RNA–Protein interactions for RNA: ENST00000601341.5

VRK3-223, Transcript of vaccinia related kinase 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene VRK3, Length 1,777 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-223ENST00000601341 A6NL46 340 aa10.54□□□□□ -0.72
VRK3-223ENST00000601341 GNB5O14775 395 aa10.54□□□□□ -0.72
VRK3-223ENST00000601341 ARPC3O15145 178 aa10.54□□□□□ -0.72
VRK3-223ENST00000601341 TLX3O43711 291 aaPredicted RBP10.54□□□□□ -0.72
VRK3-223ENST00000601341 SLC43A1O75387 559 aa10.54□□□□□ -0.72
VRK3-223ENST00000601341 NDUFB2O95178 105 aa10.54□□□□□ -0.72
VRK3-223ENST00000601341 FAM157BP0CG42 384 aa10.54□□□□□ -0.72
VRK3-223ENST00000601341 CXCR1P25024 350 aa10.54□□□□□ -0.72
VRK3-223ENST00000601341 CD96P40200 585 aa10.54□□□□□ -0.72
VRK3-223ENST00000601341 KIR2DL3P43628 341 aa10.54□□□□□ -0.72
VRK3-223ENST00000601341 ZNF41P51814 821 aaPredicted RBP10.54□□□□□ -0.72
VRK3-223ENST00000601341 POLR2HP52434 150 aaKnown RBP10.54□□□□□ -0.72
VRK3-223ENST00000601341 HSF2Q03933 536 aa10.54□□□□□ -0.72
VRK3-223ENST00000601341 FHL1Q13642 323 aa10.54□□□□□ -0.72
VRK3-223ENST00000601341 CCDC58Q4VC31 144 aa10.54□□□□□ -0.72
VRK3-223ENST00000601341 TMEM53Q6P2H8 277 aa10.54□□□□□ -0.72
VRK3-223ENST00000601341 LINC00696Q6ZRV3 163 aa10.54□□□□□ -0.72
VRK3-223ENST00000601341 TCTE3Q8IZS6 198 aa10.54□□□□□ -0.72
VRK3-223ENST00000601341 TMEM99Q8N816 258 aa10.54□□□□□ -0.72
VRK3-223ENST00000601341 FADS6Q8N9I5 356 aa10.54□□□□□ -0.72
VRK3-223ENST00000601341 WDSUB1Q8N9V3 476 aa10.54□□□□□ -0.72
VRK3-223ENST00000601341 OR2M3Q8NG83 312 aa10.54□□□□□ -0.72
VRK3-223ENST00000601341 OR10H4Q8NGA5 316 aa10.54□□□□□ -0.72
VRK3-223ENST00000601341 ZNF524Q96C55 264 aa10.54□□□□□ -0.72
VRK3-223ENST00000601341 DCLRE1CQ96SD1 692 aaKnown RBP10.54□□□□□ -0.72
VRK3-223ENST00000601341 GPX7Q96SL4 187 aaPredicted RBP10.54□□□□□ -0.72
VRK3-223ENST00000601341 ENKD1Q9H0I2 346 aa10.54□□□□□ -0.72
VRK3-223ENST00000601341 ZCCHC4Q9H5U6 513 aa10.54□□□□□ -0.72
VRK3-223ENST00000601341 ISG20L2Q9H9L3 353 aaKnown RBP10.54□□□□□ -0.72
VRK3-223ENST00000601341 PROK2Q9HC23 129 aa10.54□□□□□ -0.72
VRK3-223ENST00000601341 MCCC2Q9HCC0 563 aa10.54□□□□□ -0.72
VRK3-223ENST00000601341 CHRNA9Q9UGM1 479 aa10.54□□□□□ -0.72
VRK3-223ENST00000601341 ARPC4-TTLL3A0A0A6YYG9 625 aa10.54□□□□□ -0.72
VRK3-223ENST00000601341 SHISA3A0PJX4 238 aa10.54□□□□□ -0.72
VRK3-223ENST00000601341 CD8B2A6NJW9 211 aa10.54□□□□□ -0.72
VRK3-223ENST00000601341 FAM47E-STBD1D6RA91 191 aa10.54□□□□□ -0.72
VRK3-223ENST00000601341 ETV2O00321 342 aaPredicted RBP10.54□□□□□ -0.72
VRK3-223ENST00000601341 OGG1O15527 345 aa10.54□□□□□ -0.72
VRK3-223ENST00000601341 LYRM1O43325 122 aa10.54□□□□□ -0.72
VRK3-223ENST00000601341 GATBO75879 557 aaKnown RBP10.54□□□□□ -0.72
VRK3-223ENST00000601341 WDPCPO95876 746 aa10.54□□□□□ -0.72
VRK3-223ENST00000601341 GSTT2P0CG29 244 aa10.54□□□□□ -0.72
VRK3-223ENST00000601341 GSTT2BP0CG30 244 aa10.54□□□□□ -0.72
VRK3-223ENST00000601341 CD8BP10966 210 aa10.54□□□□□ -0.72
VRK3-223ENST00000601341 PRKCAP17252 672 aa10.54□□□□□ -0.72
VRK3-223ENST00000601341 NPR2P20594 1047 aa10.54□□□□□ -0.72
VRK3-223ENST00000601341 PTNP21246 168 aa10.54□□□□□ -0.72
VRK3-223ENST00000601341 APEX1P27695 318 aaKnown RBP10.54□□□□□ -0.72
VRK3-223ENST00000601341 NOS3P29474 1203 aa10.54□□□□□ -0.72
VRK3-223ENST00000601341 DLX5P56178 289 aa10.54□□□□□ -0.72
VRK3-223ENST00000601341 CLDN20P56880 219 aa10.54□□□□□ -0.72
VRK3-223ENST00000601341 RAB25P57735 213 aa10.54□□□□□ -0.72
VRK3-223ENST00000601341 BTG1P62324 171 aa10.54□□□□□ -0.72
VRK3-223ENST00000601341 CRYZQ08257 329 aaKnown RBP10.54□□□□□ -0.72
VRK3-223ENST00000601341 IL18Q14116 193 aa10.54□□□□□ -0.72
VRK3-223ENST00000601341 INPP5JQ15735 1006 aaPredicted RBP10.54□□□□□ -0.72
VRK3-223ENST00000601341 CARTPTQ16568 116 aa10.54□□□□□ -0.72
VRK3-223ENST00000601341 BAIAP2L2Q6UXY1 529 aa10.54□□□□□ -0.72
VRK3-223ENST00000601341 DPY19L2P2Q6ZN68 376 aa10.54□□□□□ -0.72
VRK3-223ENST00000601341 CDH24Q86UP0 819 aa10.54□□□□□ -0.72
VRK3-223ENST00000601341 ZNF227Q86WZ6 799 aa10.54□□□□□ -0.72
VRK3-223ENST00000601341 LIPHQ8WWY8 451 aa10.54□□□□□ -0.72
VRK3-223ENST00000601341 CREB3L1Q96BA8 519 aa10.54□□□□□ -0.72
VRK3-223ENST00000601341 TMEM41AQ96HV5 264 aa10.54□□□□□ -0.72
VRK3-223ENST00000601341 HCAR1Q9BXC0 346 aa10.54□□□□□ -0.72
VRK3-223ENST00000601341 EXPH5Q8NEV8 1989 aa10.54□□□□□ -0.72
VRK3-223ENST00000601341 TNFSF12-TNFSF13A0A0A6YY99 330 aa10.53□□□□□ -0.72
VRK3-223ENST00000601341 EFSO43281 561 aa10.53□□□□□ -0.72
VRK3-223ENST00000601341 ARL6IP5O75915 188 aa10.53□□□□□ -0.72
VRK3-223ENST00000601341 NEURL1O76050 574 aa10.53□□□□□ -0.72
VRK3-223ENST00000601341 YES1P07947 543 aa10.53□□□□□ -0.72
VRK3-223ENST00000601341 APEHP13798 732 aaKnown RBP10.53□□□□□ -0.72
VRK3-223ENST00000601341 CNR1P21554 472 aa10.53□□□□□ -0.72
VRK3-223ENST00000601341 APOBEC1P41238 236 aaKnown RBP10.53□□□□□ -0.72
VRK3-223ENST00000601341 NR4A2P43354 598 aa10.53□□□□□ -0.72
VRK3-223ENST00000601341 CCL11P51671 97 aa10.53□□□□□ -0.72
VRK3-223ENST00000601341 PRPS1P60891 318 aa10.53□□□□□ -0.72
VRK3-223ENST00000601341 IFITM2Q01629 132 aa10.53□□□□□ -0.72
VRK3-223ENST00000601341 CRMP1Q14194 572 aa10.53□□□□□ -0.72
VRK3-223ENST00000601341 OR1C1Q15619 314 aa10.53□□□□□ -0.72
VRK3-223ENST00000601341 DEFB109BQ30KR1 87 aa10.53□□□□□ -0.72
VRK3-223ENST00000601341 TBRG1Q3YBR2 411 aa10.53□□□□□ -0.72
VRK3-223ENST00000601341 KLHL12Q53G59 568 aa10.53□□□□□ -0.72
VRK3-223ENST00000601341 CCDC92Q53HC0 331 aaPredicted RBP10.53□□□□□ -0.72
VRK3-223ENST00000601341 SLC25A53Q5H9E4 307 aa10.53□□□□□ -0.72
VRK3-223ENST00000601341 SPINK14Q6IE38 97 aa10.53□□□□□ -0.72
VRK3-223ENST00000601341 ARSKQ6UWY0 536 aa10.53□□□□□ -0.72
VRK3-223ENST00000601341 OR1J4Q8NGS1 313 aa10.53□□□□□ -0.72
VRK3-223ENST00000601341 ABHD4Q8TB40 342 aa10.53□□□□□ -0.72
VRK3-223ENST00000601341 SMPDL3BQ92485 455 aa10.53□□□□□ -0.72
VRK3-223ENST00000601341 MRGPRX4Q96LA9 322 aa10.53□□□□□ -0.72
VRK3-223ENST00000601341 PGLYRP3Q96LB9 341 aa10.53□□□□□ -0.72
VRK3-223ENST00000601341 ABRACLQ9P1F3 81 aa10.53□□□□□ -0.72
VRK3-223ENST00000601341 DKK4Q9UBT3 224 aa10.53□□□□□ -0.72
VRK3-223ENST00000601341 FBXL2Q9UKC9 423 aa10.53□□□□□ -0.72
VRK3-223ENST00000601341 ZMIZ1Q9ULJ6 1067 aa10.53□□□□□ -0.72
VRK3-223ENST00000601341 VDAC3Q9Y277 283 aa10.53□□□□□ -0.72
VRK3-223ENST00000601341 SIRT4Q9Y6E7 314 aaPredicted RBP10.53□□□□□ -0.72
VRK3-223ENST00000601341 ASPMQ8IZT6 3477 aa10.53□□□□□ -0.72
VRK3-223ENST00000601341 HEATR5AQ86XA9 2040 aa10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms