□ 0.33
Shkbp1-201ENSMUST00000003857 Lat2Q9JHL0 203 aa17.11■□□□□ 0.33
Shkbp1-201ENSMUST00000003857 Igkv9-123A0A140T8N8 117 aa17.11■□□□□ 0.33
Shkbp1-201ENSMUST00000003857 Olfr663A0A1B0GSI9 319 aa17.11■□□□□ 0.33
Shkbp1-201ENSMUST00000003857 Omt2aF6ZJR3 104 aa17.11■□□□□ 0.33
Shkbp1-201ENSMUST00000003857 Lin7bO88951 207 aa17.11■□□□□ 0.33
Shkbp1-201ENSMUST00000003857 P01851 173 aa17.11■□□□□ 0.33
Shkbp1-201ENSMUST00000003857 P01852 173 aa17.11■□□□□ 0.33
Shkbp1-201ENSMUST00000003857 Ifi204P0DOV2 619 aa17.11■□□□□ 0.33
Shkbp1-201ENSMUST00000003857 Spi1P17433 272 aa17.11■□□□□ 0.33
Shkbp1-201ENSMUST00000003857 Cox5bP19536 128 aa17.11■□□□□ 0.33
Shkbp1-201ENSMUST00000003857 Ap2s1P62743 142 aa17.11■□□□□ 0.33
Shkbp1-201ENSMUST00000003857 Znf775Q8BI73 538 aa17.11■□□□□ 0.33
Shkbp1-201ENSMUST00000003857 C1sbQ8CFG8 688 aa17.11■□□□□ 0.33
Shkbp1-201ENSMUST00000003857 Q8R2K8 148 aa17.11■□□□□ 0.33
Shkbp1-201ENSMUST00000003857 Olfr1163Q8VFR4 316 aa17.11■□□□□ 0.33
Shkbp1-201ENSMUST00000003857 Rnf138Q9CQE0 245 aaKnown RBP17.11■□□□□ 0.33
Shkbp1-201ENSMUST00000003857 Rpl22l1Q9D7S7 122 aaKnown RBP17.11■□□□□ 0.33
Shkbp1-201ENSMUST00000003857 Olfr27Q9EQ90 311 aa17.11■□□□□ 0.33
Shkbp1-201ENSMUST00000003857 Ighv1-24A0A0A6YY24 117 aa17.1■□□□□ 0.33
Shkbp1-201ENSMUST00000003857 Olfr1493-ps1A0A140LHU2 316 aa17.1■□□□□ 0.33
Shkbp1-201ENSMUST00000003857 Slc25a43A2A3V2 341 aa17.1■□□□□ 0.33
Shkbp1-201ENSMUST00000003857 Aadacl3A2A7Z8 408 aa17.1■□□□□ 0.33
Shkbp1-201ENSMUST00000003857 Olfr1224-ps1A3KGY4 311 aa17.1■□□□□ 0.33
Shkbp1-201ENSMUST00000003857 Gm9493F6SVV1 192 aaKnown RBP17.1■□□□□ 0.33
Shkbp1-201ENSMUST00000003857 Tmem200cJ3QK46 637 aa17.1■□□□□ 0.33
Shkbp1-201ENSMUST00000003857 Gm3542K7N6U2 270 aa17.1■□□□□ 0.33
Shkbp1-201ENSMUST00000003857 Slc16a7O70451 484 aa17.1■□□□□ 0.33
Shkbp1-201ENSMUST00000003857 MagP20917 626 aa17.1■□□□□ 0.33
Shkbp1-201ENSMUST00000003857 Cass4Q08EC4 804 aa17.1■□□□□ 0.33
Shkbp1-201ENSMUST00000003857 Tmem217Q14AF1 189 aa17.1■□□□□ 0.33
Shkbp1-201ENSMUST00000003857 Lin28bQ45KJ6 247 aaKnown RBP17.1■□□□□ 0.33
Shkbp1-201ENSMUST00000003857 Sema4cQ64151 834 aa17.1■□□□□ 0.33
Shkbp1-201ENSMUST00000003857 Olfr1321Q7TQW4 319 aa17.1■□□□□ 0.33
Shkbp1-201ENSMUST00000003857 Lrrc75aQ7TSF4 339 aa17.1■□□□□ 0.33
Retrieved 100 of 22,080 RNA–protein pairs in 40.8 ms