RNA–Protein interactions for RNA: ENST00000615606.4

CLTCL1-208, Transcript of clathrin heavy chain like 1, humanhuman

TSL 1 (best)

Gene CLTCL1, Length 4,994 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-208ENST00000615606 CDHR4A6H8M9 788 aa8.62□□□□□ -1.03
CLTCL1-208ENST00000615606 SLC22A20A6NK97 555 aa8.62□□□□□ -1.03
CLTCL1-208ENST00000615606 SGCEO43556 437 aa8.62□□□□□ -1.03
CLTCL1-208ENST00000615606 IGHA2P01877 340 aa8.62□□□□□ -1.03
CLTCL1-208ENST00000615606 ACKR1Q16570 336 aa8.62□□□□□ -1.03
CLTCL1-208ENST00000615606 MPEG1Q2M385 716 aa8.62□□□□□ -1.03
CLTCL1-208ENST00000615606 PRTGQ2VWP7 1150 aa8.62□□□□□ -1.03
CLTCL1-208ENST00000615606 THEM4Q5T1C6 240 aa8.62□□□□□ -1.03
CLTCL1-208ENST00000615606 GFRALQ6UXV0 394 aa8.62□□□□□ -1.03
CLTCL1-208ENST00000615606 RIMKLAQ8IXN7 391 aa8.62□□□□□ -1.03
CLTCL1-208ENST00000615606 GDPD1Q8N9F7 314 aa8.62□□□□□ -1.03
CLTCL1-208ENST00000615606 NTNG1Q9Y2I2 539 aa8.62□□□□□ -1.03
CLTCL1-208ENST00000615606 TRGV5A0A0B4J1U4 118 aa8.61□□□□□ -1.03
CLTCL1-208ENST00000615606 FXYD1O00168 92 aa8.61□□□□□ -1.03
CLTCL1-208ENST00000615606 HPP00738 406 aa8.61□□□□□ -1.03
CLTCL1-208ENST00000615606 BMXP51813 675 aa8.61□□□□□ -1.03
CLTCL1-208ENST00000615606 TEKQ02763 1124 aa8.61□□□□□ -1.03
CLTCL1-208ENST00000615606 P2RY14Q15391 338 aa8.61□□□□□ -1.03
CLTCL1-208ENST00000615606 OR2A2Q6IF42 318 aa8.61□□□□□ -1.03
CLTCL1-208ENST00000615606 RAB12Q6IQ22 244 aa8.61□□□□□ -1.03
CLTCL1-208ENST00000615606 ENTHD1Q8IYW4 607 aa8.61□□□□□ -1.03
CLTCL1-208ENST00000615606 CCDC71LQ8N9Z2 235 aa8.61□□□□□ -1.03
CLTCL1-208ENST00000615606 RHOXF1Q8NHV9 184 aa8.61□□□□□ -1.03
CLTCL1-208ENST00000615606 TBC1D15Q8TC07 691 aa8.61□□□□□ -1.03
CLTCL1-208ENST00000615606 COG8Q96MW5 612 aa8.61□□□□□ -1.03
CLTCL1-208ENST00000615606 EMC6Q9BV81 110 aa8.61□□□□□ -1.03
CLTCL1-208ENST00000615606 TSPAN10Q9H1Z9 355 aaPredicted RBP8.61□□□□□ -1.03
CLTCL1-208ENST00000615606 BCAS1O75363 584 aaPredicted RBP8.61□□□□□ -1.03
CLTCL1-208ENST00000615606 SNAPC5O75971 98 aa8.61□□□□□ -1.03
CLTCL1-208ENST00000615606 AMY2AP04746 511 aa8.61□□□□□ -1.03
CLTCL1-208ENST00000615606 QDPRP09417 244 aa8.61□□□□□ -1.03
CLTCL1-208ENST00000615606 CCL4P13236 92 aa8.61□□□□□ -1.03
CLTCL1-208ENST00000615606 GABRA5P31644 462 aa8.61□□□□□ -1.03
CLTCL1-208ENST00000615606 PTGS2P35354 604 aa8.61□□□□□ -1.03
CLTCL1-208ENST00000615606 RFC3P40938 356 aa8.61□□□□□ -1.03
CLTCL1-208ENST00000615606 MTCP1P56278 107 aa8.61□□□□□ -1.03
CLTCL1-208ENST00000615606 PRICKLE4Q2TBC4 344 aa8.61□□□□□ -1.03
CLTCL1-208ENST00000615606 FCRLAQ7L513 359 aa8.61□□□□□ -1.03
CLTCL1-208ENST00000615606 DCXRQ7Z4W1 244 aa8.61□□□□□ -1.03
CLTCL1-208ENST00000615606 GALNT16Q8N428 558 aa8.61□□□□□ -1.03
CLTCL1-208ENST00000615606 CPNE4Q96A23 557 aaPredicted RBP8.61□□□□□ -1.03
CLTCL1-208ENST00000615606 INTS12Q96CB8 462 aaKnown RBP8.61□□□□□ -1.03
CLTCL1-208ENST00000615606 SYNPO2LQ9H987 977 aa8.61□□□□□ -1.03
CLTCL1-208ENST00000615606 MYEF2Q9P2K5 600 aaKnown RBP8.61□□□□□ -1.03
CLTCL1-208ENST00000615606 B3GAT1Q9P2W7 334 aa8.61□□□□□ -1.03
CLTCL1-208ENST00000615606 MYOTQ9UBF9 498 aa8.61□□□□□ -1.03
CLTCL1-208ENST00000615606 KCNN3Q9UGI6 736 aa8.61□□□□□ -1.03
CLTCL1-208ENST00000615606 DUSP13Q9UII6 198 aa8.61□□□□□ -1.03
CLTCL1-208ENST00000615606 A0A1B0GVC2 190 aa8.61□□□□□ -1.03
CLTCL1-208ENST00000615606 SCGB2A1O75556 95 aa8.61□□□□□ -1.03
CLTCL1-208ENST00000615606 EML2O95834 649 aa8.61□□□□□ -1.03
CLTCL1-208ENST00000615606 IGHV3-9P01782 118 aa8.61□□□□□ -1.03
CLTCL1-208ENST00000615606 GABRR1P24046 479 aa8.61□□□□□ -1.03
CLTCL1-208ENST00000615606 BDKRB2P30411 391 aa8.61□□□□□ -1.03
CLTCL1-208ENST00000615606 RPL18Q07020 188 aaKnown RBP8.61□□□□□ -1.03
CLTCL1-208ENST00000615606 PLPP5Q8NEB5 264 aa8.61□□□□□ -1.03
CLTCL1-208ENST00000615606 ZNF431Q8TF32 576 aaPredicted RBP8.61□□□□□ -1.03
CLTCL1-208ENST00000615606 ITFG2Q969R8 447 aa8.61□□□□□ -1.03
CLTCL1-208ENST00000615606 MIB2Q96AX9 1013 aa8.61□□□□□ -1.03
CLTCL1-208ENST00000615606 ZNF764Q96H86 408 aaPredicted RBP8.61□□□□□ -1.03
CLTCL1-208ENST00000615606 GABARAPL1Q9H0R8 117 aa8.61□□□□□ -1.03
CLTCL1-208ENST00000615606 PLA2G3Q9NZ20 509 aa8.61□□□□□ -1.03
CLTCL1-208ENST00000615606 TCFL5Q9UL49 500 aa8.61□□□□□ -1.03
CLTCL1-208ENST00000615606 HSPB11Q9Y547 144 aa8.61□□□□□ -1.03
CLTCL1-208ENST00000615606 TIMM10BQ9Y5J6 103 aa8.61□□□□□ -1.03
CLTCL1-208ENST00000615606 ARRDC5A6NEK1 342 aa8.61□□□□□ -1.03
CLTCL1-208ENST00000615606 ZSCAN5BA6NJL1 495 aa8.61□□□□□ -1.03
CLTCL1-208ENST00000615606 ACTL6BO94805 426 aa8.61□□□□□ -1.03
CLTCL1-208ENST00000615606 IL1AP01583 271 aa8.61□□□□□ -1.03
CLTCL1-208ENST00000615606 HOXB3P14651 431 aaPredicted RBP8.61□□□□□ -1.03
CLTCL1-208ENST00000615606 ZNF26P17031 533 aaPredicted RBP8.61□□□□□ -1.03
CLTCL1-208ENST00000615606 ARR3P36575 388 aa8.61□□□□□ -1.03
CLTCL1-208ENST00000615606 RIPPLY1Q0D2K3 151 aa8.61□□□□□ -1.03
CLTCL1-208ENST00000615606 ALKBH1Q13686 389 aaKnown RBP8.61□□□□□ -1.03
CLTCL1-208ENST00000615606 ZMYND11Q15326 602 aa8.61□□□□□ -1.03
CLTCL1-208ENST00000615606 NTRK2Q16620 822 aa8.61□□□□□ -1.03
CLTCL1-208ENST00000615606 Q499Y3 187 aa8.61□□□□□ -1.03
CLTCL1-208ENST00000615606 C6orf183Q5T699 404 aa8.61□□□□□ -1.03
CLTCL1-208ENST00000615606 B3GLCTQ6Y288 498 aa8.61□□□□□ -1.03
CLTCL1-208ENST00000615606 WDR88Q6ZMY6 472 aa8.61□□□□□ -1.03
CLTCL1-208ENST00000615606 ESPNLQ6ZVH7 1005 aa8.61□□□□□ -1.03
CLTCL1-208ENST00000615606 AMER3Q8N944 861 aa8.61□□□□□ -1.03
CLTCL1-208ENST00000615606 OR52N1Q8NH53 320 aa8.61□□□□□ -1.03
CLTCL1-208ENST00000615606 COQ8AQ8NI60 647 aa8.61□□□□□ -1.03
CLTCL1-208ENST00000615606 M1APQ8TC57 530 aa8.61□□□□□ -1.03
CLTCL1-208ENST00000615606 CCDC120Q96HB5 630 aa8.61□□□□□ -1.03
CLTCL1-208ENST00000615606 BEX2Q9BXY8 128 aa8.61□□□□□ -1.03
CLTCL1-208ENST00000615606 BEX1Q9HBH7 125 aa8.61□□□□□ -1.03
CLTCL1-208ENST00000615606 CMC2Q9NRP2 79 aa8.61□□□□□ -1.03
CLTCL1-208ENST00000615606 SLC22A11Q9NSA0 550 aa8.61□□□□□ -1.03
CLTCL1-208ENST00000615606 TBCCD1Q9NVR7 557 aa8.61□□□□□ -1.03
CLTCL1-208ENST00000615606 RHBDD3Q9Y3P4 386 aa8.61□□□□□ -1.03
CLTCL1-208ENST00000615606 HRH3Q9Y5N1 445 aa8.61□□□□□ -1.03
CLTCL1-208ENST00000615606 SBF1O95248 1867 aa8.61□□□□□ -1.03
CLTCL1-208ENST00000615606 CLDN24A6NM45 220 aa8.6□□□□□ -1.03
CLTCL1-208ENST00000615606 B4E171 279 aa8.6□□□□□ -1.03
CLTCL1-208ENST00000615606 GABRPO00591 440 aa8.6□□□□□ -1.03
CLTCL1-208ENST00000615606 H2AFB2P0C5Z0 115 aa8.6□□□□□ -1.03
CLTCL1-208ENST00000615606 SELEP16581 610 aa8.6□□□□□ -1.03
CLTCL1-208ENST00000615606 SERPINA2P20848 420 aa8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms