RNA–Protein interactions for RNA: ENST00000618970.4

PDCD6-213, Transcript of programmed cell death 6, humanhuman

TSL 3 BASIC

Gene PDCD6, Length 931 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD6-213ENST00000618970 ZNF519Q8TB69 540 aa11.81□□□□□ -0.52
PDCD6-213ENST00000618970 HDAC2Q92769 488 aaKnown RBP11.81□□□□□ -0.52
PDCD6-213ENST00000618970 TMEM54Q969K7 222 aa11.81□□□□□ -0.52
PDCD6-213ENST00000618970 APH1AQ96BI3 265 aa11.81□□□□□ -0.52
PDCD6-213ENST00000618970 SAMD8Q96LT4 415 aa11.81□□□□□ -0.52
PDCD6-213ENST00000618970 OSBPL10Q9BXB5 764 aa11.81□□□□□ -0.52
PDCD6-213ENST00000618970 MRPL13Q9BYD1 178 aaKnown RBP11.81□□□□□ -0.52
PDCD6-213ENST00000618970 LINC00470Q9BZP3 86 aa11.81□□□□□ -0.52
PDCD6-213ENST00000618970 LIME1Q9H400 295 aa11.81□□□□□ -0.52
PDCD6-213ENST00000618970 PARPBPQ9NWS1 579 aa11.81□□□□□ -0.52
PDCD6-213ENST00000618970 ADAM18Q9Y3Q7 739 aa11.81□□□□□ -0.52
PDCD6-213ENST00000618970 FLNAP21333 2647 aaKnown RBP11.8□□□□□ -0.52
PDCD6-213ENST00000618970 SAC3D1A6NKF1 404 aa11.8□□□□□ -0.52
PDCD6-213ENST00000618970 BHLHE40O14503 412 aa11.8□□□□□ -0.52
PDCD6-213ENST00000618970 CTAG2O75638 210 aa11.8□□□□□ -0.52
PDCD6-213ENST00000618970 TRMUO75648 421 aaKnown RBP11.8□□□□□ -0.52
PDCD6-213ENST00000618970 SMNDC1O75940 238 aaKnown RBP eCLIP11.8□□□□□ -0.528e-9■■■■□ 21
PDCD6-213ENST00000618970 CNOT4O95628 575 aaKnown RBP11.8□□□□□ -0.52
PDCD6-213ENST00000618970 TXNDC12O95881 172 aa11.8□□□□□ -0.52
PDCD6-213ENST00000618970 BCL10O95999 233 aa11.8□□□□□ -0.52
PDCD6-213ENST00000618970 IGHV3-9P01782 118 aa11.8□□□□□ -0.52
PDCD6-213ENST00000618970 PGA4P0DJD7 388 aa11.8□□□□□ -0.52
PDCD6-213ENST00000618970 PGA3P0DJD8 388 aa11.8□□□□□ -0.52
PDCD6-213ENST00000618970 ANPEPP15144 967 aa11.8□□□□□ -0.52
PDCD6-213ENST00000618970 ZNF23P17027 643 aa11.8□□□□□ -0.52
PDCD6-213ENST00000618970 GSTM3P21266 225 aa11.8□□□□□ -0.52
PDCD6-213ENST00000618970 PCYT1AP49585 367 aa11.8□□□□□ -0.52
PDCD6-213ENST00000618970 ASCL1P50553 236 aa11.8□□□□□ -0.52
PDCD6-213ENST00000618970 ARHGDIAP52565 204 aa11.8□□□□□ -0.52
PDCD6-213ENST00000618970 RPL27P61353 136 aaKnown RBP11.8□□□□□ -0.52
PDCD6-213ENST00000618970 PPP2R2BQ00005 443 aa11.8□□□□□ -0.52
PDCD6-213ENST00000618970 IL1RL1Q01638 556 aa11.8□□□□□ -0.52
PDCD6-213ENST00000618970 FAM27E3Q08E93 113 aa11.8□□□□□ -0.52
PDCD6-213ENST00000618970 CAMK2DQ13557 499 aa11.8□□□□□ -0.52
PDCD6-213ENST00000618970 HIST3H3Q16695 136 aa11.8□□□□□ -0.52
PDCD6-213ENST00000618970 ZNF362Q5T0B9 420 aaPredicted RBP11.8□□□□□ -0.52
PDCD6-213ENST00000618970 FBXW9Q5XUX1 488 aa11.8□□□□□ -0.52
PDCD6-213ENST00000618970 DPY19L2P2Q6ZN68 376 aa11.8□□□□□ -0.52
PDCD6-213ENST00000618970 STK32CQ86UX6 486 aa11.8□□□□□ -0.52
PDCD6-213ENST00000618970 C20orf196Q8IYI0 205 aa11.8□□□□□ -0.52
PDCD6-213ENST00000618970 ICA1LQ8NDH6 482 aa11.8□□□□□ -0.52
PDCD6-213ENST00000618970 OR4Q3Q8NH05 313 aa11.8□□□□□ -0.52
PDCD6-213ENST00000618970 FANK1Q8TC84 345 aa11.8□□□□□ -0.52
PDCD6-213ENST00000618970 NMD3Q96D46 503 aaKnown RBP11.8□□□□□ -0.52
PDCD6-213ENST00000618970 ZNF837Q96EG3 531 aaPredicted RBP11.8□□□□□ -0.52
PDCD6-213ENST00000618970 LRR1Q96L50 414 aa11.8□□□□□ -0.52
PDCD6-213ENST00000618970 Q96M85 177 aa11.8□□□□□ -0.52
PDCD6-213ENST00000618970 KCNK17Q96T54 332 aa11.8□□□□□ -0.52
PDCD6-213ENST00000618970 DDOQ99489 341 aa11.8□□□□□ -0.52
PDCD6-213ENST00000618970 SLC29A1Q99808 456 aa11.8□□□□□ -0.52
PDCD6-213ENST00000618970 KATNB1Q9BVA0 655 aa11.8□□□□□ -0.52
PDCD6-213ENST00000618970 SLCO5A1Q9H2Y9 848 aa11.8□□□□□ -0.52
PDCD6-213ENST00000618970 CDH10Q9Y6N8 788 aa11.8□□□□□ -0.52
PDCD6-213ENST00000618970 A0A1W2PRG6 482 aa11.79□□□□□ -0.52
PDCD6-213ENST00000618970 EEF1E1-BLOC1S5C9J1V9 151 aa11.79□□□□□ -0.52
PDCD6-213ENST00000618970 IMPA2O14732 288 aa11.79□□□□□ -0.52
PDCD6-213ENST00000618970 EEF1E1O43324 174 aaKnown RBP11.79□□□□□ -0.52
PDCD6-213ENST00000618970 MITFO75030 526 aaPredicted RBP11.79□□□□□ -0.52
PDCD6-213ENST00000618970 ITGA5P08648 1049 aa11.79□□□□□ -0.52
PDCD6-213ENST00000618970 ACADSP16219 412 aa11.79□□□□□ -0.52
PDCD6-213ENST00000618970 IGHV1-2P23083 117 aa11.79□□□□□ -0.52
PDCD6-213ENST00000618970 ZNF133P52736 654 aaPredicted RBP11.79□□□□□ -0.52
PDCD6-213ENST00000618970 RCN1Q15293 331 aa11.79□□□□□ -0.52
PDCD6-213ENST00000618970 TAF11Q15544 211 aa11.79□□□□□ -0.52
PDCD6-213ENST00000618970 MESTQ5EB52 335 aa11.79□□□□□ -0.52
PDCD6-213ENST00000618970 LRFN4Q6PJG9 635 aa11.79□□□□□ -0.52
PDCD6-213ENST00000618970 Q6ZT83 130 aa11.79□□□□□ -0.52
PDCD6-213ENST00000618970 BEND4Q6ZU67 534 aa11.79□□□□□ -0.52
PDCD6-213ENST00000618970 C22orf34Q6ZV56 151 aa11.79□□□□□ -0.52
PDCD6-213ENST00000618970 ZDHHC13Q8IUH4 622 aa11.79□□□□□ -0.52
PDCD6-213ENST00000618970 ZNF100Q8IYN0 542 aa11.79□□□□□ -0.52
PDCD6-213ENST00000618970 SLC25A44Q96H78 314 aaPredicted RBP11.79□□□□□ -0.52
PDCD6-213ENST00000618970 ADAD1Q96M93 576 aaKnown RBP11.79□□□□□ -0.52
PDCD6-213ENST00000618970 TMUB1Q9BVT8 246 aa11.79□□□□□ -0.52
PDCD6-213ENST00000618970 RBM24Q9BX46 236 aaKnown RBP11.79□□□□□ -0.52
PDCD6-213ENST00000618970 CXXC4Q9H2H0 198 aa11.79□□□□□ -0.52
PDCD6-213ENST00000618970 SLC24A3Q9HC58 644 aa11.79□□□□□ -0.52
PDCD6-213ENST00000618970 GALNT8Q9NY28 637 aa11.79□□□□□ -0.52
PDCD6-213ENST00000618970 CRIM1Q9NZV1 1036 aa11.79□□□□□ -0.52
PDCD6-213ENST00000618970 NKX1-2Q9UD57 310 aaPredicted RBP11.79□□□□□ -0.52
PDCD6-213ENST00000618970 MALT1Q9UDY8 824 aa11.79□□□□□ -0.52
PDCD6-213ENST00000618970 IER3IP1Q9Y5U9 82 aa11.79□□□□□ -0.52
PDCD6-213ENST00000618970 ABCA4P78363 2273 aa11.79□□□□□ -0.52
PDCD6-213ENST00000618970 IGKV1D-43A0A0B4J1Z2 117 aa11.78□□□□□ -0.52
PDCD6-213ENST00000618970 ZNF726A6NNF4 738 aa11.78□□□□□ -0.52
PDCD6-213ENST00000618970 CENPBD1B2RD01 187 aa11.78□□□□□ -0.52
PDCD6-213ENST00000618970 E9PQ18 207 aa11.78□□□□□ -0.52
PDCD6-213ENST00000618970 RPL36A-HNRNPH2H7BZ11 118 aa11.78□□□□□ -0.52
PDCD6-213ENST00000618970 ARPC3O15145 178 aa11.78□□□□□ -0.52
PDCD6-213ENST00000618970 SOX14O95416 240 aa11.78□□□□□ -0.52
PDCD6-213ENST00000618970 PPP1R3DO95685 299 aa11.78□□□□□ -0.52
PDCD6-213ENST00000618970 BAG2O95816 211 aa11.78□□□□□ -0.52
PDCD6-213ENST00000618970 OSMP13725 252 aa11.78□□□□□ -0.52
PDCD6-213ENST00000618970 APEHP13798 732 aaKnown RBP11.78□□□□□ -0.52
PDCD6-213ENST00000618970 COX5AP20674 150 aa11.78□□□□□ -0.52
PDCD6-213ENST00000618970 CCKARP32238 428 aa11.78□□□□□ -0.52
PDCD6-213ENST00000618970 RPL4P36578 427 aaKnown RBP11.78□□□□□ -0.52
PDCD6-213ENST00000618970 ACVR1BP36896 505 aa11.78□□□□□ -0.52
PDCD6-213ENST00000618970 CD79BP40259 229 aa11.78□□□□□ -0.52
PDCD6-213ENST00000618970 SLC36A3Q495N2 470 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms