RNA–Protein interactions for RNA: ENST00000618327.4

CIITA-213, Transcript of class II major histocompatibility complex transactivator, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CIITA, Length 4,657 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-213ENST00000618327 SLC6A7Q99884 636 aa12.68□□□□□ -0.38
CIITA-213ENST00000618327 OR10A4Q9H209 315 aa12.68□□□□□ -0.38
CIITA-213ENST00000618327 C1orf198Q9H425 327 aa12.68□□□□□ -0.38
CIITA-213ENST00000618327 FKRPQ9H9S5 495 aa12.68□□□□□ -0.38
CIITA-213ENST00000618327 SLC25A19Q9HC21 320 aa12.68□□□□□ -0.38
CIITA-213ENST00000618327 C1orf196B1AJZ1 125 aa12.68□□□□□ -0.38
CIITA-213ENST00000618327 SLC2A10O95528 541 aa12.68□□□□□ -0.38
CIITA-213ENST00000618327 CBX7O95931 251 aa12.68□□□□□ -0.38
CIITA-213ENST00000618327 PAHP00439 452 aa12.68□□□□□ -0.38
CIITA-213ENST00000618327 WNT1P04628 370 aa12.68□□□□□ -0.38
CIITA-213ENST00000618327 ABCD3P28288 659 aa12.68□□□□□ -0.38
CIITA-213ENST00000618327 LIPAP38571 399 aa12.68□□□□□ -0.38
CIITA-213ENST00000618327 RPS25P62851 125 aaKnown RBP12.68□□□□□ -0.38
CIITA-213ENST00000618327 HBMQ6B0K9 141 aa12.68□□□□□ -0.38
CIITA-213ENST00000618327 DESI1Q6ICB0 168 aa12.68□□□□□ -0.38
CIITA-213ENST00000618327 OR52N1Q8NH53 320 aa12.68□□□□□ -0.38
CIITA-213ENST00000618327 LYRM1O43325 122 aa12.68□□□□□ -0.38
CIITA-213ENST00000618327 UPK1BO75841 260 aa12.68□□□□□ -0.38
CIITA-213ENST00000618327 EIF3IQ13347 325 aaKnown RBP12.68□□□□□ -0.38
CIITA-213ENST00000618327 CNIH2Q6PI25 160 aa12.68□□□□□ -0.38
CIITA-213ENST00000618327 NOXA1Q86UR1 476 aa12.68□□□□□ -0.38
CIITA-213ENST00000618327 WDR5BQ86VZ2 330 aa12.68□□□□□ -0.38
CIITA-213ENST00000618327 GRAMD2AQ8IUY3 354 aa12.68□□□□□ -0.38
CIITA-213ENST00000618327 ZNF454Q8N9F8 522 aa12.68□□□□□ -0.38
CIITA-213ENST00000618327 GHSRQ92847 366 aa12.68□□□□□ -0.38
CIITA-213ENST00000618327 FAM46BQ96A09 425 aa12.68□□□□□ -0.38
CIITA-213ENST00000618327 SGCZQ96LD1 299 aa12.68□□□□□ -0.38
CIITA-213ENST00000618327 VWA8A3KMH1 1905 aa12.68□□□□□ -0.38
CIITA-213ENST00000618327 CCDC163A0A0D9SF12 145 aa12.67□□□□□ -0.38
CIITA-213ENST00000618327 ARGFXA6NJG6 315 aa12.67□□□□□ -0.38
CIITA-213ENST00000618327 H7C417 338 aa12.67□□□□□ -0.38
CIITA-213ENST00000618327 MT-CO3P00414 261 aa12.67□□□□□ -0.38
CIITA-213ENST00000618327 HIST1H1CP16403 213 aaKnown RBP12.67□□□□□ -0.38
CIITA-213ENST00000618327 S100PP25815 95 aa12.67□□□□□ -0.38
CIITA-213ENST00000618327 ZNF616Q08AN1 781 aa12.67□□□□□ -0.38
CIITA-213ENST00000618327 PRTGQ2VWP7 1150 aa12.67□□□□□ -0.38
CIITA-213ENST00000618327 AWAT2Q6E213 333 aa12.67□□□□□ -0.38
CIITA-213ENST00000618327 SLC5A7Q9GZV3 580 aa12.67□□□□□ -0.38
CIITA-213ENST00000618327 CDH20Q9HBT6 801 aa12.67□□□□□ -0.38
CIITA-213ENST00000618327 ZNF226Q9NYT6 803 aa12.67□□□□□ -0.38
CIITA-213ENST00000618327 GPR55Q9Y2T6 319 aaPredicted RBP12.67□□□□□ -0.38
CIITA-213ENST00000618327 HMX3A6NHT5 357 aa12.67□□□□□ -0.38
CIITA-213ENST00000618327 IFNGR1P15260 489 aa12.67□□□□□ -0.38
CIITA-213ENST00000618327 TBXA2RP21731 343 aa12.67□□□□□ -0.38
CIITA-213ENST00000618327 PCBD1P61457 104 aa12.67□□□□□ -0.38
CIITA-213ENST00000618327 ZXDCQ2QGD7 858 aaPredicted RBP12.67□□□□□ -0.38
CIITA-213ENST00000618327 NDUFAF7Q7L592 441 aa12.67□□□□□ -0.38
CIITA-213ENST00000618327 PRSS42Q7Z5A4 293 aa12.67□□□□□ -0.38
CIITA-213ENST00000618327 CNEP1R1Q8N9A8 125 aa12.67□□□□□ -0.38
CIITA-213ENST00000618327 ANKRD9Q96BM1 317 aaPredicted RBP12.67□□□□□ -0.38
CIITA-213ENST00000618327 SPACA9Q96E40 222 aaPredicted RBP12.67□□□□□ -0.38
CIITA-213ENST00000618327 NEDD4LQ96PU5 975 aa12.67□□□□□ -0.38
CIITA-213ENST00000618327 CENPOQ9BU64 300 aa12.67□□□□□ -0.38
CIITA-213ENST00000618327 FBXO34Q9NWN3 711 aa12.67□□□□□ -0.38
CIITA-213ENST00000618327 CYR61O00622 381 aa12.67□□□□□ -0.38
CIITA-213ENST00000618327 SBK2P0C263 348 aa12.67□□□□□ -0.38
CIITA-213ENST00000618327 KRBOX4Q5JUW0 171 aa12.67□□□□□ -0.38
CIITA-213ENST00000618327 GTPBP8Q8N3Z3 284 aaPredicted RBP12.67□□□□□ -0.38
CIITA-213ENST00000618327 ZNF709Q8N972 641 aa12.67□□□□□ -0.38
CIITA-213ENST00000618327 MRI1Q9BV20 369 aa12.67□□□□□ -0.38
CIITA-213ENST00000618327 OR10A2Q9H208 303 aa12.67□□□□□ -0.38
CIITA-213ENST00000618327 LRFN1Q9P244 771 aa12.67□□□□□ -0.38
CIITA-213ENST00000618327 RASD1Q9Y272 281 aa12.67□□□□□ -0.38
CIITA-213ENST00000618327 V9GY05 133 aa12.67□□□□□ -0.38
CIITA-213ENST00000618327 DOCK6Q96HP0 2047 aa12.67□□□□□ -0.38
CIITA-213ENST00000618327 LOC102725191A0A1B0GVB3 256 aa12.67□□□□□ -0.38
CIITA-213ENST00000618327 D6RAR5 112 aa12.67□□□□□ -0.38
CIITA-213ENST00000618327 GABARAPO95166 117 aa12.67□□□□□ -0.38
CIITA-213ENST00000618327 GNMTQ14749 295 aa12.67□□□□□ -0.38
CIITA-213ENST00000618327 MPEG1Q2M385 716 aa12.67□□□□□ -0.38
CIITA-213ENST00000618327 YRDCQ86U90 279 aaKnown RBP12.67□□□□□ -0.38
CIITA-213ENST00000618327 SIMC1Q8NDZ2 872 aa12.67□□□□□ -0.38
CIITA-213ENST00000618327 SCARF2Q96GP6 870 aaPredicted RBP12.67□□□□□ -0.38
CIITA-213ENST00000618327 CHST11Q9NPF2 352 aa12.67□□□□□ -0.38
CIITA-213ENST00000618327 BIN3Q9NQY0 253 aa12.67□□□□□ -0.38
CIITA-213ENST00000618327 A0A0G2JMP0 313 aa12.66□□□□□ -0.38
CIITA-213ENST00000618327 RAB3AP20336 220 aa12.66□□□□□ -0.38
CIITA-213ENST00000618327 PITPNBP48739 271 aa12.66□□□□□ -0.38
CIITA-213ENST00000618327 RPL18Q07020 188 aaKnown RBP12.66□□□□□ -0.38
CIITA-213ENST00000618327 C10orf111Q8N326 155 aa12.66□□□□□ -0.38
CIITA-213ENST00000618327 LRRC18Q8N456 261 aa12.66□□□□□ -0.38
CIITA-213ENST00000618327 NANOGP1Q8N7R0 232 aa12.66□□□□□ -0.38
CIITA-213ENST00000618327 OR4M2Q8NGB6 313 aa12.66□□□□□ -0.38
CIITA-213ENST00000618327 OR5D14Q8NGL3 314 aa12.66□□□□□ -0.38
CIITA-213ENST00000618327 OR14K1Q8NGZ2 314 aa12.66□□□□□ -0.38
CIITA-213ENST00000618327 ELMOD3Q96FG2 381 aa12.66□□□□□ -0.38
CIITA-213ENST00000618327 NOSIPQ9Y314 301 aaKnown RBP12.66□□□□□ -0.38
CIITA-213ENST00000618327 SCN3AQ9NY46 2000 aa12.66□□□□□ -0.38
CIITA-213ENST00000618327 SELENOFO60613 162 aa12.66□□□□□ -0.38
CIITA-213ENST00000618327 TMEM225BP0DP42 221 aa12.66□□□□□ -0.38
CIITA-213ENST00000618327 SDHAP31040 664 aa12.66□□□□□ -0.38
CIITA-213ENST00000618327 APLNRP35414 380 aa12.66□□□□□ -0.38
CIITA-213ENST00000618327 SELENBP1Q13228 472 aa12.66□□□□□ -0.38
CIITA-213ENST00000618327 RNASE10Q5GAN6 216 aaKnown RBP12.66□□□□□ -0.38
CIITA-213ENST00000618327 CHCHD2P9Q5T1J5 151 aaPredicted RBP12.66□□□□□ -0.38
CIITA-213ENST00000618327 ZNF529Q6P280 563 aa12.66□□□□□ -0.38
CIITA-213ENST00000618327 ANKRD37Q7Z713 158 aa12.66□□□□□ -0.38
CIITA-213ENST00000618327 TPRA1Q86W33 373 aa12.66□□□□□ -0.38
CIITA-213ENST00000618327 NPRL2Q8WTW4 380 aa12.66□□□□□ -0.38
CIITA-213ENST00000618327 SLC25A44Q96H78 314 aaPredicted RBP12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms