RNA–Protein interactions for RNA: ENST00000600970.5

USE1-208, Transcript of unconventional SNARE in the ER 1, humanhuman

TSL 5

Gene USE1, Length 826 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-208ENST00000600970 PNPOQ9NVS9 261 aa14.27□□□□□ -0.13
USE1-208ENST00000600970 HAO1Q9UJM8 370 aa14.27□□□□□ -0.13
USE1-208ENST00000600970 CACNG2Q9Y698 323 aa14.27□□□□□ -0.13
USE1-208ENST00000600970 ARHGAP32A7KAX9 2087 aa14.26□□□□□ -0.13
USE1-208ENST00000600970 SLC22A23A1A5C7 686 aa14.26□□□□□ -0.13
USE1-208ENST00000600970 TMEM247A6NEH6 219 aa14.26□□□□□ -0.13
USE1-208ENST00000600970 ZNF726A6NNF4 738 aa14.26□□□□□ -0.13
USE1-208ENST00000600970 SDHDO14521 159 aa14.26□□□□□ -0.13
USE1-208ENST00000600970 ZNF500O60304 480 aaPredicted RBP14.26□□□□□ -0.13
USE1-208ENST00000600970 ANP32DO95626 131 aa14.26□□□□□ -0.13
USE1-208ENST00000600970 BGLAPP02818 100 aa14.26□□□□□ -0.13
USE1-208ENST00000600970 ZCCHC18P0CG32 403 aa14.26□□□□□ -0.13
USE1-208ENST00000600970 ERVS71-1P61550 626 aa14.26□□□□□ -0.13
USE1-208ENST00000600970 IFFO1Q0D2I5 559 aa14.26□□□□□ -0.13
USE1-208ENST00000600970 ALG10BQ5I7T1 473 aa14.26□□□□□ -0.13
USE1-208ENST00000600970 USP51Q70EK9 711 aa14.26□□□□□ -0.13
USE1-208ENST00000600970 PIWIL3Q7Z3Z3 882 aaKnown RBP14.26□□□□□ -0.13
USE1-208ENST00000600970 MIER2Q8N344 545 aa14.26□□□□□ -0.13
USE1-208ENST00000600970 LRRC17Q8N6Y2 441 aa14.26□□□□□ -0.13
USE1-208ENST00000600970 SIGLECL1Q8N7X8 197 aa14.26□□□□□ -0.13
USE1-208ENST00000600970 SCAIQ8N9R8 606 aa14.26□□□□□ -0.13
USE1-208ENST00000600970 SLC30A7Q8NEW0 376 aa14.26□□□□□ -0.13
USE1-208ENST00000600970 OR6S1Q8NH40 331 aa14.26□□□□□ -0.13
USE1-208ENST00000600970 GTF3AQ92664 365 aaKnown RBP14.26□□□□□ -0.13
USE1-208ENST00000600970 LRRC58Q96CX6 371 aa14.26□□□□□ -0.13
USE1-208ENST00000600970 ROPN1BQ9BZX4 212 aaPredicted RBP14.26□□□□□ -0.13
USE1-208ENST00000600970 OR51B6Q9H340 312 aa14.26□□□□□ -0.13
USE1-208ENST00000600970 UNKLQ9H9P5 680 aaKnown RBP14.26□□□□□ -0.13
USE1-208ENST00000600970 ROPN1Q9HAT0 212 aaPredicted RBP14.26□□□□□ -0.13
USE1-208ENST00000600970 BCL2L10Q9HD36 194 aa14.26□□□□□ -0.13
USE1-208ENST00000600970 THUMPD1Q9NXG2 353 aaKnown RBP14.26□□□□□ -0.13
USE1-208ENST00000600970 SLCO1C1Q9NYB5 712 aa14.26□□□□□ -0.13
USE1-208ENST00000600970 BIRC5O15392 142 aa14.25□□□□□ -0.13
USE1-208ENST00000600970 TPD52L2O43399 206 aaKnown RBP14.25□□□□□ -0.13
USE1-208ENST00000600970 IL6P05231 212 aa14.25□□□□□ -0.13
USE1-208ENST00000600970 NUDT7P0C024 238 aa14.25□□□□□ -0.13
USE1-208ENST00000600970 CCL2P13500 99 aa14.25□□□□□ -0.13
USE1-208ENST00000600970 PRTN3P24158 256 aa14.25□□□□□ -0.13
USE1-208ENST00000600970 LCN2P80188 198 aa14.25□□□□□ -0.13
USE1-208ENST00000600970 PUDPQ08623 228 aa14.25□□□□□ -0.13
USE1-208ENST00000600970 RBBP4Q09028 425 aa14.25□□□□□ -0.13
USE1-208ENST00000600970 PMS2P3Q13401 168 aa14.25□□□□□ -0.13
USE1-208ENST00000600970 PDCD4Q53EL6 469 aaKnown RBP14.25□□□□□ -0.13
USE1-208ENST00000600970 RBMS3Q6XE24 437 aaKnown RBP14.25□□□□□ -0.13
USE1-208ENST00000600970 WDR88Q6ZMY6 472 aa14.25□□□□□ -0.13
USE1-208ENST00000600970 KIRREL3Q8IZU9 778 aa14.25□□□□□ -0.13
USE1-208ENST00000600970 GLB1L3Q8NCI6 653 aaPredicted RBP14.25□□□□□ -0.13
USE1-208ENST00000600970 ZNF519Q8TB69 540 aa14.25□□□□□ -0.13
USE1-208ENST00000600970 DNAJA4Q8WW22 397 aaPredicted RBP14.25□□□□□ -0.13
USE1-208ENST00000600970 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP14.25□□□□□ -0.13
USE1-208ENST00000600970 RAB1CQ92928 201 aa14.25□□□□□ -0.13
USE1-208ENST00000600970 VPS33AQ96AX1 596 aa14.25□□□□□ -0.13
USE1-208ENST00000600970 MOGAT1Q96PD6 335 aa14.25□□□□□ -0.13
USE1-208ENST00000600970 DUX5Q96PT3 197 aa14.25□□□□□ -0.13
USE1-208ENST00000600970 ASPNQ9BXN1 380 aa14.25□□□□□ -0.13
USE1-208ENST00000600970 DECR2Q9NUI1 292 aa14.25□□□□□ -0.13
USE1-208ENST00000600970 MRPL39Q9NYK5 338 aaKnown RBP14.25□□□□□ -0.13
USE1-208ENST00000600970 DNAJC9-AS1A6NH13 148 aa14.24□□□□□ -0.13
USE1-208ENST00000600970 LRRN3E7EW58 273 aa14.24□□□□□ -0.13
USE1-208ENST00000600970 LCKP06239 509 aa14.24□□□□□ -0.13
USE1-208ENST00000600970 AHCYP23526 432 aa14.24□□□□□ -0.13
USE1-208ENST00000600970 CSNK1A1P48729 337 aa14.24□□□□□ -0.13
USE1-208ENST00000600970 TSTQ16762 297 aaKnown RBP14.24□□□□□ -0.13
USE1-208ENST00000600970 HFEQ30201 348 aa14.24□□□□□ -0.13
USE1-208ENST00000600970 MIDNQ504T8 468 aa14.24□□□□□ -0.13
USE1-208ENST00000600970 FAM91A1Q658Y4 838 aa14.24□□□□□ -0.13
USE1-208ENST00000600970 ULK3Q6PHR2 472 aa14.24□□□□□ -0.13
USE1-208ENST00000600970 ZNF771Q7L3S4 317 aaPredicted RBP14.24□□□□□ -0.13
USE1-208ENST00000600970 DOK3Q7L591 496 aa14.24□□□□□ -0.13
USE1-208ENST00000600970 PXKQ7Z7A4 578 aa14.24□□□□□ -0.13
USE1-208ENST00000600970 RETREG3Q86VR2 466 aa14.24□□□□□ -0.13
USE1-208ENST00000600970 COMTD1Q86VU5 262 aa14.24□□□□□ -0.13
USE1-208ENST00000600970 SLC22A24Q8N4F4 322 aa14.24□□□□□ -0.13
USE1-208ENST00000600970 BBS10Q8TAM1 723 aa14.24□□□□□ -0.13
USE1-208ENST00000600970 C11orf40Q8WZ69 217 aa14.24□□□□□ -0.13
USE1-208ENST00000600970 TMEM54Q969K7 222 aa14.24□□□□□ -0.13
USE1-208ENST00000600970 MAL2Q969L2 176 aa14.24□□□□□ -0.13
USE1-208ENST00000600970 SLC47A1Q96FL8 570 aa14.24□□□□□ -0.13
USE1-208ENST00000600970 TIMD4Q96H15 378 aa14.24□□□□□ -0.13
USE1-208ENST00000600970 EPYCQ99645 322 aa14.24□□□□□ -0.13
USE1-208ENST00000600970 SH3GL3Q99963 347 aa14.24□□□□□ -0.13
USE1-208ENST00000600970 GAL3ST1Q99999 423 aa14.24□□□□□ -0.13
USE1-208ENST00000600970 CDH20Q9HBT6 801 aa14.24□□□□□ -0.13
USE1-208ENST00000600970 A0A0G2JK05 382 aa14.23□□□□□ -0.13
USE1-208ENST00000600970 PLPP3O14495 311 aa14.23□□□□□ -0.13
USE1-208ENST00000600970 SERPINI2O75830 405 aa14.23□□□□□ -0.13
USE1-208ENST00000600970 OR8G3PP0DMU2 310 aa14.23□□□□□ -0.13
USE1-208ENST00000600970 BGNP21810 368 aa14.23□□□□□ -0.13
USE1-208ENST00000600970 PRKAR1BP31321 381 aa14.23□□□□□ -0.13
USE1-208ENST00000600970 UCP2P55851 309 aa14.23□□□□□ -0.13
USE1-208ENST00000600970 BIDP55957 195 aa14.23□□□□□ -0.13
USE1-208ENST00000600970 RGNQ15493 299 aa14.23□□□□□ -0.13
USE1-208ENST00000600970 TREML1Q86YW5 311 aa14.23□□□□□ -0.13
USE1-208ENST00000600970 C1orf147Q96MC9 270 aaPredicted RBP14.23□□□□□ -0.13
USE1-208ENST00000600970 WDR55Q9H6Y2 383 aaPredicted RBP14.23□□□□□ -0.13
USE1-208ENST00000600970 SAP30LQ9HAJ7 183 aa14.23□□□□□ -0.13
USE1-208ENST00000600970 A4GALTQ9NPC4 353 aa14.23□□□□□ -0.13
USE1-208ENST00000600970 TCF7L2Q9NQB0 619 aa14.23□□□□□ -0.13
USE1-208ENST00000600970 GLTPQ9NZD2 209 aa14.23□□□□□ -0.13
USE1-208ENST00000600970 TANC2Q9HCD6 1990 aa14.23□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms