RNA–Protein interactions for RNA: ENST00000596348.2

SCN1B-204, Transcript of sodium voltage-gated channel beta subunit 1, humanhuman

TSL 5 BASIC

Gene SCN1B, Length 1,176 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1B-204ENST00000596348 PTP4A3O75365 173 aa13.1□□□□□ -0.31
SCN1B-204ENST00000596348 IGHMP01871 453 aa13.1□□□□□ -0.31
SCN1B-204ENST00000596348 DAP3P51398 398 aaKnown RBP13.1□□□□□ -0.31
SCN1B-204ENST00000596348 FXYD6P3P58550 94 aa13.1□□□□□ -0.31
SCN1B-204ENST00000596348 CTXN1P60606 82 aa13.1□□□□□ -0.31
SCN1B-204ENST00000596348 TUBA1BP68363 451 aa13.1□□□□□ -0.31
SCN1B-204ENST00000596348 TUBA4AP68366 448 aa13.1□□□□□ -0.31
SCN1B-204ENST00000596348 CHRNB3Q05901 458 aa13.1□□□□□ -0.31
SCN1B-204ENST00000596348 TOP3AQ13472 1001 aaPredicted RBP13.1□□□□□ -0.31
SCN1B-204ENST00000596348 FLOT2Q14254 428 aa13.1□□□□□ -0.31
SCN1B-204ENST00000596348 HIST3H3Q16695 136 aa13.1□□□□□ -0.31
SCN1B-204ENST00000596348 ANKDD1AQ495B1 522 aa13.1□□□□□ -0.31
SCN1B-204ENST00000596348 ZBED5Q49AG3 693 aa13.1□□□□□ -0.31
SCN1B-204ENST00000596348 FAM98BQ52LJ0 330 aaKnown RBP13.1□□□□□ -0.31
SCN1B-204ENST00000596348 PAMR1Q6UXH9 720 aa13.1□□□□□ -0.31
SCN1B-204ENST00000596348 ZNF704Q6ZNC4 412 aaPredicted RBP13.1□□□□□ -0.31
SCN1B-204ENST00000596348 TUBA1AQ71U36 451 aa13.1□□□□□ -0.31
SCN1B-204ENST00000596348 SSX8Q7RTT4 187 aa13.1□□□□□ -0.31
SCN1B-204ENST00000596348 ZER1Q7Z7L7 766 aa13.1□□□□□ -0.31
SCN1B-204ENST00000596348 AQP12AQ8IXF9 295 aa13.1□□□□□ -0.31
SCN1B-204ENST00000596348 NOXO1Q8NFA2 376 aa13.1□□□□□ -0.31
SCN1B-204ENST00000596348 OR4C15Q8NGM1 316 aa13.1□□□□□ -0.31
SCN1B-204ENST00000596348 MAGEE2Q8TD90 523 aaPredicted RBP13.1□□□□□ -0.31
SCN1B-204ENST00000596348 CANT1Q8WVQ1 401 aa13.1□□□□□ -0.31
SCN1B-204ENST00000596348 ALPK1Q96QP1 1244 aa13.1□□□□□ -0.31
SCN1B-204ENST00000596348 TRIM15Q9C019 465 aa13.1□□□□□ -0.31
SCN1B-204ENST00000596348 TXNIPQ9H3M7 391 aa13.1□□□□□ -0.31
SCN1B-204ENST00000596348 ESRP2Q9H6T0 727 aaKnown RBP13.1□□□□□ -0.31
SCN1B-204ENST00000596348 NGBQ9NPG2 151 aa13.1□□□□□ -0.31
SCN1B-204ENST00000596348 B3GAT2Q9NPZ5 323 aa13.1□□□□□ -0.31
SCN1B-204ENST00000596348 ST6GALNAC2Q9UJ37 374 aa13.1□□□□□ -0.31
SCN1B-204ENST00000596348 SIGLEC7Q9Y286 467 aa13.1□□□□□ -0.31
SCN1B-204ENST00000596348 PLEKHA6Q9Y2H5 1048 aa13.1□□□□□ -0.31
SCN1B-204ENST00000596348 AMDHD2Q9Y303 409 aa13.1□□□□□ -0.31
SCN1B-204ENST00000596348 PRRC2AP48634 2157 aaKnown RBP13.1□□□□□ -0.31
SCN1B-204ENST00000596348 ARPC4-TTLL3A0A0A6YYG9 625 aa13.09□□□□□ -0.31
SCN1B-204ENST00000596348 TRMUO75648 421 aaKnown RBP13.09□□□□□ -0.31
SCN1B-204ENST00000596348 ATP5HO75947 161 aa13.09□□□□□ -0.31
SCN1B-204ENST00000596348 IGHG1P01857 330 aa13.09□□□□□ -0.31
SCN1B-204ENST00000596348 RAP2AP10114 183 aa13.09□□□□□ -0.31
SCN1B-204ENST00000596348 ACADSP16219 412 aa13.09□□□□□ -0.31
SCN1B-204ENST00000596348 HOXC12P31275 282 aa13.09□□□□□ -0.31
SCN1B-204ENST00000596348 ERFP50548 548 aa13.09□□□□□ -0.31
SCN1B-204ENST00000596348 HMGA2P52926 109 aa13.09□□□□□ -0.31
SCN1B-204ENST00000596348 PRPS1P60891 318 aa13.09□□□□□ -0.31
SCN1B-204ENST00000596348 RPL27P61353 136 aaKnown RBP13.09□□□□□ -0.31
SCN1B-204ENST00000596348 SPOCK1Q08629 439 aa13.09□□□□□ -0.31
SCN1B-204ENST00000596348 PPP1R8Q12972 351 aaKnown RBP13.09□□□□□ -0.31
SCN1B-204ENST00000596348 KLHL24Q6TFL4 600 aa13.09□□□□□ -0.31
SCN1B-204ENST00000596348 THSD4Q6ZMP0 1018 aa13.09□□□□□ -0.31
SCN1B-204ENST00000596348 ZNF627Q7L945 461 aa13.09□□□□□ -0.31
SCN1B-204ENST00000596348 SYT14Q8NB59 555 aa13.09□□□□□ -0.31
SCN1B-204ENST00000596348 LILRB1Q8NHL6 650 aaPredicted RBP13.09□□□□□ -0.31
SCN1B-204ENST00000596348 ZNF519Q8TB69 540 aa13.09□□□□□ -0.31
SCN1B-204ENST00000596348 HDAC2Q92769 488 aaKnown RBP13.09□□□□□ -0.31
SCN1B-204ENST00000596348 NEUROG1Q92886 237 aa13.09□□□□□ -0.31
SCN1B-204ENST00000596348 NMD3Q96D46 503 aaKnown RBP13.09□□□□□ -0.31
SCN1B-204ENST00000596348 RSRC1Q96IZ7 334 aaKnown RBP13.09□□□□□ -0.31
SCN1B-204ENST00000596348 TSPAN32Q96QS1 320 aa13.09□□□□□ -0.31
SCN1B-204ENST00000596348 KATNB1Q9BVA0 655 aa13.09□□□□□ -0.31
SCN1B-204ENST00000596348 LRMDAQ9H2I8 198 aa13.09□□□□□ -0.31
SCN1B-204ENST00000596348 UBTD1Q9HAC8 227 aa13.09□□□□□ -0.31
SCN1B-204ENST00000596348 ZNF346Q9UL40 294 aaKnown RBP13.09□□□□□ -0.31
SCN1B-204ENST00000596348 ADAM18Q9Y3Q7 739 aa13.09□□□□□ -0.31
SCN1B-204ENST00000596348 RNF115Q9Y4L5 304 aa13.09□□□□□ -0.31
SCN1B-204ENST00000596348 F8P00451 2351 aa13.08□□□□□ -0.32
SCN1B-204ENST00000596348 TEP1Q99973 2627 aaKnown RBP13.08□□□□□ -0.32
SCN1B-204ENST00000596348 TCRBV3S1A0A5B6 114 aa13.08□□□□□ -0.32
SCN1B-204ENST00000596348 DHRS12A0PJE2 317 aa13.08□□□□□ -0.32
SCN1B-204ENST00000596348 UNC119BA6NIH7 251 aa13.08□□□□□ -0.32
SCN1B-204ENST00000596348 M0R1B8 84 aa13.08□□□□□ -0.32
SCN1B-204ENST00000596348 TNFRSF11BO00300 401 aa13.08□□□□□ -0.32
SCN1B-204ENST00000596348 OR10H3O60404 316 aa13.08□□□□□ -0.32
SCN1B-204ENST00000596348 KRT36O76013 467 aa13.08□□□□□ -0.32
SCN1B-204ENST00000596348 STAMBPO95630 424 aa13.08□□□□□ -0.32
SCN1B-204ENST00000596348 CD3EP07766 207 aa13.08□□□□□ -0.32
SCN1B-204ENST00000596348 QDPRP09417 244 aa13.08□□□□□ -0.32
SCN1B-204ENST00000596348 B4GALT1P15291 398 aa13.08□□□□□ -0.32
SCN1B-204ENST00000596348 RASSF2P50749 326 aa13.08□□□□□ -0.32
SCN1B-204ENST00000596348 CLRN1P58418 232 aa13.08□□□□□ -0.32
SCN1B-204ENST00000596348 ERVK-25P63136 954 aa13.08□□□□□ -0.32
SCN1B-204ENST00000596348 MYBPC1Q00872 1141 aa13.08□□□□□ -0.32
SCN1B-204ENST00000596348 TAF11Q15544 211 aa13.08□□□□□ -0.32
SCN1B-204ENST00000596348 OR2T5Q6IEZ7 315 aa13.08□□□□□ -0.32
SCN1B-204ENST00000596348 ADAM5Q6NVV9 412 aa13.08□□□□□ -0.32
SCN1B-204ENST00000596348 ZNF813Q6ZN06 617 aa13.08□□□□□ -0.32
SCN1B-204ENST00000596348 HDDC2Q7Z4H3 204 aa13.08□□□□□ -0.32
SCN1B-204ENST00000596348 CLDN22Q8N7P3 220 aa13.08□□□□□ -0.32
SCN1B-204ENST00000596348 KBTBD8Q8NFY9 601 aa13.08□□□□□ -0.32
SCN1B-204ENST00000596348 OR9Q2Q8NGE9 314 aa13.08□□□□□ -0.32
SCN1B-204ENST00000596348 OR2T29Q8NH02 315 aa13.08□□□□□ -0.32
SCN1B-204ENST00000596348 HTRA1Q92743 480 aa13.08□□□□□ -0.32
SCN1B-204ENST00000596348 POP5Q969H6 163 aaKnown RBP13.08□□□□□ -0.32
SCN1B-204ENST00000596348 MCHR2Q969V1 340 aa13.08□□□□□ -0.32
SCN1B-204ENST00000596348 KCNK17Q96T54 332 aa13.08□□□□□ -0.32
SCN1B-204ENST00000596348 FOXB1Q99853 325 aa13.08□□□□□ -0.32
SCN1B-204ENST00000596348 CHID1Q9BWS9 393 aa13.08□□□□□ -0.32
SCN1B-204ENST00000596348 OBP2BQ9NPH6 170 aa13.08□□□□□ -0.32
SCN1B-204ENST00000596348 CCM2LQ9NUG4 571 aaPredicted RBP13.08□□□□□ -0.32
SCN1B-204ENST00000596348 IL20RAQ9UHF4 553 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 61.1 ms