RNA–Protein interactions for RNA: ENST00000612417.4

CDH1-213, Transcript of cadherin 1, humanhuman

TSL 5 BASIC

Gene CDH1, Length 2,068 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-213ENST00000612417 PHF19Q5T6S3 580 aa13.33□□□□□ -0.28
CDH1-213ENST00000612417 TCEAL6Q6IPX3 200 aa13.33□□□□□ -0.28
CDH1-213ENST00000612417 MED25Q71SY5 747 aa13.33□□□□□ -0.28
CDH1-213ENST00000612417 JAZF1Q86VZ6 243 aa13.33□□□□□ -0.28
CDH1-213ENST00000612417 PRSS58Q8IYP2 241 aa13.33□□□□□ -0.28
CDH1-213ENST00000612417 TCEAL3Q969E4 200 aa13.33□□□□□ -0.28
CDH1-213ENST00000612417 MAP6Q96JE9 813 aa13.33□□□□□ -0.28
CDH1-213ENST00000612417 CCDC74BQ96LY2 380 aa13.33□□□□□ -0.28
CDH1-213ENST00000612417 OR6C1Q96RD1 312 aa13.33□□□□□ -0.28
CDH1-213ENST00000612417 AUNIPQ9H7T9 357 aa13.33□□□□□ -0.28
CDH1-213ENST00000612417 NANSQ9NR45 359 aa13.33□□□□□ -0.28
CDH1-213ENST00000612417 PNO1Q9NRX1 252 aaKnown RBP13.33□□□□□ -0.28
CDH1-213ENST00000612417 FER1L5A0AVI2 2057 aa13.32□□□□□ -0.28
CDH1-213ENST00000612417 ACOD1A6NK06 481 aa13.32□□□□□ -0.28
CDH1-213ENST00000612417 IDSB3KWA1 339 aa13.32□□□□□ -0.28
CDH1-213ENST00000612417 GABARAPH6UMI1 98 aa13.32□□□□□ -0.28
CDH1-213ENST00000612417 ZNF593O00488 134 aaPredicted RBP13.32□□□□□ -0.28
CDH1-213ENST00000612417 IL33O95760 270 aa13.32□□□□□ -0.28
CDH1-213ENST00000612417 ADRB1P08588 477 aa13.32□□□□□ -0.28
CDH1-213ENST00000612417 SULT1A3P0DMM9 295 aa13.32□□□□□ -0.28
CDH1-213ENST00000612417 SULT1A4P0DMN0 295 aa13.32□□□□□ -0.28
CDH1-213ENST00000612417 MPLP40238 635 aa13.32□□□□□ -0.28
CDH1-213ENST00000612417 ALG10Q5BKT4 473 aa13.32□□□□□ -0.28
CDH1-213ENST00000612417 RNASE12Q5GAN4 147 aaKnown RBP13.32□□□□□ -0.28
CDH1-213ENST00000612417 PRSS45Q7RTY3 260 aa13.32□□□□□ -0.28
CDH1-213ENST00000612417 TTC9Q92623 222 aa13.32□□□□□ -0.28
CDH1-213ENST00000612417 MOGAT1Q96PD6 335 aa13.32□□□□□ -0.28
CDH1-213ENST00000612417 LMF1Q96S06 567 aa13.32□□□□□ -0.28
CDH1-213ENST00000612417 SMAD5Q99717 465 aaKnown RBP13.32□□□□□ -0.28
CDH1-213ENST00000612417 LANCL2Q9NS86 450 aa13.32□□□□□ -0.28
CDH1-213ENST00000612417 V9GY05 133 aa13.32□□□□□ -0.28
CDH1-213ENST00000612417 NAP1L6A6NFF2 107 aa13.32□□□□□ -0.28
CDH1-213ENST00000612417 A8MUA0 341 aa13.32□□□□□ -0.28
CDH1-213ENST00000612417 BLOC1S5-TXNDC5H3BN57 136 aa13.32□□□□□ -0.28
CDH1-213ENST00000612417 UPK3AO75631 287 aa13.32□□□□□ -0.28
CDH1-213ENST00000612417 ABHD16AO95870 558 aa13.32□□□□□ -0.28
CDH1-213ENST00000612417 ECDO95905 644 aaPredicted RBP13.32□□□□□ -0.28
CDH1-213ENST00000612417 MT-ND4P03905 459 aa13.32□□□□□ -0.28
CDH1-213ENST00000612417 RAB40ALP0C0E4 278 aa13.32□□□□□ -0.28
CDH1-213ENST00000612417 CALCBP10092 127 aa13.32□□□□□ -0.28
CDH1-213ENST00000612417 CXCL3P19876 107 aa13.32□□□□□ -0.28
CDH1-213ENST00000612417 MST1P26927 711 aa13.32□□□□□ -0.28
CDH1-213ENST00000612417 MAPK3P27361 379 aaPredicted RBP13.32□□□□□ -0.28
CDH1-213ENST00000612417 EGR4Q05215 589 aa13.32□□□□□ -0.28
CDH1-213ENST00000612417 VWA2Q5GFL6 755 aa13.32□□□□□ -0.28
CDH1-213ENST00000612417 ELFN2Q5R3F8 820 aa13.32□□□□□ -0.28
CDH1-213ENST00000612417 YOD1Q5VVQ6 348 aaPredicted RBP13.32□□□□□ -0.28
CDH1-213ENST00000612417 FAM220AQ7Z4H9 259 aa13.32□□□□□ -0.28
CDH1-213ENST00000612417 TIGD4Q8IY51 512 aa13.32□□□□□ -0.28
CDH1-213ENST00000612417 RAB40AQ8WXH6 277 aa13.32□□□□□ -0.28
CDH1-213ENST00000612417 OR1F2PQ96R84 312 aa13.32□□□□□ -0.28
CDH1-213ENST00000612417 SLC25A18Q9H1K4 315 aa13.32□□□□□ -0.28
CDH1-213ENST00000612417 DIABLOQ9NR28 239 aa13.32□□□□□ -0.28
CDH1-213ENST00000612417 SLC23A1Q9UHI7 598 aa13.32□□□□□ -0.28
CDH1-213ENST00000612417 ZNF222Q9UK12 451 aa13.32□□□□□ -0.28
CDH1-213ENST00000612417 MEIKINA0A087WXM9 373 aa13.31□□□□□ -0.28
CDH1-213ENST00000612417 FAM25EA8MYX2 175 aa13.31□□□□□ -0.28
CDH1-213ENST00000612417 C17orf105B2RV13 164 aa13.31□□□□□ -0.28
CDH1-213ENST00000612417 SCDO00767 359 aa13.31□□□□□ -0.28
CDH1-213ENST00000612417 GPR171O14626 319 aa13.31□□□□□ -0.28
CDH1-213ENST00000612417 KHNYNO15037 678 aaKnown RBP13.31□□□□□ -0.28
CDH1-213ENST00000612417 ZNF264O43296 627 aa13.31□□□□□ -0.28
CDH1-213ENST00000612417 OIP5O43482 229 aa13.31□□□□□ -0.28
CDH1-213ENST00000612417 M6PRP20645 277 aa13.31□□□□□ -0.28
CDH1-213ENST00000612417 MNDAP41218 407 aa13.31□□□□□ -0.28
CDH1-213ENST00000612417 PPICP45877 212 aa13.31□□□□□ -0.28
CDH1-213ENST00000612417 CCR9P51686 369 aa13.31□□□□□ -0.28
CDH1-213ENST00000612417 SLC37A1P57057 533 aa13.31□□□□□ -0.28
CDH1-213ENST00000612417 AP3S2P59780 193 aa13.31□□□□□ -0.28
CDH1-213ENST00000612417 CTXN1P60606 82 aa13.31□□□□□ -0.28
CDH1-213ENST00000612417 MRPS10P82664 201 aaKnown RBP13.31□□□□□ -0.28
CDH1-213ENST00000612417 IKZF1Q13422 519 aa13.31□□□□□ -0.28
CDH1-213ENST00000612417 ALKBH1Q13686 389 aaKnown RBP13.31□□□□□ -0.28
CDH1-213ENST00000612417 ST3GAL2Q16842 350 aa13.31□□□□□ -0.28
CDH1-213ENST00000612417 Q499Y3 187 aa13.31□□□□□ -0.28
CDH1-213ENST00000612417 HES5Q5TA89 166 aa13.31□□□□□ -0.28
CDH1-213ENST00000612417 ZBTB37Q5TC79 503 aa13.31□□□□□ -0.28
CDH1-213ENST00000612417 PWWP2BQ6NUJ5 590 aa13.31□□□□□ -0.28
CDH1-213ENST00000612417 LUZP2Q86TE4 346 aa13.31□□□□□ -0.28
CDH1-213ENST00000612417 CDC20BQ86Y33 519 aa13.31□□□□□ -0.28
CDH1-213ENST00000612417 ZNF511Q8NB15 262 aa13.31□□□□□ -0.28
CDH1-213ENST00000612417 ANGPTL6Q8NI99 470 aa13.31□□□□□ -0.28
CDH1-213ENST00000612417 ZNF431Q8TF32 576 aaPredicted RBP13.31□□□□□ -0.28
CDH1-213ENST00000612417 ATOH1Q92858 354 aaPredicted RBP13.31□□□□□ -0.28
CDH1-213ENST00000612417 MNTQ99583 582 aa13.31□□□□□ -0.28
CDH1-213ENST00000612417 LPAR4Q99677 370 aa13.31□□□□□ -0.28
CDH1-213ENST00000612417 C20orf85Q9H1P6 137 aa13.31□□□□□ -0.28
CDH1-213ENST00000612417 LIN7BQ9HAP6 207 aa13.31□□□□□ -0.28
CDH1-213ENST00000612417 MRM2Q9UI43 246 aaKnown RBP13.31□□□□□ -0.28
CDH1-213ENST00000612417 MGAT4AQ9UM21 535 aa13.31□□□□□ -0.28
CDH1-213ENST00000612417 MMACHCQ9Y4U1 282 aa13.31□□□□□ -0.28
CDH1-213ENST00000612417 NPTNQ9Y639 398 aa13.31□□□□□ -0.28
CDH1-213ENST00000612417 TRBV5-5A0A0J9YX44 114 aa13.3□□□□□ -0.28
CDH1-213ENST00000612417 PRAF2O60831 178 aa13.3□□□□□ -0.28
CDH1-213ENST00000612417 PEX14O75381 377 aa13.3□□□□□ -0.28
CDH1-213ENST00000612417 HPGDP15428 266 aa13.3□□□□□ -0.28
CDH1-213ENST00000612417 GRPRP30550 384 aa13.3□□□□□ -0.28
CDH1-213ENST00000612417 CBLN3Q6UW01 205 aa13.3□□□□□ -0.28
CDH1-213ENST00000612417 SEZ6L2Q6UXD5 910 aa13.3□□□□□ -0.28
CDH1-213ENST00000612417 STAC2Q6ZMT1 411 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms