RNA–Protein interactions for RNA: ENST00000612050.4

CBWD3-208, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best)

Gene CBWD3, Length 1,440 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-208ENST00000612050 DTX2Q86UW9 622 aa10.76□□□□□ -0.69
CBWD3-208ENST00000612050 LRRC17Q8N6Y2 441 aa10.76□□□□□ -0.69
CBWD3-208ENST00000612050 ACOT11Q8WXI4 607 aaPredicted RBP10.76□□□□□ -0.69
CBWD3-208ENST00000612050 TRAF4Q9BUZ4 470 aaPredicted RBP10.76□□□□□ -0.69
CBWD3-208ENST00000612050 HEATR1Q9H583 2144 aaKnown RBP10.76□□□□□ -0.69
CBWD3-208ENST00000612050 EGFL7Q9UHF1 273 aa10.76□□□□□ -0.69
CBWD3-208ENST00000612050 A4GNTQ9UNA3 340 aa10.76□□□□□ -0.69
CBWD3-208ENST00000612050 PRRC2AP48634 2157 aaKnown RBP10.76□□□□□ -0.69
CBWD3-208ENST00000612050 MED13LQ71F56 2210 aa10.76□□□□□ -0.69
CBWD3-208ENST00000612050 IGHV1-18A0A0C4DH31 117 aa10.75□□□□□ -0.69
CBWD3-208ENST00000612050 EFCAB9A8MZ26 197 aa10.75□□□□□ -0.69
CBWD3-208ENST00000612050 E7EQL1 145 aa10.75□□□□□ -0.69
CBWD3-208ENST00000612050 ATP6V1G2-DDX39BF2Z307 99 aa10.75□□□□□ -0.69
CBWD3-208ENST00000612050 PTHP01270 115 aa10.75□□□□□ -0.69
CBWD3-208ENST00000612050 F13BP05160 661 aa10.75□□□□□ -0.69
CBWD3-208ENST00000612050 OR8G3PP0DMU2 310 aa10.75□□□□□ -0.69
CBWD3-208ENST00000612050 B4GALT1P15291 398 aa10.75□□□□□ -0.69
CBWD3-208ENST00000612050 TCN1P20061 433 aaPredicted RBP10.75□□□□□ -0.69
CBWD3-208ENST00000612050 NUDT6P53370 316 aa10.75□□□□□ -0.69
CBWD3-208ENST00000612050 TUBA1BP68363 451 aa10.75□□□□□ -0.69
CBWD3-208ENST00000612050 TUBA4AP68366 448 aa10.75□□□□□ -0.69
CBWD3-208ENST00000612050 SLC25A3Q00325 362 aa10.75□□□□□ -0.69
CBWD3-208ENST00000612050 NAAAQ02083 359 aa10.75□□□□□ -0.69
CBWD3-208ENST00000612050 SPOCK1Q08629 439 aa10.75□□□□□ -0.69
CBWD3-208ENST00000612050 PGGHGQ32M88 737 aa10.75□□□□□ -0.69
CBWD3-208ENST00000612050 SLC36A2Q495M3 483 aa10.75□□□□□ -0.69
CBWD3-208ENST00000612050 FGD3Q5JSP0 725 aa10.75□□□□□ -0.69
CBWD3-208ENST00000612050 FAM205BPQ63HN1 556 aa10.75□□□□□ -0.69
CBWD3-208ENST00000612050 TMEM53Q6P2H8 277 aa10.75□□□□□ -0.69
CBWD3-208ENST00000612050 TUBA1AQ71U36 451 aa10.75□□□□□ -0.69
CBWD3-208ENST00000612050 LINGO2Q7L985 606 aa10.75□□□□□ -0.69
CBWD3-208ENST00000612050 SLC46A3Q7Z3Q1 461 aa10.75□□□□□ -0.69
CBWD3-208ENST00000612050 OAFQ86UD1 273 aa10.75□□□□□ -0.69
CBWD3-208ENST00000612050 LSRQ86X29 649 aaPredicted RBP10.75□□□□□ -0.69
CBWD3-208ENST00000612050 CCDC197Q8NCU1 140 aa10.75□□□□□ -0.69
CBWD3-208ENST00000612050 LIPHQ8WWY8 451 aa10.75□□□□□ -0.69
CBWD3-208ENST00000612050 NSMCE2Q96MF7 247 aa10.75□□□□□ -0.69
CBWD3-208ENST00000612050 CACNG6Q9BXT2 260 aa10.75□□□□□ -0.69
CBWD3-208ENST00000612050 RNF121Q9H920 327 aa10.75□□□□□ -0.69
CBWD3-208ENST00000612050 RHCGQ9UBD6 479 aa10.75□□□□□ -0.69
CBWD3-208ENST00000612050 CRNNQ9UBG3 495 aaPredicted RBP10.75□□□□□ -0.69
CBWD3-208ENST00000612050 FKBP7Q9Y680 259 aa10.75□□□□□ -0.69
CBWD3-208ENST00000612050 ENPP4Q9Y6X5 453 aa10.75□□□□□ -0.69
CBWD3-208ENST00000612050 CSMD1Q96PZ7 3565 aa10.75□□□□□ -0.69
CBWD3-208ENST00000612050 HRNRQ86YZ3 2850 aaPredicted RBP10.75□□□□□ -0.69
CBWD3-208ENST00000612050 A6NIZ1 184 aa10.75□□□□□ -0.69
CBWD3-208ENST00000612050 NPIPB13A6NJU9 1138 aa10.75□□□□□ -0.69
CBWD3-208ENST00000612050 NPIPB4C9JG80 1138 aa10.75□□□□□ -0.69
CBWD3-208ENST00000612050 OVOL3O00110 214 aa10.75□□□□□ -0.69
CBWD3-208ENST00000612050 DHHO43323 396 aa10.75□□□□□ -0.69
CBWD3-208ENST00000612050 SEC14L2O76054 403 aa10.75□□□□□ -0.69
CBWD3-208ENST00000612050 PDE5AO76074 875 aa10.75□□□□□ -0.69
CBWD3-208ENST00000612050 FAM107AO95990 144 aa10.75□□□□□ -0.69
CBWD3-208ENST00000612050 IGKV3-15P01624 115 aa10.75□□□□□ -0.69
CBWD3-208ENST00000612050 H1F0P07305 194 aaKnown RBP10.75□□□□□ -0.69
CBWD3-208ENST00000612050 QDPRP09417 244 aa10.75□□□□□ -0.69
CBWD3-208ENST00000612050 CECR9P0C854 216 aa10.75□□□□□ -0.69
CBWD3-208ENST00000612050 HSD17B1P14061 328 aa10.75□□□□□ -0.69
CBWD3-208ENST00000612050 ACADSP16219 412 aa10.75□□□□□ -0.69
CBWD3-208ENST00000612050 RHCEP18577 417 aa10.75□□□□□ -0.69
CBWD3-208ENST00000612050 RPL4P36578 427 aaKnown RBP10.75□□□□□ -0.69
CBWD3-208ENST00000612050 AQP2P41181 271 aa10.75□□□□□ -0.69
CBWD3-208ENST00000612050 PTDSS1P48651 473 aaKnown RBP10.75□□□□□ -0.69
CBWD3-208ENST00000612050 DSCR9P59020 149 aa10.75□□□□□ -0.69
CBWD3-208ENST00000612050 RAP1BP61224 184 aa10.75□□□□□ -0.69
CBWD3-208ENST00000612050 RAP1AP62834 184 aa10.75□□□□□ -0.69
CBWD3-208ENST00000612050 PLP2Q04941 152 aa10.75□□□□□ -0.69
CBWD3-208ENST00000612050 CD47Q08722 323 aa10.75□□□□□ -0.69
CBWD3-208ENST00000612050 CLEC12BQ2HXU8 276 aa10.75□□□□□ -0.69
CBWD3-208ENST00000612050 TSPYL5Q86VY4 417 aaPredicted RBP10.75□□□□□ -0.69
CBWD3-208ENST00000612050 NRMQ8IXM6 262 aa10.75□□□□□ -0.69
CBWD3-208ENST00000612050 RNF148Q8N7C7 305 aa10.75□□□□□ -0.69
CBWD3-208ENST00000612050 NOXO1Q8NFA2 376 aa10.75□□□□□ -0.69
CBWD3-208ENST00000612050 POP5Q969H6 163 aaKnown RBP10.75□□□□□ -0.69
CBWD3-208ENST00000612050 TMEM54Q969K7 222 aa10.75□□□□□ -0.69
CBWD3-208ENST00000612050 RBP7Q96R05 134 aa10.75□□□□□ -0.69
CBWD3-208ENST00000612050 CCT8L2Q96SF2 557 aa10.75□□□□□ -0.69
CBWD3-208ENST00000612050 CDRT15Q96T59 188 aa10.75□□□□□ -0.69
CBWD3-208ENST00000612050 RHNO1Q9BSD3 238 aa10.75□□□□□ -0.69
CBWD3-208ENST00000612050 LRMDAQ9H2I8 198 aa10.75□□□□□ -0.69
CBWD3-208ENST00000612050 C1orf198Q9H425 327 aa10.75□□□□□ -0.69
CBWD3-208ENST00000612050 GORASP2Q9H8Y8 452 aa10.75□□□□□ -0.69
CBWD3-208ENST00000612050 C20orf141Q9NUB4 165 aa10.75□□□□□ -0.69
CBWD3-208ENST00000612050 DCAF13Q9NV06 445 aaKnown RBP10.75□□□□□ -0.69
CBWD3-208ENST00000612050 AURKCQ9UQB9 309 aa10.75□□□□□ -0.69
CBWD3-208ENST00000612050 HIF3AQ9Y2N7 669 aa10.75□□□□□ -0.69
CBWD3-208ENST00000612050 SNX13Q9Y5W8 968 aa10.75□□□□□ -0.69
CBWD3-208ENST00000612050 XKRYO14609 159 aa10.74□□□□□ -0.69
CBWD3-208ENST00000612050 IGLV1-44P01699 117 aa10.74□□□□□ -0.69
CBWD3-208ENST00000612050 PGA4P0DJD7 388 aa10.74□□□□□ -0.69
CBWD3-208ENST00000612050 PGA3P0DJD8 388 aa10.74□□□□□ -0.69
CBWD3-208ENST00000612050 NPR2P20594 1047 aa10.74□□□□□ -0.69
CBWD3-208ENST00000612050 SERPINF1P36955 418 aa10.74□□□□□ -0.69
CBWD3-208ENST00000612050 IFNGR2P38484 337 aa10.74□□□□□ -0.69
CBWD3-208ENST00000612050 RPS23P62266 143 aaKnown RBP10.74□□□□□ -0.69
CBWD3-208ENST00000612050 RAB1AP62820 205 aa10.74□□□□□ -0.69
CBWD3-208ENST00000612050 PRKCDQ05655 676 aa10.74□□□□□ -0.69
CBWD3-208ENST00000612050 TOP3AQ13472 1001 aaPredicted RBP10.74□□□□□ -0.69
CBWD3-208ENST00000612050 NRN1LQ496H8 165 aa10.74□□□□□ -0.69
CBWD3-208ENST00000612050 VHLLQ6RSH7 139 aa10.74□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms