RNA–Protein interactions for RNA: ENST00000622836.1

PCDHGC3-208, Transcript of protocadherin gamma subfamily C, 3, humanhuman

TSL 3

Gene PCDHGC3, Length 795 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-208ENST00000622836 SPOCK1Q08629 439 aa12.21□□□□□ -0.45
PCDHGC3-208ENST00000622836 TAF11Q15544 211 aa12.21□□□□□ -0.45
PCDHGC3-208ENST00000622836 MTX3Q5HYI7 312 aa12.21□□□□□ -0.45
PCDHGC3-208ENST00000622836 TSEN54Q7Z6J9 526 aaKnown RBP12.21□□□□□ -0.45
PCDHGC3-208ENST00000622836 IGFN1Q86VF2 1251 aa12.21□□□□□ -0.45
PCDHGC3-208ENST00000622836 ZDHHC21Q8IVQ6 265 aa12.21□□□□□ -0.45
PCDHGC3-208ENST00000622836 OR13C2Q8NGS9 318 aa12.21□□□□□ -0.45
PCDHGC3-208ENST00000622836 LILRB1Q8NHL6 650 aaPredicted RBP12.21□□□□□ -0.45
PCDHGC3-208ENST00000622836 SLC7A13Q8TCU3 470 aa12.21□□□□□ -0.45
PCDHGC3-208ENST00000622836 TMEM54Q969K7 222 aa12.21□□□□□ -0.45
PCDHGC3-208ENST00000622836 CCDC124Q96CT7 223 aaKnown RBP12.21□□□□□ -0.45
PCDHGC3-208ENST00000622836 BOD1Q96IK1 185 aa12.21□□□□□ -0.45
PCDHGC3-208ENST00000622836 FAM46AQ96IP4 442 aaKnown RBP12.21□□□□□ -0.45
PCDHGC3-208ENST00000622836 LRGUKQ96M69 825 aa12.21□□□□□ -0.45
PCDHGC3-208ENST00000622836 SEPHS2Q99611 448 aa12.21□□□□□ -0.45
PCDHGC3-208ENST00000622836 FOXB1Q99853 325 aa12.21□□□□□ -0.45
PCDHGC3-208ENST00000622836 THTPAQ9BU02 230 aa12.21□□□□□ -0.45
PCDHGC3-208ENST00000622836 C1orf21Q9H246 121 aa12.21□□□□□ -0.45
PCDHGC3-208ENST00000622836 MUC13Q9H3R2 512 aa12.21□□□□□ -0.45
PCDHGC3-208ENST00000622836 CXorf56Q9H5V9 222 aa12.21□□□□□ -0.45
PCDHGC3-208ENST00000622836 MOV10Q9HCE1 1003 aaKnown RBP12.21□□□□□ -0.45
PCDHGC3-208ENST00000622836 FAIMQ9NVQ4 179 aa12.21□□□□□ -0.45
PCDHGC3-208ENST00000622836 CISD1Q9NZ45 108 aaKnown RBP12.21□□□□□ -0.45
PCDHGC3-208ENST00000622836 LAMP3Q9UQV4 416 aa12.21□□□□□ -0.45
PCDHGC3-208ENST00000622836 ATP23Q9Y6H3 246 aa12.21□□□□□ -0.45
PCDHGC3-208ENST00000622836 DSCAMO60469 2012 aa12.21□□□□□ -0.46
PCDHGC3-208ENST00000622836 GYG2O15488 501 aa12.2□□□□□ -0.46
PCDHGC3-208ENST00000622836 QDPRP09417 244 aa12.2□□□□□ -0.46
PCDHGC3-208ENST00000622836 PGA4P0DJD7 388 aa12.2□□□□□ -0.46
PCDHGC3-208ENST00000622836 PGA3P0DJD8 388 aa12.2□□□□□ -0.46
PCDHGC3-208ENST00000622836 CD79AP11912 226 aa12.2□□□□□ -0.46
PCDHGC3-208ENST00000622836 ATP6V1B2P21281 511 aa12.2□□□□□ -0.46
PCDHGC3-208ENST00000622836 CTXN1P60606 82 aa12.2□□□□□ -0.46
PCDHGC3-208ENST00000622836 MYBPC1Q00872 1141 aa12.2□□□□□ -0.46
PCDHGC3-208ENST00000622836 NPRL3Q12980 569 aa12.2□□□□□ -0.46
PCDHGC3-208ENST00000622836 TRIM25Q14258 630 aaKnown RBP12.2□□□□□ -0.46
PCDHGC3-208ENST00000622836 TESK1Q15569 626 aa12.2□□□□□ -0.46
PCDHGC3-208ENST00000622836 ANKDD1AQ495B1 522 aa12.2□□□□□ -0.46
PCDHGC3-208ENST00000622836 DNAL1Q4LDG9 190 aa12.2□□□□□ -0.46
PCDHGC3-208ENST00000622836 CCDC36Q8IYA8 594 aa12.2□□□□□ -0.46
PCDHGC3-208ENST00000622836 SYT14Q8NB59 555 aa12.2□□□□□ -0.46
PCDHGC3-208ENST00000622836 NOXO1Q8NFA2 376 aa12.2□□□□□ -0.46
PCDHGC3-208ENST00000622836 SMAP2Q8WU79 429 aaPredicted RBP12.2□□□□□ -0.46
PCDHGC3-208ENST00000622836 ASB10Q8WXI3 467 aa12.2□□□□□ -0.46
PCDHGC3-208ENST00000622836 NANOS1Q8WY41 292 aaKnown RBP12.2□□□□□ -0.46
PCDHGC3-208ENST00000622836 GTPBP3Q969Y2 492 aaKnown RBP12.2□□□□□ -0.46
PCDHGC3-208ENST00000622836 SLC38A2Q96QD8 506 aa12.2□□□□□ -0.46
PCDHGC3-208ENST00000622836 TNFRSF13CQ96RJ3 184 aa12.2□□□□□ -0.46
PCDHGC3-208ENST00000622836 ZNF347Q96SE7 839 aa12.2□□□□□ -0.46
PCDHGC3-208ENST00000622836 TXNIPQ9H3M7 391 aa12.2□□□□□ -0.46
PCDHGC3-208ENST00000622836 NELFAQ9H3P2 528 aa12.2□□□□□ -0.46
PCDHGC3-208ENST00000622836 TAS2R1Q9NYW7 299 aa12.2□□□□□ -0.46
PCDHGC3-208ENST00000622836 MAP1AP78559 2803 aaPredicted RBP12.2□□□□□ -0.46
PCDHGC3-208ENST00000622836 PRRC2AP48634 2157 aaKnown RBP12.19□□□□□ -0.46
PCDHGC3-208ENST00000622836 TRBV4-1A0A0J9YWV2 114 aa12.19□□□□□ -0.46
PCDHGC3-208ENST00000622836 ATP6V1G2-DDX39BF2Z307 99 aa12.19□□□□□ -0.46
PCDHGC3-208ENST00000622836 DHHO43323 396 aa12.19□□□□□ -0.46
PCDHGC3-208ENST00000622836 ENTPD5O75356 428 aa12.19□□□□□ -0.46
PCDHGC3-208ENST00000622836 CRYAAP02489 173 aa12.19□□□□□ -0.46
PCDHGC3-208ENST00000622836 SEMG1P04279 462 aa12.19□□□□□ -0.46
PCDHGC3-208ENST00000622836 TSPAN19P0C672 248 aa12.19□□□□□ -0.46
PCDHGC3-208ENST00000622836 NR2C1P13056 603 aa12.19□□□□□ -0.46
PCDHGC3-208ENST00000622836 ACADSP16219 412 aa12.19□□□□□ -0.46
PCDHGC3-208ENST00000622836 RRM2P31350 389 aa12.19□□□□□ -0.46
PCDHGC3-208ENST00000622836 ACVR1BP36896 505 aa12.19□□□□□ -0.46
PCDHGC3-208ENST00000622836 ZNF84P51523 738 aa12.19□□□□□ -0.46
PCDHGC3-208ENST00000622836 IDH3GP51553 393 aaPredicted RBP12.19□□□□□ -0.46
PCDHGC3-208ENST00000622836 RPL27P61353 136 aaKnown RBP12.19□□□□□ -0.46
PCDHGC3-208ENST00000622836 RPS4XP62701 263 aaKnown RBP12.19□□□□□ -0.46
PCDHGC3-208ENST00000622836 RUNX1T1Q06455 604 aa12.19□□□□□ -0.46
PCDHGC3-208ENST00000622836 CD47Q08722 323 aa12.19□□□□□ -0.46
PCDHGC3-208ENST00000622836 ZBED5Q49AG3 693 aa12.19□□□□□ -0.46
PCDHGC3-208ENST00000622836 SPNS3Q6ZMD2 512 aa12.19□□□□□ -0.46
PCDHGC3-208ENST00000622836 TMPRSS11FQ6ZWK6 438 aa12.19□□□□□ -0.46
PCDHGC3-208ENST00000622836 LURAP1LQ8IV03 231 aa12.19□□□□□ -0.46
PCDHGC3-208ENST00000622836 OR4K5Q8NGD3 323 aa12.19□□□□□ -0.46
PCDHGC3-208ENST00000622836 ASB9Q96DX5 294 aa12.19□□□□□ -0.46
PCDHGC3-208ENST00000622836 PERPQ96FX8 193 aa12.19□□□□□ -0.46
PCDHGC3-208ENST00000622836 CLPTM1LQ96KA5 538 aa12.19□□□□□ -0.46
PCDHGC3-208ENST00000622836 TRIM15Q9C019 465 aa12.19□□□□□ -0.46
PCDHGC3-208ENST00000622836 CXXC4Q9H2H0 198 aa12.19□□□□□ -0.46
PCDHGC3-208ENST00000622836 IL1RAPQ9NPH3 570 aa12.19□□□□□ -0.46
PCDHGC3-208ENST00000622836 TMCC3Q9ULS5 477 aa12.19□□□□□ -0.46
PCDHGC3-208ENST00000622836 HEATR1Q9H583 2144 aaKnown RBP12.19□□□□□ -0.46
PCDHGC3-208ENST00000622836 IGHV1-18A0A0C4DH31 117 aa12.18□□□□□ -0.46
PCDHGC3-208ENST00000622836 CENPBD1B2RD01 187 aa12.18□□□□□ -0.46
PCDHGC3-208ENST00000622836 CDC42EP2O14613 210 aa12.18□□□□□ -0.46
PCDHGC3-208ENST00000622836 ARHGEF9O43307 516 aa12.18□□□□□ -0.46
PCDHGC3-208ENST00000622836 OR10H3O60404 316 aa12.18□□□□□ -0.46
PCDHGC3-208ENST00000622836 TRMUO75648 421 aaKnown RBP12.18□□□□□ -0.46
PCDHGC3-208ENST00000622836 FARS2O95363 451 aaKnown RBP12.18□□□□□ -0.46
PCDHGC3-208ENST00000622836 HLA-HP01893 362 aa12.18□□□□□ -0.46
PCDHGC3-208ENST00000622836 ARR3P36575 388 aa12.18□□□□□ -0.46
PCDHGC3-208ENST00000622836 IFNGR2P38484 337 aa12.18□□□□□ -0.46
PCDHGC3-208ENST00000622836 FABP6P51161 128 aa12.18□□□□□ -0.46
PCDHGC3-208ENST00000622836 ERVK-25P63136 954 aa12.18□□□□□ -0.46
PCDHGC3-208ENST00000622836 NKX6-1P78426 367 aaPredicted RBP12.18□□□□□ -0.46
PCDHGC3-208ENST00000622836 CHRNB3Q05901 458 aa12.18□□□□□ -0.46
PCDHGC3-208ENST00000622836 PIGFQ07326 219 aa12.18□□□□□ -0.46
PCDHGC3-208ENST00000622836 SEC23BQ15437 767 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms