RNA–Protein interactions for RNA: ENST00000606499.1

MSH6-211, Transcript of mutS homolog 6, humanhuman

TSL 3

Gene MSH6, Length 833 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-211ENST00000606499 CGAP01215 116 aa6.79□□□□□ -1.32
MSH6-211ENST00000606499 PGA4P0DJD7 388 aa6.79□□□□□ -1.32
MSH6-211ENST00000606499 PGA3P0DJD8 388 aa6.79□□□□□ -1.32
MSH6-211ENST00000606499 APEHP13798 732 aaKnown RBP6.79□□□□□ -1.32
MSH6-211ENST00000606499 ACADSP16219 412 aa6.79□□□□□ -1.32
MSH6-211ENST00000606499 HIST1H1CP16403 213 aaKnown RBP6.79□□□□□ -1.32
MSH6-211ENST00000606499 CDH2P19022 906 aaPredicted RBP6.79□□□□□ -1.32
MSH6-211ENST00000606499 NOS3P29474 1203 aa6.79□□□□□ -1.32
MSH6-211ENST00000606499 CHRNB4P30926 498 aa6.79□□□□□ -1.32
MSH6-211ENST00000606499 GRK5P34947 590 aa6.79□□□□□ -1.32
MSH6-211ENST00000606499 OPRM1P35372 400 aa6.79□□□□□ -1.32
MSH6-211ENST00000606499 CDKN2AP42771 156 aaKnown RBP6.79□□□□□ -1.32
MSH6-211ENST00000606499 OR3A2P47893 321 aa6.79□□□□□ -1.32
MSH6-211ENST00000606499 GIPRP48546 466 aa6.79□□□□□ -1.32
MSH6-211ENST00000606499 SMSP52788 366 aa6.79□□□□□ -1.32
MSH6-211ENST00000606499 AQP4P55087 323 aa6.79□□□□□ -1.32
MSH6-211ENST00000606499 CLRN1P58418 232 aa6.79□□□□□ -1.32
MSH6-211ENST00000606499 MYBPC1Q00872 1141 aa6.79□□□□□ -1.32
MSH6-211ENST00000606499 FMODQ06828 376 aa6.79□□□□□ -1.32
MSH6-211ENST00000606499 CD47Q08722 323 aa6.79□□□□□ -1.32
MSH6-211ENST00000606499 CDSNQ15517 529 aa6.79□□□□□ -1.32
MSH6-211ENST00000606499 TSPO2Q5TGU0 170 aa6.79□□□□□ -1.32
MSH6-211ENST00000606499 SLX4IPQ5VYV7 408 aa6.79□□□□□ -1.32
MSH6-211ENST00000606499 C12orf73Q69YU5 71 aa6.79□□□□□ -1.32
MSH6-211ENST00000606499 GPR139Q6DWJ6 353 aa6.79□□□□□ -1.32
MSH6-211ENST00000606499 IZUMO2Q6UXV1 221 aa6.79□□□□□ -1.32
MSH6-211ENST00000606499 LINGO2Q7L985 606 aa6.79□□□□□ -1.32
MSH6-211ENST00000606499 LUZP2Q86TE4 346 aa6.79□□□□□ -1.32
MSH6-211ENST00000606499 ZNF100Q8IYN0 542 aa6.79□□□□□ -1.32
MSH6-211ENST00000606499 UBE2J2Q8N2K1 259 aa6.79□□□□□ -1.32
MSH6-211ENST00000606499 ZNF610Q8N9Z0 462 aa6.79□□□□□ -1.32
MSH6-211ENST00000606499 CYB561A3Q8NBI2 242 aa6.79□□□□□ -1.32
MSH6-211ENST00000606499 NOXO1Q8NFA2 376 aa6.79□□□□□ -1.32
MSH6-211ENST00000606499 OR4K13Q8NH42 304 aa6.79□□□□□ -1.32
MSH6-211ENST00000606499 OR6X1Q8NH79 312 aa6.79□□□□□ -1.32
MSH6-211ENST00000606499 HDAC2Q92769 488 aaKnown RBP6.79□□□□□ -1.32
MSH6-211ENST00000606499 ZNF566Q969W8 418 aa6.79□□□□□ -1.32
MSH6-211ENST00000606499 SLC25A44Q96H78 314 aaPredicted RBP6.79□□□□□ -1.32
MSH6-211ENST00000606499 ADAD1Q96M93 576 aaKnown RBP6.79□□□□□ -1.32
MSH6-211ENST00000606499 KCNK17Q96T54 332 aa6.79□□□□□ -1.32
MSH6-211ENST00000606499 NMNAT3Q96T66 252 aa6.79□□□□□ -1.32
MSH6-211ENST00000606499 MRPL13Q9BYD1 178 aaKnown RBP6.79□□□□□ -1.32
MSH6-211ENST00000606499 GRIP2Q9C0E4 1043 aa6.79□□□□□ -1.32
MSH6-211ENST00000606499 SLCO5A1Q9H2Y9 848 aa6.79□□□□□ -1.32
MSH6-211ENST00000606499 VCXQ9H320 206 aa6.79□□□□□ -1.32
MSH6-211ENST00000606499 SLC7A10Q9NS82 523 aa6.79□□□□□ -1.32
MSH6-211ENST00000606499 PARPBPQ9NWS1 579 aa6.79□□□□□ -1.32
MSH6-211ENST00000606499 COQ3Q9NZJ6 369 aa6.79□□□□□ -1.32
MSH6-211ENST00000606499 ZNF629Q9UEG4 869 aaPredicted RBP6.79□□□□□ -1.32
MSH6-211ENST00000606499 ENOPH1Q9UHY7 261 aa6.79□□□□□ -1.32
MSH6-211ENST00000606499 FOXD3Q9UJU5 478 aaPredicted RBP6.79□□□□□ -1.32
MSH6-211ENST00000606499 PROCRQ9UNN8 238 aa6.79□□□□□ -1.32
MSH6-211ENST00000606499 SLC5A6Q9Y289 635 aa6.79□□□□□ -1.32
MSH6-211ENST00000606499 HIVEP3Q5T1R4 2406 aa6.79□□□□□ -1.32
MSH6-211ENST00000606499 POLEQ07864 2286 aa6.78□□□□□ -1.32
MSH6-211ENST00000606499 IGKV1D-43A0A0B4J1Z2 117 aa6.78□□□□□ -1.32
MSH6-211ENST00000606499 SLC22A23A1A5C7 686 aa6.78□□□□□ -1.32
MSH6-211ENST00000606499 PRSS37A4D1T9 235 aa6.78□□□□□ -1.32
MSH6-211ENST00000606499 NKX2-6A6NCS4 301 aa6.78□□□□□ -1.32
MSH6-211ENST00000606499 A6NIZ1 184 aa6.78□□□□□ -1.32
MSH6-211ENST00000606499 FAM183AA6NL82 134 aa6.78□□□□□ -1.32
MSH6-211ENST00000606499 FAM90A27PA6NNH2 459 aa6.78□□□□□ -1.32
MSH6-211ENST00000606499 E9PQ18 207 aa6.78□□□□□ -1.32
MSH6-211ENST00000606499 J3QKU1 62 aa6.78□□□□□ -1.32
MSH6-211ENST00000606499 XKRYO14609 159 aa6.78□□□□□ -1.32
MSH6-211ENST00000606499 DVL2O14641 736 aa6.78□□□□□ -1.32
MSH6-211ENST00000606499 SURF4O15260 269 aa6.78□□□□□ -1.32
MSH6-211ENST00000606499 IDH3BO43837 385 aa6.78□□□□□ -1.32
MSH6-211ENST00000606499 KRT33AO76009 404 aa6.78□□□□□ -1.32
MSH6-211ENST00000606499 IL18BPO95998 194 aa6.78□□□□□ -1.32
MSH6-211ENST00000606499 IGHG1P01857 330 aa6.78□□□□□ -1.32
MSH6-211ENST00000606499 RNF224P0DH78 156 aa6.78□□□□□ -1.32
MSH6-211ENST00000606499 CD8BP10966 210 aa6.78□□□□□ -1.32
MSH6-211ENST00000606499 VHLP40337 213 aa6.78□□□□□ -1.32
MSH6-211ENST00000606499 CSNK1A1P48729 337 aa6.78□□□□□ -1.32
MSH6-211ENST00000606499 FOXG1P55316 489 aaPredicted RBP6.78□□□□□ -1.32
MSH6-211ENST00000606499 RAP1BP61224 184 aa6.78□□□□□ -1.32
MSH6-211ENST00000606499 RAP1AP62834 184 aa6.78□□□□□ -1.32
MSH6-211ENST00000606499 KHDRBS1Q07666 443 aaKnown RBP eCLIP6.78□□□□□ -1.32
MSH6-211ENST00000606499 FAPQ12884 760 aa6.78□□□□□ -1.32
MSH6-211ENST00000606499 CRMP1Q14194 572 aa6.78□□□□□ -1.32
MSH6-211ENST00000606499 SNCBQ16143 134 aa6.78□□□□□ -1.32
MSH6-211ENST00000606499 HIST3H3Q16695 136 aa6.78□□□□□ -1.32
MSH6-211ENST00000606499 ZNF362Q5T0B9 420 aaPredicted RBP6.78□□□□□ -1.32
MSH6-211ENST00000606499 C9orf135Q5VTT2 229 aa6.78□□□□□ -1.32
MSH6-211ENST00000606499 FAM205BPQ63HN1 556 aa6.78□□□□□ -1.32
MSH6-211ENST00000606499 MTFR2Q6P444 385 aa6.78□□□□□ -1.32
MSH6-211ENST00000606499 LEG1Q6P5S2 330 aa6.78□□□□□ -1.32
MSH6-211ENST00000606499 HDDC2Q7Z4H3 204 aa6.78□□□□□ -1.32
MSH6-211ENST00000606499 ADCK1Q86TW2 530 aa6.78□□□□□ -1.32
MSH6-211ENST00000606499 JAZF1Q86VZ6 243 aa6.78□□□□□ -1.32
MSH6-211ENST00000606499 C20orf196Q8IYI0 205 aa6.78□□□□□ -1.32
MSH6-211ENST00000606499 GPR137CQ8N3F9 429 aa6.78□□□□□ -1.32
MSH6-211ENST00000606499 SLC37A3Q8NCC5 494 aa6.78□□□□□ -1.32
MSH6-211ENST00000606499 OR52E2Q8NGJ4 325 aa6.78□□□□□ -1.32
MSH6-211ENST00000606499 OR9Q1Q8NGQ5 310 aa6.78□□□□□ -1.32
MSH6-211ENST00000606499 OR6N1Q8NGY5 312 aa6.78□□□□□ -1.32
MSH6-211ENST00000606499 FAM81AQ8TBF8 368 aa6.78□□□□□ -1.32
MSH6-211ENST00000606499 CYGBQ8WWM9 190 aa6.78□□□□□ -1.32
MSH6-211ENST00000606499 HTRA1Q92743 480 aa6.78□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms