RNA–Protein interactions for RNA: ENST00000641927.1

PHGDH-230, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 1,678 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-230ENST00000641927 HSPE1-MOB4S4R3N1 261 aa15.51■□□□□ 0.07
PHGDH-230ENST00000641927 PRSS37A4D1T9 235 aa15.51■□□□□ 0.07
PHGDH-230ENST00000641927 OR6C68A6NDL8 312 aa15.51■□□□□ 0.07
PHGDH-230ENST00000641927 PRB1P04280 392 aa15.51■□□□□ 0.07
PHGDH-230ENST00000641927 SIRPAP78324 504 aa15.51■□□□□ 0.07
PHGDH-230ENST00000641927 DBPQ10586 325 aaPredicted RBP15.51■□□□□ 0.07
PHGDH-230ENST00000641927 MAD2L1BPQ15013 274 aaPredicted RBP15.51■□□□□ 0.07
PHGDH-230ENST00000641927 CNEP1R1Q8N9A8 125 aa15.51■□□□□ 0.07
PHGDH-230ENST00000641927 NPEPL1Q8NDH3 523 aa15.51■□□□□ 0.07
PHGDH-230ENST00000641927 OR9Q1Q8NGQ5 310 aa15.51■□□□□ 0.07
PHGDH-230ENST00000641927 OR6N1Q8NGY5 312 aa15.51■□□□□ 0.07
PHGDH-230ENST00000641927 SYT4Q9H2B2 425 aa15.51■□□□□ 0.07
PHGDH-230ENST00000641927 C12orf49Q9H741 205 aa15.51■□□□□ 0.07
PHGDH-230ENST00000641927 GP6Q9HCN6 339 aa15.51■□□□□ 0.07
PHGDH-230ENST00000641927 HINT3Q9NQE9 182 aaKnown RBP15.51■□□□□ 0.07
PHGDH-230ENST00000641927 DNAJC27Q9NZQ0 273 aa15.51■□□□□ 0.07
PHGDH-230ENST00000641927 OSGIN2Q9Y236 505 aa15.51■□□□□ 0.07
PHGDH-230ENST00000641927 RCE1Q9Y256 329 aa15.51■□□□□ 0.07
PHGDH-230ENST00000641927 MBD3L4A6NDZ8 208 aaPredicted RBP15.5■□□□□ 0.07
PHGDH-230ENST00000641927 MBD3L3A6NE82 208 aaPredicted RBP15.5■□□□□ 0.07
PHGDH-230ENST00000641927 MBD3L5A6NJ08 208 aaPredicted RBP15.5■□□□□ 0.07
PHGDH-230ENST00000641927 SS18L1O75177 396 aaPredicted RBP15.5■□□□□ 0.07
PHGDH-230ENST00000641927 IL2RAP01589 272 aa15.5■□□□□ 0.07
PHGDH-230ENST00000641927 AGTR1P30556 359 aa15.5■□□□□ 0.07
PHGDH-230ENST00000641927 NTF4P34130 210 aa15.5■□□□□ 0.07
PHGDH-230ENST00000641927 SNRPGP62308 76 aaKnown RBP15.5■□□□□ 0.07
PHGDH-230ENST00000641927 EFNB1P98172 346 aa15.5■□□□□ 0.07
PHGDH-230ENST00000641927 MRPL49Q13405 166 aaKnown RBP15.5■□□□□ 0.07
PHGDH-230ENST00000641927 SEM1Q6ZVN7 128 aa15.5■□□□□ 0.07
PHGDH-230ENST00000641927 NOXO1Q8NFA2 376 aa15.5■□□□□ 0.07
PHGDH-230ENST00000641927 RHOXF1Q8NHV9 184 aa15.5■□□□□ 0.07
PHGDH-230ENST00000641927 MBD3L2Q8NHZ7 208 aaPredicted RBP15.5■□□□□ 0.07
PHGDH-230ENST00000641927 TMEM45BQ96B21 275 aa15.5■□□□□ 0.07
PHGDH-230ENST00000641927 KCNK17Q96T54 332 aa15.5■□□□□ 0.07
PHGDH-230ENST00000641927 TTYH2Q9BSA4 534 aa15.5■□□□□ 0.07
PHGDH-230ENST00000641927 PARPBPQ9NWS1 579 aa15.5■□□□□ 0.07
PHGDH-230ENST00000641927 CLN6Q9NWW5 311 aa15.5■□□□□ 0.07
PHGDH-230ENST00000641927 H2AFY2Q9P0M6 372 aaPredicted RBP15.5■□□□□ 0.07
PHGDH-230ENST00000641927 EMC9Q9Y3B6 208 aa15.5■□□□□ 0.07
PHGDH-230ENST00000641927 SHANK1Q9Y566 2161 aa15.49■□□□□ 0.07
PHGDH-230ENST00000641927 SLC22A23A1A5C7 686 aa15.49■□□□□ 0.07
PHGDH-230ENST00000641927 SLC43A1O75387 559 aa15.49■□□□□ 0.07
PHGDH-230ENST00000641927 GYPBP06028 91 aa15.49■□□□□ 0.07
PHGDH-230ENST00000641927 PGA4P0DJD7 388 aa15.49■□□□□ 0.07
PHGDH-230ENST00000641927 PGA3P0DJD8 388 aa15.49■□□□□ 0.07
PHGDH-230ENST00000641927 CSNK1A1P48729 337 aa15.49■□□□□ 0.07
PHGDH-230ENST00000641927 TLE1Q04724 770 aa15.49■□□□□ 0.07
PHGDH-230ENST00000641927 KLHL12Q53G59 568 aa15.49■□□□□ 0.07
PHGDH-230ENST00000641927 FAM214BQ7L5A3 538 aa15.49■□□□□ 0.07
PHGDH-230ENST00000641927 NUFIP2Q7Z417 695 aaKnown RBP15.49■□□□□ 0.07
PHGDH-230ENST00000641927 ZNF100Q8IYN0 542 aa15.49■□□□□ 0.07
PHGDH-230ENST00000641927 TSSK2Q96PF2 358 aa15.49■□□□□ 0.07
PHGDH-230ENST00000641927 HCAR1Q9BXC0 346 aa15.49■□□□□ 0.07
PHGDH-230ENST00000641927 OR51V1Q9H2C8 321 aa15.49■□□□□ 0.07
PHGDH-230ENST00000641927 SRA1Q9HD15 236 aaKnown RBP15.49■□□□□ 0.07
PHGDH-230ENST00000641927 PCDHGB5Q9Y5G0 923 aa15.49■□□□□ 0.07
PHGDH-230ENST00000641927 COL6A6A6NMZ7 2263 aa15.49■□□□□ 0.07
PHGDH-230ENST00000641927 M0R3G1 203 aa15.48■□□□□ 0.07
PHGDH-230ENST00000641927 KRT33AO76009 404 aa15.48■□□□□ 0.07
PHGDH-230ENST00000641927 ZNF432O94892 652 aa15.48■□□□□ 0.07
PHGDH-230ENST00000641927 TOXO94900 526 aa15.48■□□□□ 0.07
PHGDH-230ENST00000641927 IGHV3-9P01782 118 aa15.48■□□□□ 0.07
PHGDH-230ENST00000641927 TMIGD3P0DMS9 266 aaPredicted RBP15.48■□□□□ 0.07
PHGDH-230ENST00000641927 GLI4P10075 376 aa15.48■□□□□ 0.07
PHGDH-230ENST00000641927 CLUP10909 449 aa15.48■□□□□ 0.07
PHGDH-230ENST00000641927 GABRB1P18505 474 aa15.48■□□□□ 0.07
PHGDH-230ENST00000641927 RPS7P62081 194 aaKnown RBP15.48■□□□□ 0.07
PHGDH-230ENST00000641927 FMODQ06828 376 aa15.48■□□□□ 0.07
PHGDH-230ENST00000641927 PMPCAQ10713 525 aa15.48■□□□□ 0.07
PHGDH-230ENST00000641927 CDK5R2Q13319 367 aa15.48■□□□□ 0.07
PHGDH-230ENST00000641927 TMEM123Q8N131 208 aa15.48■□□□□ 0.07
PHGDH-230ENST00000641927 FAM26EQ8N5C1 309 aa15.48■□□□□ 0.07
PHGDH-230ENST00000641927 BBS1Q8NFJ9 593 aa15.48■□□□□ 0.07
PHGDH-230ENST00000641927 APH1BQ8WW43 257 aa15.48■□□□□ 0.07
PHGDH-230ENST00000641927 PTP4A1Q93096 173 aa15.48■□□□□ 0.07
PHGDH-230ENST00000641927 APH1AQ96BI3 265 aa15.48■□□□□ 0.07
PHGDH-230ENST00000641927 Q96MT0 163 aa15.48■□□□□ 0.07
PHGDH-230ENST00000641927 RBP7Q96R05 134 aa15.48■□□□□ 0.07
PHGDH-230ENST00000641927 ALG12Q9BV10 488 aa15.48■□□□□ 0.07
PHGDH-230ENST00000641927 MRPL13Q9BYD1 178 aaKnown RBP15.48■□□□□ 0.07
PHGDH-230ENST00000641927 NUAK2Q9H093 628 aa15.48■□□□□ 0.07
PHGDH-230ENST00000641927 UBAP1Q9NZ09 502 aa15.48■□□□□ 0.07
PHGDH-230ENST00000641927 VSX1Q9NZR4 365 aaPredicted RBP15.48■□□□□ 0.07
PHGDH-230ENST00000641927 LRCH1Q9Y2L9 728 aa15.48■□□□□ 0.07
PHGDH-230ENST00000641927 EIF4E1BA6NMX2 242 aaKnown RBP15.48■□□□□ 0.07
PHGDH-230ENST00000641927 FAM171A2A8MVW0 826 aa15.48■□□□□ 0.07
PHGDH-230ENST00000641927 SLC16A7O60669 478 aa15.48■□□□□ 0.07
PHGDH-230ENST00000641927 ENTPD6O75354 484 aa15.48■□□□□ 0.07
PHGDH-230ENST00000641927 FMO3P31513 532 aa15.48■□□□□ 0.07
PHGDH-230ENST00000641927 TIMP3P35625 211 aa15.48■□□□□ 0.07
PHGDH-230ENST00000641927 CENPAP49450 140 aa15.48■□□□□ 0.07
PHGDH-230ENST00000641927 LGALS3BPQ08380 585 aa15.48■□□□□ 0.07
PHGDH-230ENST00000641927 FOXF2Q12947 444 aa15.48■□□□□ 0.07
PHGDH-230ENST00000641927 UBE2J2Q8N2K1 259 aa15.48■□□□□ 0.07
PHGDH-230ENST00000641927 GPR137CQ8N3F9 429 aa15.48■□□□□ 0.07
PHGDH-230ENST00000641927 MARVELD2Q8N4S9 558 aa15.48■□□□□ 0.07
PHGDH-230ENST00000641927 PROKR2Q8NFJ6 384 aa15.48■□□□□ 0.07
PHGDH-230ENST00000641927 OR51L1Q8NGJ5 315 aa15.48■□□□□ 0.07
PHGDH-230ENST00000641927 NSMAFQ92636 917 aa15.48■□□□□ 0.07
PHGDH-230ENST00000641927 ZNF582Q96NG8 517 aaPredicted RBP15.48■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms