RNA–Protein interactions for RNA: ENST00000642041.1

PHGDH-234, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 943 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-234ENST00000642041 DIO1P49895 249 aa15.44■□□□□ 0.06
PHGDH-234ENST00000642041 GALEQ14376 348 aa15.44■□□□□ 0.06
PHGDH-234ENST00000642041 ZNF239Q16600 458 aaKnown RBP15.44■□□□□ 0.06
PHGDH-234ENST00000642041 CTF1Q16619 201 aa15.44■□□□□ 0.06
PHGDH-234ENST00000642041 PLPPR5Q32ZL2 321 aa15.44■□□□□ 0.06
PHGDH-234ENST00000642041 KLHL12Q53G59 568 aa15.44■□□□□ 0.06
PHGDH-234ENST00000642041 ACER2Q5QJU3 275 aa15.44■□□□□ 0.06
PHGDH-234ENST00000642041 ZNF362Q5T0B9 420 aaPredicted RBP15.44■□□□□ 0.06
PHGDH-234ENST00000642041 ABHD17BQ5VST6 288 aa15.44■□□□□ 0.06
PHGDH-234ENST00000642041 SYS1Q8N2H4 156 aa15.44■□□□□ 0.06
PHGDH-234ENST00000642041 GTPBP8Q8N3Z3 284 aaPredicted RBP15.44■□□□□ 0.06
PHGDH-234ENST00000642041 LRRC75AQ8NAA5 344 aa15.44■□□□□ 0.06
PHGDH-234ENST00000642041 MOSPD2Q8NHP6 518 aa15.44■□□□□ 0.06
PHGDH-234ENST00000642041 SGCDQ92629 289 aa15.44■□□□□ 0.06
PHGDH-234ENST00000642041 OTULINQ96BN8 352 aa15.44■□□□□ 0.06
PHGDH-234ENST00000642041 ZHX1-C8orf76Q96EF9 292 aa15.44■□□□□ 0.06
PHGDH-234ENST00000642041 KTI12Q96EK9 354 aaPredicted RBP15.44■□□□□ 0.06
PHGDH-234ENST00000642041 PIGQQ9BRB3 760 aa15.44■□□□□ 0.06
PHGDH-234ENST00000642041 KATNB1Q9BVA0 655 aa15.44■□□□□ 0.06
PHGDH-234ENST00000642041 TXNIPQ9H3M7 391 aa15.44■□□□□ 0.06
PHGDH-234ENST00000642041 TRIM36Q9NQ86 728 aa15.44■□□□□ 0.06
PHGDH-234ENST00000642041 MED11Q9P086 117 aa15.44■□□□□ 0.06
PHGDH-234ENST00000642041 SSR3Q9UNL2 185 aa15.44■□□□□ 0.06
PHGDH-234ENST00000642041 LSM2Q9Y333 95 aaKnown RBP15.44■□□□□ 0.06
PHGDH-234ENST00000642041 DAPL1A0PJW8 107 aa15.43■□□□□ 0.06
PHGDH-234ENST00000642041 MCIDASD6RGH6 385 aa15.43■□□□□ 0.06
PHGDH-234ENST00000642041 ADAM10O14672 748 aa15.43■□□□□ 0.06
PHGDH-234ENST00000642041 GNB5O14775 395 aa15.43■□□□□ 0.06
PHGDH-234ENST00000642041 MT-ND5P03915 603 aa15.43■□□□□ 0.06
PHGDH-234ENST00000642041 CD1AP06126 327 aa15.43■□□□□ 0.06
PHGDH-234ENST00000642041 TACSTD2P09758 323 aa15.43■□□□□ 0.06
PHGDH-234ENST00000642041 SOX6P35712 828 aa15.43■□□□□ 0.06
PHGDH-234ENST00000642041 ART1P52961 327 aa15.43■□□□□ 0.06
PHGDH-234ENST00000642041 RPL27P61353 136 aaKnown RBP15.43■□□□□ 0.06
PHGDH-234ENST00000642041 SLC35A1P78382 337 aa15.43■□□□□ 0.06
PHGDH-234ENST00000642041 ROR2Q01974 943 aaKnown RBP15.43■□□□□ 0.06
PHGDH-234ENST00000642041 RPL18Q07020 188 aaKnown RBP15.43■□□□□ 0.06
PHGDH-234ENST00000642041 CRMP1Q14194 572 aa15.43■□□□□ 0.06
PHGDH-234ENST00000642041 SLC35F1Q5T1Q4 408 aa15.43■□□□□ 0.06
PHGDH-234ENST00000642041 B3GNTL1Q67FW5 361 aaPredicted RBP15.43■□□□□ 0.06
PHGDH-234ENST00000642041 TIGD3Q6B0B8 471 aa15.43■□□□□ 0.06
PHGDH-234ENST00000642041 MTFR2Q6P444 385 aa15.43■□□□□ 0.06
PHGDH-234ENST00000642041 XKRXQ6PP77 449 aa15.43■□□□□ 0.06
PHGDH-234ENST00000642041 FAM122BQ7Z309 247 aa15.43■□□□□ 0.06
PHGDH-234ENST00000642041 PXKQ7Z7A4 578 aa15.43■□□□□ 0.06
PHGDH-234ENST00000642041 ARIH2OSQ8N7S6 290 aa15.43■□□□□ 0.06
PHGDH-234ENST00000642041 S100ZQ8WXG8 99 aa15.43■□□□□ 0.06
PHGDH-234ENST00000642041 NMNAT2Q9BZQ4 307 aa15.43■□□□□ 0.06
PHGDH-234ENST00000642041 RTN4RQ9BZR6 473 aa15.43■□□□□ 0.06
PHGDH-234ENST00000642041 ERVK13-1Q9NX77 482 aa15.43■□□□□ 0.06
PHGDH-234ENST00000642041 STMN3Q9NZ72 180 aa15.43■□□□□ 0.06
PHGDH-234ENST00000642041 STUB1Q9UNE7 303 aa15.43■□□□□ 0.06
PHGDH-234ENST00000642041 RPH3AQ9Y2J0 694 aaPredicted RBP15.43■□□□□ 0.06
PHGDH-234ENST00000642041 FKBP7Q9Y680 259 aa15.43■□□□□ 0.06
PHGDH-234ENST00000642041 CACNA1CQ13936 2221 aa15.42■□□□□ 0.06
PHGDH-234ENST00000642041 J3QRE1 110 aa15.42■□□□□ 0.06
PHGDH-234ENST00000642041 M0R082 166 aa15.42■□□□□ 0.06
PHGDH-234ENST00000642041 M0R129 80 aa15.42■□□□□ 0.06
PHGDH-234ENST00000642041 RNF13O43567 381 aa15.42■□□□□ 0.06
PHGDH-234ENST00000642041 ZNF354AO60765 605 aaPredicted RBP15.42■□□□□ 0.06
PHGDH-234ENST00000642041 HLA-DPB1P04440 258 aa15.42■□□□□ 0.06
PHGDH-234ENST00000642041 CELA2AP08217 269 aa15.42■□□□□ 0.06
PHGDH-234ENST00000642041 HSMCR30P0CW71 290 aa15.42■□□□□ 0.06
PHGDH-234ENST00000642041 HIST1H1CP16403 213 aaKnown RBP15.42■□□□□ 0.06
PHGDH-234ENST00000642041 CNR1P21554 472 aa15.42■□□□□ 0.06
PHGDH-234ENST00000642041 SRD5A2P31213 254 aa15.42■□□□□ 0.06
PHGDH-234ENST00000642041 AQP2P41181 271 aa15.42■□□□□ 0.06
PHGDH-234ENST00000642041 SLC16A1P53985 500 aa15.42■□□□□ 0.06
PHGDH-234ENST00000642041 CSNK2A1P68400 391 aaPredicted RBP15.42■□□□□ 0.06
PHGDH-234ENST00000642041 TLE4Q04727 773 aa15.42■□□□□ 0.06
PHGDH-234ENST00000642041 PUDPQ08623 228 aa15.42■□□□□ 0.06
PHGDH-234ENST00000642041 TOMM34Q15785 309 aaPredicted RBP15.42■□□□□ 0.06
PHGDH-234ENST00000642041 MEX3DQ86XN8 651 aaKnown RBP15.42■□□□□ 0.06
PHGDH-234ENST00000642041 CROCCP3Q8IVE0 287 aa15.42■□□□□ 0.06
PHGDH-234ENST00000642041 NPEPL1Q8NDH3 523 aa15.42■□□□□ 0.06
PHGDH-234ENST00000642041 THOC3Q96J01 351 aaKnown RBP15.42■□□□□ 0.06
PHGDH-234ENST00000642041 CNN2Q99439 309 aaKnown RBP15.42■□□□□ 0.06
PHGDH-234ENST00000642041 DDOQ99489 341 aa15.42■□□□□ 0.06
PHGDH-234ENST00000642041 OR51V1Q9H2C8 321 aa15.42■□□□□ 0.06
PHGDH-234ENST00000642041 ASB6Q9NWX5 421 aa15.42■□□□□ 0.06
PHGDH-234ENST00000642041 NDUFB11Q9NX14 153 aa15.42■□□□□ 0.06
PHGDH-234ENST00000642041 BABAM2Q9NXR7 383 aa15.42■□□□□ 0.06
PHGDH-234ENST00000642041 B4GALT7Q9UBV7 327 aa15.42■□□□□ 0.06
PHGDH-234ENST00000642041 BOKQ9UMX3 212 aaPredicted RBP15.42■□□□□ 0.06
PHGDH-234ENST00000642041 PRRC2AP48634 2157 aaKnown RBP15.41■□□□□ 0.06
PHGDH-234ENST00000642041 A0A1W2PNV4 684 aa15.41■□□□□ 0.06
PHGDH-234ENST00000642041 FTCDNL1E5RQL4 147 aa15.41■□□□□ 0.06
PHGDH-234ENST00000642041 PLPP3O14495 311 aa15.41■□□□□ 0.06
PHGDH-234ENST00000642041 PMS2P2O95744 297 aa15.41■□□□□ 0.06
PHGDH-234ENST00000642041 SERPINA3P01011 423 aa15.41■□□□□ 0.06
PHGDH-234ENST00000642041 TFPIP10646 304 aa15.41■□□□□ 0.06
PHGDH-234ENST00000642041 LIPAP38571 399 aa15.41■□□□□ 0.06
PHGDH-234ENST00000642041 ERVK-25P63136 954 aa15.41■□□□□ 0.06
PHGDH-234ENST00000642041 LTBQ06643 244 aa15.41■□□□□ 0.06
PHGDH-234ENST00000642041 KRR1Q13601 381 aaKnown RBP15.41■□□□□ 0.06
PHGDH-234ENST00000642041 ZNF169Q14929 603 aaPredicted RBP15.41■□□□□ 0.06
PHGDH-234ENST00000642041 CCDC58Q4VC31 144 aa15.41■□□□□ 0.06
PHGDH-234ENST00000642041 PDSS1Q5T2R2 415 aa15.41■□□□□ 0.06
PHGDH-234ENST00000642041 FAM180AQ6UWF9 173 aa15.41■□□□□ 0.06
PHGDH-234ENST00000642041 PLEKHG7Q6ZR37 379 aa15.41■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms