RNA–Protein interactions for RNA: ENST00000589753.1

ATG4D-211, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4D, Length 931 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-211ENST00000589753 OR6C65A6NJZ3 312 aa13.43□□□□□ -0.26
ATG4D-211ENST00000589753 PYCARD-AS1I3L0S3 204 aa13.43□□□□□ -0.26
ATG4D-211ENST00000589753 SMNDC1O75940 238 aaKnown RBP eCLIP13.43□□□□□ -0.26
ATG4D-211ENST00000589753 CGAP01215 116 aa13.43□□□□□ -0.26
ATG4D-211ENST00000589753 IFNGP01579 166 aa13.43□□□□□ -0.26
ATG4D-211ENST00000589753 CD8BP10966 210 aa13.43□□□□□ -0.26
ATG4D-211ENST00000589753 EDNRAP25101 427 aa13.43□□□□□ -0.26
ATG4D-211ENST00000589753 CSNK1A1P48729 337 aa13.43□□□□□ -0.26
ATG4D-211ENST00000589753 AQP4P55087 323 aa13.43□□□□□ -0.26
ATG4D-211ENST00000589753 KHDRBS1Q07666 443 aaKnown RBP eCLIP13.43□□□□□ -0.26
ATG4D-211ENST00000589753 TSPO2Q5TGU0 170 aa13.43□□□□□ -0.26
ATG4D-211ENST00000589753 C12orf73Q69YU5 71 aa13.43□□□□□ -0.26
ATG4D-211ENST00000589753 TFAP2EQ6VUC0 442 aa13.43□□□□□ -0.26
ATG4D-211ENST00000589753 C20orf196Q8IYI0 205 aa13.43□□□□□ -0.26
ATG4D-211ENST00000589753 NOXO1Q8NFA2 376 aa13.43□□□□□ -0.26
ATG4D-211ENST00000589753 OR52E2Q8NGJ4 325 aa13.43□□□□□ -0.26
ATG4D-211ENST00000589753 OR6N1Q8NGY5 312 aa13.43□□□□□ -0.26
ATG4D-211ENST00000589753 OR4K13Q8NH42 304 aa13.43□□□□□ -0.26
ATG4D-211ENST00000589753 HRASLS5Q96KN8 279 aa13.43□□□□□ -0.26
ATG4D-211ENST00000589753 LRR1Q96L50 414 aa13.43□□□□□ -0.26
ATG4D-211ENST00000589753 SLC38A2Q96QD8 506 aa13.43□□□□□ -0.26
ATG4D-211ENST00000589753 KCNK17Q96T54 332 aa13.43□□□□□ -0.26
ATG4D-211ENST00000589753 ALG12Q9BV10 488 aa13.43□□□□□ -0.26
ATG4D-211ENST00000589753 LINC00470Q9BZP3 86 aa13.43□□□□□ -0.26
ATG4D-211ENST00000589753 SLCO5A1Q9H2Y9 848 aa13.43□□□□□ -0.26
ATG4D-211ENST00000589753 PIGMQ9H3S5 423 aa13.43□□□□□ -0.26
ATG4D-211ENST00000589753 TVP23BQ9NYZ1 205 aa13.43□□□□□ -0.26
ATG4D-211ENST00000589753 KLHL21Q9UJP4 597 aa13.43□□□□□ -0.26
ATG4D-211ENST00000589753 FAM208BQ5VWN6 2430 aa13.43□□□□□ -0.26
ATG4D-211ENST00000589753 LOC100130705A0A1B0GUX0 176 aa13.42□□□□□ -0.26
ATG4D-211ENST00000589753 PRSS37A4D1T9 235 aa13.42□□□□□ -0.26
ATG4D-211ENST00000589753 RIIAD1A6NNX1 92 aa13.42□□□□□ -0.26
ATG4D-211ENST00000589753 E9PQ18 207 aa13.42□□□□□ -0.26
ATG4D-211ENST00000589753 H7C1C5 153 aa13.42□□□□□ -0.26
ATG4D-211ENST00000589753 SURF4O15260 269 aa13.42□□□□□ -0.26
ATG4D-211ENST00000589753 SLC16A6O15403 523 aa13.42□□□□□ -0.26
ATG4D-211ENST00000589753 AHCYL1O43865 530 aa13.42□□□□□ -0.26
ATG4D-211ENST00000589753 UPK3AO75631 287 aa13.42□□□□□ -0.26
ATG4D-211ENST00000589753 KRT33AO76009 404 aa13.42□□□□□ -0.26
ATG4D-211ENST00000589753 SLC2A10O95528 541 aa13.42□□□□□ -0.26
ATG4D-211ENST00000589753 IGHV3-9P01782 118 aa13.42□□□□□ -0.26
ATG4D-211ENST00000589753 NR2C1P13056 603 aa13.42□□□□□ -0.26
ATG4D-211ENST00000589753 ZNF3P17036 446 aa13.42□□□□□ -0.26
ATG4D-211ENST00000589753 CHRNB4P30926 498 aa13.42□□□□□ -0.26
ATG4D-211ENST00000589753 GGT2P36268 569 aa13.42□□□□□ -0.26
ATG4D-211ENST00000589753 CDKN2AP42771 156 aaKnown RBP13.42□□□□□ -0.26
ATG4D-211ENST00000589753 CDC42P60953 191 aa13.42□□□□□ -0.26
ATG4D-211ENST00000589753 LCN6P62502 163 aa13.42□□□□□ -0.26
ATG4D-211ENST00000589753 CD47Q08722 323 aa13.42□□□□□ -0.26
ATG4D-211ENST00000589753 ITGADQ13349 1161 aa13.42□□□□□ -0.26
ATG4D-211ENST00000589753 SNAPC1Q16533 368 aa13.42□□□□□ -0.26
ATG4D-211ENST00000589753 LEG1Q6P5S2 330 aa13.42□□□□□ -0.26
ATG4D-211ENST00000589753 IZUMO2Q6UXV1 221 aa13.42□□□□□ -0.26
ATG4D-211ENST00000589753 PTCHD4Q6ZW05 846 aa13.42□□□□□ -0.26
ATG4D-211ENST00000589753 LIX1LQ8IVB5 337 aa13.42□□□□□ -0.26
ATG4D-211ENST00000589753 UBE2J2Q8N2K1 259 aa13.42□□□□□ -0.26
ATG4D-211ENST00000589753 GPR137CQ8N3F9 429 aa13.42□□□□□ -0.26
ATG4D-211ENST00000589753 DHRSXQ8N5I4 330 aa13.42□□□□□ -0.26
ATG4D-211ENST00000589753 POMGNT2Q8NAT1 580 aa13.42□□□□□ -0.26
ATG4D-211ENST00000589753 SYT14Q8NB59 555 aa13.42□□□□□ -0.26
ATG4D-211ENST00000589753 SDR9C7Q8NEX9 313 aa13.42□□□□□ -0.26
ATG4D-211ENST00000589753 CYGBQ8WWM9 190 aa13.42□□□□□ -0.26
ATG4D-211ENST00000589753 ASB5Q8WWX0 329 aa13.42□□□□□ -0.26
ATG4D-211ENST00000589753 TMEM54Q969K7 222 aa13.42□□□□□ -0.26
ATG4D-211ENST00000589753 PLEKHA8Q96JA3 519 aa13.42□□□□□ -0.26
ATG4D-211ENST00000589753 SNX18Q96RF0 628 aa13.42□□□□□ -0.26
ATG4D-211ENST00000589753 NMNAT3Q96T66 252 aa13.42□□□□□ -0.26
ATG4D-211ENST00000589753 ADI1Q9BV57 179 aa13.42□□□□□ -0.26
ATG4D-211ENST00000589753 OPN3Q9H1Y3 402 aaPredicted RBP13.42□□□□□ -0.26
ATG4D-211ENST00000589753 B3GAT2Q9NPZ5 323 aa13.42□□□□□ -0.26
ATG4D-211ENST00000589753 CMC2Q9NRP2 79 aa13.42□□□□□ -0.26
ATG4D-211ENST00000589753 SLC7A10Q9NS82 523 aa13.42□□□□□ -0.26
ATG4D-211ENST00000589753 GLTPQ9NZD2 209 aa13.42□□□□□ -0.26
ATG4D-211ENST00000589753 UPB1Q9UBR1 384 aa13.42□□□□□ -0.26
ATG4D-211ENST00000589753 PRSS50Q9UI38 385 aa13.42□□□□□ -0.26
ATG4D-211ENST00000589753 FOXD3Q9UJU5 478 aaPredicted RBP13.42□□□□□ -0.26
ATG4D-211ENST00000589753 NDRG4Q9ULP0 352 aaKnown RBP13.42□□□□□ -0.26
ATG4D-211ENST00000589753 GMPPBQ9Y5P6 360 aa13.42□□□□□ -0.26
ATG4D-211ENST00000589753 CFAP46Q8IYW2 2715 aa13.42□□□□□ -0.26
ATG4D-211ENST00000589753 POLEQ07864 2286 aa13.41□□□□□ -0.26
ATG4D-211ENST00000589753 SLC22A23A1A5C7 686 aa13.41□□□□□ -0.26
ATG4D-211ENST00000589753 M0R3G1 203 aa13.41□□□□□ -0.26
ATG4D-211ENST00000589753 RENP00797 406 aa13.41□□□□□ -0.26
ATG4D-211ENST00000589753 PLA2G2AP14555 144 aa13.41□□□□□ -0.26
ATG4D-211ENST00000589753 LGALS3BPQ08380 585 aa13.41□□□□□ -0.26
ATG4D-211ENST00000589753 KEAP1Q14145 624 aa13.41□□□□□ -0.26
ATG4D-211ENST00000589753 HIST3H3Q16695 136 aa13.41□□□□□ -0.26
ATG4D-211ENST00000589753 PHYHD1Q5SRE7 291 aa13.41□□□□□ -0.26
ATG4D-211ENST00000589753 ZNF362Q5T0B9 420 aaPredicted RBP13.41□□□□□ -0.26
ATG4D-211ENST00000589753 TTC23Q5W5X9 447 aa13.41□□□□□ -0.26
ATG4D-211ENST00000589753 FBXW9Q5XUX1 488 aa13.41□□□□□ -0.26
ATG4D-211ENST00000589753 ZNF610Q8N9Z0 462 aa13.41□□□□□ -0.26
ATG4D-211ENST00000589753 RELL2Q8NC24 303 aaPredicted RBP13.41□□□□□ -0.26
ATG4D-211ENST00000589753 SLC37A3Q8NCC5 494 aa13.41□□□□□ -0.26
ATG4D-211ENST00000589753 NPEPL1Q8NDH3 523 aa13.41□□□□□ -0.26
ATG4D-211ENST00000589753 FNDC8Q8TC99 324 aa13.41□□□□□ -0.26
ATG4D-211ENST00000589753 ALKBH3Q96Q83 286 aaPredicted RBP13.41□□□□□ -0.26
ATG4D-211ENST00000589753 RBP7Q96R05 134 aa13.41□□□□□ -0.26
ATG4D-211ENST00000589753 PITX2Q99697 317 aa13.41□□□□□ -0.26
ATG4D-211ENST00000589753 VSX1Q9NZR4 365 aaPredicted RBP13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms