RNA–Protein interactions for RNA: ENST00000590266.5

SCAMP4-212, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 5

Gene SCAMP4, Length 570 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-212ENST00000590266 IGHV1-18A0A0C4DH31 117 aa12.25□□□□□ -0.45
SCAMP4-212ENST00000590266 A0A1W2PRQ8 180 aa12.25□□□□□ -0.45
SCAMP4-212ENST00000590266 ATP6V1G2-DDX39BF2Z307 99 aa12.25□□□□□ -0.45
SCAMP4-212ENST00000590266 CDC42EP2O14613 210 aa12.25□□□□□ -0.45
SCAMP4-212ENST00000590266 GADD45GO95257 159 aa12.25□□□□□ -0.45
SCAMP4-212ENST00000590266 SEMG1P04279 462 aa12.25□□□□□ -0.45
SCAMP4-212ENST00000590266 QDPRP09417 244 aa12.25□□□□□ -0.45
SCAMP4-212ENST00000590266 PGA4P0DJD7 388 aa12.25□□□□□ -0.45
SCAMP4-212ENST00000590266 PGA3P0DJD8 388 aa12.25□□□□□ -0.45
SCAMP4-212ENST00000590266 CD99P14209 185 aa12.25□□□□□ -0.45
SCAMP4-212ENST00000590266 RPL4P36578 427 aaKnown RBP12.25□□□□□ -0.45
SCAMP4-212ENST00000590266 CTXN1P60606 82 aa12.25□□□□□ -0.45
SCAMP4-212ENST00000590266 NKX6-1P78426 367 aaPredicted RBP12.25□□□□□ -0.45
SCAMP4-212ENST00000590266 PIGFQ07326 219 aa12.25□□□□□ -0.45
SCAMP4-212ENST00000590266 CD47Q08722 323 aa12.25□□□□□ -0.45
SCAMP4-212ENST00000590266 DGCR6Q14129 220 aa12.25□□□□□ -0.45
SCAMP4-212ENST00000590266 MDP1Q86V88 176 aa12.25□□□□□ -0.45
SCAMP4-212ENST00000590266 DHFR2Q86XF0 187 aa12.25□□□□□ -0.45
SCAMP4-212ENST00000590266 ZDHHC21Q8IVQ6 265 aa12.25□□□□□ -0.45
SCAMP4-212ENST00000590266 NOXO1Q8NFA2 376 aa12.25□□□□□ -0.45
SCAMP4-212ENST00000590266 LIPHQ8WWY8 451 aa12.25□□□□□ -0.45
SCAMP4-212ENST00000590266 TMEM54Q969K7 222 aa12.25□□□□□ -0.45
SCAMP4-212ENST00000590266 GTPBP3Q969Y2 492 aaKnown RBP12.25□□□□□ -0.45
SCAMP4-212ENST00000590266 SLC38A2Q96QD8 506 aa12.25□□□□□ -0.45
SCAMP4-212ENST00000590266 TNFRSF13CQ96RJ3 184 aa12.25□□□□□ -0.45
SCAMP4-212ENST00000590266 FOXB1Q99853 325 aa12.25□□□□□ -0.45
SCAMP4-212ENST00000590266 THTPAQ9BU02 230 aa12.25□□□□□ -0.45
SCAMP4-212ENST00000590266 ANKRD19PQ9H560 264 aa12.25□□□□□ -0.45
SCAMP4-212ENST00000590266 CXorf56Q9H5V9 222 aa12.25□□□□□ -0.45
SCAMP4-212ENST00000590266 ACTR3BQ9P1U1 418 aa12.25□□□□□ -0.45
SCAMP4-212ENST00000590266 HIF3AQ9Y2N7 669 aa12.25□□□□□ -0.45
SCAMP4-212ENST00000590266 HIVEP1P15822 2718 aa12.25□□□□□ -0.45
SCAMP4-212ENST00000590266 CELSR1Q9NYQ6 3014 aa12.24□□□□□ -0.45
SCAMP4-212ENST00000590266 ZNF503-AS2A6NEH8 195 aa12.24□□□□□ -0.45
SCAMP4-212ENST00000590266 TRMUO75648 421 aaKnown RBP12.24□□□□□ -0.45
SCAMP4-212ENST00000590266 STAMBPO95630 424 aa12.24□□□□□ -0.45
SCAMP4-212ENST00000590266 HLA-HP01893 362 aa12.24□□□□□ -0.45
SCAMP4-212ENST00000590266 SOD3P08294 240 aa12.24□□□□□ -0.45
SCAMP4-212ENST00000590266 CELA3BP08861 270 aa12.24□□□□□ -0.45
SCAMP4-212ENST00000590266 ACADSP16219 412 aa12.24□□□□□ -0.45
SCAMP4-212ENST00000590266 RRM2P31350 389 aa12.24□□□□□ -0.45
SCAMP4-212ENST00000590266 ACVR1BP36896 505 aa12.24□□□□□ -0.45
SCAMP4-212ENST00000590266 SLC9A3P48764 834 aa12.24□□□□□ -0.45
SCAMP4-212ENST00000590266 IDH3GP51553 393 aaPredicted RBP12.24□□□□□ -0.45
SCAMP4-212ENST00000590266 RPS4XP62701 263 aaKnown RBP12.24□□□□□ -0.45
SCAMP4-212ENST00000590266 SEC23BQ15437 767 aa12.24□□□□□ -0.45
SCAMP4-212ENST00000590266 B3GLCTQ6Y288 498 aa12.24□□□□□ -0.45
SCAMP4-212ENST00000590266 HDDC2Q7Z4H3 204 aa12.24□□□□□ -0.45
SCAMP4-212ENST00000590266 ARHGAP24Q8N264 748 aa12.24□□□□□ -0.45
SCAMP4-212ENST00000590266 OR4K5Q8NGD3 323 aa12.24□□□□□ -0.45
SCAMP4-212ENST00000590266 MAGEE2Q8TD90 523 aaPredicted RBP12.24□□□□□ -0.45
SCAMP4-212ENST00000590266 SPG11Q96JI7 2443 aa12.24□□□□□ -0.45
SCAMP4-212ENST00000590266 LRGUKQ96M69 825 aa12.24□□□□□ -0.45
SCAMP4-212ENST00000590266 CXXC4Q9H2H0 198 aa12.24□□□□□ -0.45
SCAMP4-212ENST00000590266 TXNIPQ9H3M7 391 aa12.24□□□□□ -0.45
SCAMP4-212ENST00000590266 SEC61A2Q9H9S3 476 aa12.24□□□□□ -0.45
SCAMP4-212ENST00000590266 KRCC1Q9NPI7 259 aaPredicted RBP12.24□□□□□ -0.45
SCAMP4-212ENST00000590266 FAIMQ9NVQ4 179 aa12.24□□□□□ -0.45
SCAMP4-212ENST00000590266 TAS2R1Q9NYW7 299 aa12.24□□□□□ -0.45
SCAMP4-212ENST00000590266 PRPF19Q9UMS4 504 aaKnown RBP12.24□□□□□ -0.45
SCAMP4-212ENST00000590266 AURKCQ9UQB9 309 aa12.24□□□□□ -0.45
SCAMP4-212ENST00000590266 TMEM5Q9Y2B1 443 aa12.24□□□□□ -0.45
SCAMP4-212ENST00000590266 HTR3EA5X5Y0 456 aa12.23□□□□□ -0.45
SCAMP4-212ENST00000590266 E7EQL1 145 aa12.23□□□□□ -0.45
SCAMP4-212ENST00000590266 GYG2O15488 501 aa12.23□□□□□ -0.45
SCAMP4-212ENST00000590266 DHHO43323 396 aa12.23□□□□□ -0.45
SCAMP4-212ENST00000590266 SLC2A10O95528 541 aa12.23□□□□□ -0.45
SCAMP4-212ENST00000590266 CRYAAP02489 173 aa12.23□□□□□ -0.45
SCAMP4-212ENST00000590266 CECR9P0C854 216 aa12.23□□□□□ -0.45
SCAMP4-212ENST00000590266 CDKN1AP38936 164 aa12.23□□□□□ -0.45
SCAMP4-212ENST00000590266 PTDSS1P48651 473 aaKnown RBP12.23□□□□□ -0.45
SCAMP4-212ENST00000590266 FABP6P51161 128 aa12.23□□□□□ -0.45
SCAMP4-212ENST00000590266 SMIM11AP58511 58 aa12.23□□□□□ -0.45
SCAMP4-212ENST00000590266 ERVK-25P63136 954 aa12.23□□□□□ -0.45
SCAMP4-212ENST00000590266 MS4A2Q01362 244 aa12.23□□□□□ -0.45
SCAMP4-212ENST00000590266 FMODQ06828 376 aa12.23□□□□□ -0.45
SCAMP4-212ENST00000590266 TRIM25Q14258 630 aaKnown RBP12.23□□□□□ -0.45
SCAMP4-212ENST00000590266 PGGHGQ32M88 737 aa12.23□□□□□ -0.45
SCAMP4-212ENST00000590266 ZBED5Q49AG3 693 aa12.23□□□□□ -0.45
SCAMP4-212ENST00000590266 LRFN4Q6PJG9 635 aa12.23□□□□□ -0.45
SCAMP4-212ENST00000590266 VHLLQ6RSH7 139 aa12.23□□□□□ -0.45
SCAMP4-212ENST00000590266 MYPOPQ86VE0 399 aaPredicted RBP12.23□□□□□ -0.45
SCAMP4-212ENST00000590266 CLDN22Q8N7P3 220 aa12.23□□□□□ -0.45
SCAMP4-212ENST00000590266 WFDC11Q8NEX6 87 aa12.23□□□□□ -0.45
SCAMP4-212ENST00000590266 NANOS1Q8WY41 292 aaKnown RBP12.23□□□□□ -0.45
SCAMP4-212ENST00000590266 NSMAFQ92636 917 aa12.23□□□□□ -0.45
SCAMP4-212ENST00000590266 HDAC2Q92769 488 aaKnown RBP12.23□□□□□ -0.45
SCAMP4-212ENST00000590266 MCHR2Q969V1 340 aa12.23□□□□□ -0.45
SCAMP4-212ENST00000590266 BOD1Q96IK1 185 aa12.23□□□□□ -0.45
SCAMP4-212ENST00000590266 SH3GL3Q99963 347 aa12.23□□□□□ -0.45
SCAMP4-212ENST00000590266 KATNB1Q9BVA0 655 aa12.23□□□□□ -0.45
SCAMP4-212ENST00000590266 IL20RAQ9UHF4 553 aa12.23□□□□□ -0.45
SCAMP4-212ENST00000590266 ZNF346Q9UL40 294 aaKnown RBP12.23□□□□□ -0.45
SCAMP4-212ENST00000590266 TMCC3Q9ULS5 477 aa12.23□□□□□ -0.45
SCAMP4-212ENST00000590266 C2CD3Q4AC94 2353 aa12.23□□□□□ -0.45
SCAMP4-212ENST00000590266 H7C1C5 153 aa12.22□□□□□ -0.45
SCAMP4-212ENST00000590266 OR10H3O60404 316 aa12.22□□□□□ -0.45
SCAMP4-212ENST00000590266 RAB36O95755 333 aa12.22□□□□□ -0.45
SCAMP4-212ENST00000590266 TSPAN19P0C672 248 aa12.22□□□□□ -0.45
SCAMP4-212ENST00000590266 DANCRP0C864 163 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms