RNA–Protein interactions for RNA: ENST00000601253.5

SNRPA-209, Transcript of small nuclear ribonucleoprotein polypeptide A, humanhuman

TSL 3

Gene SNRPA, Length 519 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA-209ENST00000601253 RPL27P61353 136 aaKnown RBP12.12□□□□□ -0.47
SNRPA-209ENST00000601253 RAP1AP62834 184 aa12.12□□□□□ -0.47
SNRPA-209ENST00000601253 HIST3H3Q16695 136 aa12.12□□□□□ -0.47
SNRPA-209ENST00000601253 CEACAM16Q2WEN9 425 aa12.12□□□□□ -0.47
SNRPA-209ENST00000601253 PHYHD1Q5SRE7 291 aa12.12□□□□□ -0.47
SNRPA-209ENST00000601253 PGBD2Q6P3X8 592 aa12.12□□□□□ -0.47
SNRPA-209ENST00000601253 KLHL24Q6TFL4 600 aa12.12□□□□□ -0.47
SNRPA-209ENST00000601253 WDFY1Q8IWB7 410 aa12.12□□□□□ -0.47
SNRPA-209ENST00000601253 FNDC8Q8TC99 324 aa12.12□□□□□ -0.47
SNRPA-209ENST00000601253 GNPDA2Q8TDQ7 276 aa12.12□□□□□ -0.47
SNRPA-209ENST00000601253 BCL2L2Q92843 193 aaPredicted RBP12.12□□□□□ -0.47
SNRPA-209ENST00000601253 GPX7Q96SL4 187 aaPredicted RBP12.12□□□□□ -0.47
SNRPA-209ENST00000601253 POLDIP3Q9BY77 421 aaKnown RBP12.12□□□□□ -0.47
SNRPA-209ENST00000601253 MRPL13Q9BYD1 178 aaKnown RBP12.12□□□□□ -0.47
SNRPA-209ENST00000601253 SLC25A15Q9Y619 301 aa12.12□□□□□ -0.47
SNRPA-209ENST00000601253 ABCA12Q86UK0 2595 aa12.12□□□□□ -0.47
SNRPA-209ENST00000601253 ITPR2Q14571 2701 aa12.11□□□□□ -0.47
SNRPA-209ENST00000601253 DCHS2Q6V1P9 2916 aa12.11□□□□□ -0.47
SNRPA-209ENST00000601253 ARPC4-TTLL3A0A0A6YYG9 625 aa12.11□□□□□ -0.47
SNRPA-209ENST00000601253 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP12.11□□□□□ -0.47
SNRPA-209ENST00000601253 ARRDC5A6NEK1 342 aa12.11□□□□□ -0.47
SNRPA-209ENST00000601253 ENTPD5O75356 428 aa12.11□□□□□ -0.47
SNRPA-209ENST00000601253 TRMUO75648 421 aaKnown RBP12.11□□□□□ -0.47
SNRPA-209ENST00000601253 WNT11O96014 354 aa12.11□□□□□ -0.47
SNRPA-209ENST00000601253 ACADSP16219 412 aa12.11□□□□□ -0.47
SNRPA-209ENST00000601253 ARF1P84077 181 aaKnown RBP12.11□□□□□ -0.47
SNRPA-209ENST00000601253 TSPAN31Q12999 210 aa12.11□□□□□ -0.47
SNRPA-209ENST00000601253 MICAQ29983 383 aa12.11□□□□□ -0.47
SNRPA-209ENST00000601253 TBRG1Q3YBR2 411 aa12.11□□□□□ -0.47
SNRPA-209ENST00000601253 ZNF770Q6IQ21 691 aaPredicted RBP12.11□□□□□ -0.47
SNRPA-209ENST00000601253 SMARCD3Q6STE5 483 aa12.11□□□□□ -0.47
SNRPA-209ENST00000601253 SEZ6L2Q6UXD5 910 aa12.11□□□□□ -0.47
SNRPA-209ENST00000601253 DPY19L2P2Q6ZN68 376 aa12.11□□□□□ -0.47
SNRPA-209ENST00000601253 ZNF627Q7L945 461 aa12.11□□□□□ -0.47
SNRPA-209ENST00000601253 YTHDF3Q7Z739 585 aaKnown RBP12.11□□□□□ -0.47
SNRPA-209ENST00000601253 IGFN1Q86VF2 1251 aa12.11□□□□□ -0.47
SNRPA-209ENST00000601253 CCDC36Q8IYA8 594 aa12.11□□□□□ -0.47
SNRPA-209ENST00000601253 ARIH2OSQ8N7S6 290 aa12.11□□□□□ -0.47
SNRPA-209ENST00000601253 WDR31Q8NA23 367 aa12.11□□□□□ -0.47
SNRPA-209ENST00000601253 NOXO1Q8NFA2 376 aa12.11□□□□□ -0.47
SNRPA-209ENST00000601253 ZNF519Q8TB69 540 aa12.11□□□□□ -0.47
SNRPA-209ENST00000601253 FANK1Q8TC84 345 aa12.11□□□□□ -0.47
SNRPA-209ENST00000601253 PIK3IP1Q96FE7 263 aa12.11□□□□□ -0.47
SNRPA-209ENST00000601253 GPA33Q99795 319 aa12.11□□□□□ -0.47
SNRPA-209ENST00000601253 ALG12Q9BV10 488 aa12.11□□□□□ -0.47
SNRPA-209ENST00000601253 KATNB1Q9BVA0 655 aa12.11□□□□□ -0.47
SNRPA-209ENST00000601253 ESRP2Q9H6T0 727 aaKnown RBP12.11□□□□□ -0.47
SNRPA-209ENST00000601253 SMURF2Q9HAU4 748 aa12.11□□□□□ -0.47
SNRPA-209ENST00000601253 NRIP3Q9NQ35 241 aa12.11□□□□□ -0.47
SNRPA-209ENST00000601253 VNN3Q9NY84 501 aa12.11□□□□□ -0.47
SNRPA-209ENST00000601253 GRHPRQ9UBQ7 328 aa12.11□□□□□ -0.47
SNRPA-209ENST00000601253 DNAJB9Q9UBS3 223 aa12.11□□□□□ -0.47
SNRPA-209ENST00000601253 POFUT2Q9Y2G5 429 aa12.11□□□□□ -0.47
SNRPA-209ENST00000601253 FBN2P35556 2912 aa12.1□□□□□ -0.47
SNRPA-209ENST00000601253 APCP25054 2843 aa12.1□□□□□ -0.47
SNRPA-209ENST00000601253 GNGT2O14610 69 aa12.1□□□□□ -0.47
SNRPA-209ENST00000601253 SIAH2O43255 324 aa12.1□□□□□ -0.47
SNRPA-209ENST00000601253 AHCYL1O43865 530 aa12.1□□□□□ -0.47
SNRPA-209ENST00000601253 APEHP13798 732 aaKnown RBP12.1□□□□□ -0.47
SNRPA-209ENST00000601253 ZNF26P17031 533 aaPredicted RBP12.1□□□□□ -0.47
SNRPA-209ENST00000601253 ACVR1BP36896 505 aa12.1□□□□□ -0.47
SNRPA-209ENST00000601253 ZNF133P52736 654 aaPredicted RBP12.1□□□□□ -0.47
SNRPA-209ENST00000601253 UBE2NP61088 152 aaKnown RBP12.1□□□□□ -0.47
SNRPA-209ENST00000601253 RUNX1T1Q06455 604 aa12.1□□□□□ -0.47
SNRPA-209ENST00000601253 TOP3AQ13472 1001 aaPredicted RBP12.1□□□□□ -0.47
SNRPA-209ENST00000601253 HIKESHIQ53FT3 197 aa12.1□□□□□ -0.47
SNRPA-209ENST00000601253 GPR139Q6DWJ6 353 aa12.1□□□□□ -0.47
SNRPA-209ENST00000601253 ALKBH2Q6NS38 261 aa12.1□□□□□ -0.47
SNRPA-209ENST00000601253 RPL13AP3Q6NVV1 102 aa12.1□□□□□ -0.47
SNRPA-209ENST00000601253 LRFN4Q6PJG9 635 aa12.1□□□□□ -0.47
SNRPA-209ENST00000601253 KLHL17Q6TDP4 642 aa12.1□□□□□ -0.47
SNRPA-209ENST00000601253 OR52N5Q8NH56 324 aa12.1□□□□□ -0.47
SNRPA-209ENST00000601253 UTP4Q969X6 686 aaKnown RBP12.1□□□□□ -0.47
SNRPA-209ENST00000601253 SLCO4A1Q96BD0 722 aa12.1□□□□□ -0.47
SNRPA-209ENST00000601253 ZNF837Q96EG3 531 aaPredicted RBP12.1□□□□□ -0.47
SNRPA-209ENST00000601253 DUS3LQ96G46 650 aaKnown RBP12.1□□□□□ -0.47
SNRPA-209ENST00000601253 PLPPR2Q96GM1 343 aa12.1□□□□□ -0.47
SNRPA-209ENST00000601253 LURAP1Q96LR2 239 aa12.1□□□□□ -0.47
SNRPA-209ENST00000601253 TSPAN32Q96QS1 320 aa12.1□□□□□ -0.47
SNRPA-209ENST00000601253 KCNK17Q96T54 332 aa12.1□□□□□ -0.47
SNRPA-209ENST00000601253 ARMC1Q9NVT9 282 aa12.1□□□□□ -0.47
SNRPA-209ENST00000601253 ZNF346Q9UL40 294 aaKnown RBP12.1□□□□□ -0.47
SNRPA-209ENST00000601253 MGAT4BQ9UQ53 548 aa12.1□□□□□ -0.47
SNRPA-209ENST00000601253 U3KQV3 271 aa12.1□□□□□ -0.47
SNRPA-209ENST00000601253 NOTCH2Q04721 2471 aa12.1□□□□□ -0.47
SNRPA-209ENST00000601253 XKRYO14609 159 aa12.09□□□□□ -0.47
SNRPA-209ENST00000601253 DHHO43323 396 aa12.09□□□□□ -0.47
SNRPA-209ENST00000601253 MGRN1O60291 552 aa12.09□□□□□ -0.47
SNRPA-209ENST00000601253 DEAF1O75398 565 aaPredicted RBP12.09□□□□□ -0.47
SNRPA-209ENST00000601253 TXNDC12O95881 172 aa12.09□□□□□ -0.47
SNRPA-209ENST00000601253 QDPRP09417 244 aa12.09□□□□□ -0.47
SNRPA-209ENST00000601253 GSTM3P21266 225 aa12.09□□□□□ -0.47
SNRPA-209ENST00000601253 LOXP28300 417 aaPredicted RBP12.09□□□□□ -0.47
SNRPA-209ENST00000601253 SDHAP31040 664 aa12.09□□□□□ -0.47
SNRPA-209ENST00000601253 SLC6A6P31641 620 aa12.09□□□□□ -0.47
SNRPA-209ENST00000601253 RPS6KA3P51812 740 aa12.09□□□□□ -0.47
SNRPA-209ENST00000601253 FXYD6P3P58550 94 aa12.09□□□□□ -0.47
SNRPA-209ENST00000601253 ERVK-25P63136 954 aa12.09□□□□□ -0.47
SNRPA-209ENST00000601253 CCNIQ14094 377 aa12.09□□□□□ -0.47
SNRPA-209ENST00000601253 RFX4Q33E94 735 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms