RNA–Protein interactions for RNA: ENST00000594092.5

VRK3-207, Transcript of vaccinia related kinase 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VRK3, Length 1,831 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-207ENST00000594092 CTF1Q16619 201 aa13.57□□□□□ -0.24
VRK3-207ENST00000594092 TSTQ16762 297 aaKnown RBP13.57□□□□□ -0.24
VRK3-207ENST00000594092 SLC35D3Q5M8T2 416 aa13.57□□□□□ -0.24
VRK3-207ENST00000594092 HBMQ6B0K9 141 aa13.57□□□□□ -0.24
VRK3-207ENST00000594092 TMEM225Q6GV28 225 aa13.57□□□□□ -0.24
VRK3-207ENST00000594092 GPAT4Q86UL3 456 aa13.57□□□□□ -0.24
VRK3-207ENST00000594092 UEVLDQ8IX04 471 aa13.57□□□□□ -0.24
VRK3-207ENST00000594092 OR51L1Q8NGJ5 315 aa13.57□□□□□ -0.24
VRK3-207ENST00000594092 TXNDC15Q96J42 360 aa13.57□□□□□ -0.24
VRK3-207ENST00000594092 OXGR1Q96P68 337 aa13.57□□□□□ -0.24
VRK3-207ENST00000594092 OPALINQ96PE5 141 aa13.57□□□□□ -0.24
VRK3-207ENST00000594092 TSSK2Q96PF2 358 aa13.57□□□□□ -0.24
VRK3-207ENST00000594092 SNX18Q96RF0 628 aa13.57□□□□□ -0.24
VRK3-207ENST00000594092 UCN2Q96RP3 112 aa13.57□□□□□ -0.24
VRK3-207ENST00000594092 DCUN1D5Q9BTE7 237 aa13.57□□□□□ -0.24
VRK3-207ENST00000594092 ZDHHC11Q9H8X9 412 aa13.57□□□□□ -0.24
VRK3-207ENST00000594092 INPP5EQ9NRR6 644 aa13.57□□□□□ -0.24
VRK3-207ENST00000594092 MED29Q9NX70 200 aa13.57□□□□□ -0.24
VRK3-207ENST00000594092 NPIPA1Q9UND3 350 aa13.57□□□□□ -0.24
VRK3-207ENST00000594092 LIPGQ9Y5X9 500 aa13.57□□□□□ -0.24
VRK3-207ENST00000594092 ANKRD11Q6UB99 2663 aaPredicted RBP13.56□□□□□ -0.24
VRK3-207ENST00000594092 IGHV3-15A0A0B4J1V0 119 aa13.56□□□□□ -0.24
VRK3-207ENST00000594092 LOC102725191A0A1B0GVB3 256 aa13.56□□□□□ -0.24
VRK3-207ENST00000594092 A0A1W2PPW3 197 aa13.56□□□□□ -0.24
VRK3-207ENST00000594092 PRSS37A4D1T9 235 aa13.56□□□□□ -0.24
VRK3-207ENST00000594092 J3QRE1 110 aa13.56□□□□□ -0.24
VRK3-207ENST00000594092 SLC22A1O15245 554 aa13.56□□□□□ -0.24
VRK3-207ENST00000594092 PDGFAP04085 211 aa13.56□□□□□ -0.24
VRK3-207ENST00000594092 ITGB2P05107 769 aa13.56□□□□□ -0.24
VRK3-207ENST00000594092 LIMS3P0CW19 117 aa13.56□□□□□ -0.24
VRK3-207ENST00000594092 LIMS4P0CW20 117 aa13.56□□□□□ -0.24
VRK3-207ENST00000594092 CARD18P57730 90 aa13.56□□□□□ -0.24
VRK3-207ENST00000594092 PON3Q15166 354 aa13.56□□□□□ -0.24
VRK3-207ENST00000594092 ASB18Q6ZVZ8 466 aa13.56□□□□□ -0.24
VRK3-207ENST00000594092 LHFPL3Q86UP9 236 aa13.56□□□□□ -0.24
VRK3-207ENST00000594092 WDFY1Q8IWB7 410 aa13.56□□□□□ -0.24
VRK3-207ENST00000594092 PM20D2Q8IYS1 436 aa13.56□□□□□ -0.24
VRK3-207ENST00000594092 KLHL36Q8N4N3 616 aa13.56□□□□□ -0.24
VRK3-207ENST00000594092 ACBD7Q8N6N7 88 aa13.56□□□□□ -0.24
VRK3-207ENST00000594092 NAA11Q9BSU3 229 aaPredicted RBP13.56□□□□□ -0.24
VRK3-207ENST00000594092 SYT4Q9H2B2 425 aa13.56□□□□□ -0.24
VRK3-207ENST00000594092 ERVK13-1Q9NX77 482 aa13.56□□□□□ -0.24
VRK3-207ENST00000594092 RASD1Q9Y272 281 aa13.56□□□□□ -0.24
VRK3-207ENST00000594092 RAXQ9Y2V3 346 aa13.56□□□□□ -0.24
VRK3-207ENST00000594092 A6NIZ1 184 aa13.55□□□□□ -0.24
VRK3-207ENST00000594092 DCTN6O00399 190 aa13.55□□□□□ -0.24
VRK3-207ENST00000594092 TRAF3IP2O43734 574 aaPredicted RBP13.55□□□□□ -0.24
VRK3-207ENST00000594092 CXCL13O43927 109 aa13.55□□□□□ -0.24
VRK3-207ENST00000594092 SBK2P0C263 348 aa13.55□□□□□ -0.24
VRK3-207ENST00000594092 PYCR1P32322 319 aa13.55□□□□□ -0.24
VRK3-207ENST00000594092 CLDN18P56856 261 aa13.55□□□□□ -0.24
VRK3-207ENST00000594092 RAP1BP61224 184 aa13.55□□□□□ -0.24
VRK3-207ENST00000594092 RAP1AP62834 184 aa13.55□□□□□ -0.24
VRK3-207ENST00000594092 NFATC3Q12968 1075 aa13.55□□□□□ -0.24
VRK3-207ENST00000594092 OR2G6Q5TZ20 316 aa13.55□□□□□ -0.24
VRK3-207ENST00000594092 POMGNT2Q8NAT1 580 aa13.55□□□□□ -0.24
VRK3-207ENST00000594092 OR10D3Q8NH80 312 aa13.55□□□□□ -0.24
VRK3-207ENST00000594092 ZMYND19Q96E35 227 aaPredicted RBP13.55□□□□□ -0.24
VRK3-207ENST00000594092 ZHX1-C8orf76Q96EF9 292 aa13.55□□□□□ -0.24
VRK3-207ENST00000594092 MYCBPQ99417 103 aaPredicted RBP13.55□□□□□ -0.24
VRK3-207ENST00000594092 DEFB127Q9H1M4 99 aa13.55□□□□□ -0.24
VRK3-207ENST00000594092 ADGRL4Q9HBW9 690 aa13.55□□□□□ -0.24
VRK3-207ENST00000594092 SRA1Q9HD15 236 aaKnown RBP13.55□□□□□ -0.24
VRK3-207ENST00000594092 VSX1Q9NZR4 365 aaPredicted RBP13.55□□□□□ -0.24
VRK3-207ENST00000594092 ZNF407Q9C0G0 2248 aa13.55□□□□□ -0.24
VRK3-207ENST00000594092 IGF2RP11717 2491 aa13.55□□□□□ -0.24
VRK3-207ENST00000594092 DAPL1A0PJW8 107 aa13.55□□□□□ -0.24
VRK3-207ENST00000594092 SLC22A23A1A5C7 686 aa13.55□□□□□ -0.24
VRK3-207ENST00000594092 C12orf71A8MTZ7 269 aa13.55□□□□□ -0.24
VRK3-207ENST00000594092 MKRN2OSH3BPM6 223 aa13.55□□□□□ -0.24
VRK3-207ENST00000594092 K7EM74 188 aa13.55□□□□□ -0.24
VRK3-207ENST00000594092 SMAD9O15198 467 aaKnown RBP13.55□□□□□ -0.24
VRK3-207ENST00000594092 AIREO43918 545 aa13.55□□□□□ -0.24
VRK3-207ENST00000594092 GLCEO94923 617 aa13.55□□□□□ -0.24
VRK3-207ENST00000594092 MRPL3P09001 348 aaKnown RBP13.55□□□□□ -0.24
VRK3-207ENST00000594092 ZNF43P17038 809 aa13.55□□□□□ -0.24
VRK3-207ENST00000594092 ENPP1P22413 925 aa13.55□□□□□ -0.24
VRK3-207ENST00000594092 PAX7P23759 505 aa13.55□□□□□ -0.24
VRK3-207ENST00000594092 GADD45AP24522 165 aa13.55□□□□□ -0.24
VRK3-207ENST00000594092 PLA2G5P39877 138 aa13.55□□□□□ -0.24
VRK3-207ENST00000594092 EIF1AXP47813 144 aaKnown RBP13.55□□□□□ -0.24
VRK3-207ENST00000594092 BIDP55957 195 aa13.55□□□□□ -0.24
VRK3-207ENST00000594092 LSM3P62310 102 aaKnown RBP13.55□□□□□ -0.24
VRK3-207ENST00000594092 ACTC1P68032 377 aa13.55□□□□□ -0.24
VRK3-207ENST00000594092 ACTA1P68133 377 aa13.55□□□□□ -0.24
VRK3-207ENST00000594092 LSAMPQ13449 338 aa13.55□□□□□ -0.24
VRK3-207ENST00000594092 AQP6Q13520 282 aa13.55□□□□□ -0.24
VRK3-207ENST00000594092 GGTLC2Q14390 218 aa13.55□□□□□ -0.24
VRK3-207ENST00000594092 ZNF169Q14929 603 aaPredicted RBP13.55□□□□□ -0.24
VRK3-207ENST00000594092 TIMM50Q3ZCQ8 353 aa13.55□□□□□ -0.24
VRK3-207ENST00000594092 LINC01590Q5TEZ4 76 aa13.55□□□□□ -0.24
VRK3-207ENST00000594092 FAM205BPQ63HN1 556 aa13.55□□□□□ -0.24
VRK3-207ENST00000594092 LRRC69Q6ZNQ3 347 aa13.55□□□□□ -0.24
VRK3-207ENST00000594092 OR6V1Q8N148 313 aa13.55□□□□□ -0.24
VRK3-207ENST00000594092 OR10H4Q8NGA5 316 aa13.55□□□□□ -0.24
VRK3-207ENST00000594092 OR52N1Q8NH53 320 aa13.55□□□□□ -0.24
VRK3-207ENST00000594092 NEIL3Q8TAT5 605 aa13.55□□□□□ -0.24
VRK3-207ENST00000594092 ABTB1Q969K4 478 aaPredicted RBP13.55□□□□□ -0.24
VRK3-207ENST00000594092 KCNK17Q96T54 332 aa13.55□□□□□ -0.24
VRK3-207ENST00000594092 CNN2Q99439 309 aaKnown RBP13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms