RNA–Protein interactions for RNA: ENST00000589216.1

PTPN2-208, Transcript of protein tyrosine phosphatase, non-receptor type 2, humanhuman

TSL 3

Gene PTPN2, Length 646 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN2-208ENST00000589216 ZNF347Q96SE7 839 aa8.59□□□□□ -1.03
PTPN2-208ENST00000589216 CDRT15Q96T59 188 aa8.59□□□□□ -1.03
PTPN2-208ENST00000589216 FNDC11Q9BVV2 318 aa8.59□□□□□ -1.03
PTPN2-208ENST00000589216 DCAF13Q9NV06 445 aaKnown RBP8.59□□□□□ -1.03
PTPN2-208ENST00000589216 ZNF701Q9NV72 531 aaPredicted RBP8.59□□□□□ -1.03
PTPN2-208ENST00000589216 NDUFAF4Q9P032 175 aa8.59□□□□□ -1.03
PTPN2-208ENST00000589216 CRNNQ9UBG3 495 aaPredicted RBP8.59□□□□□ -1.03
PTPN2-208ENST00000589216 MOKQ9UQ07 419 aa8.59□□□□□ -1.03
PTPN2-208ENST00000589216 HIF3AQ9Y2N7 669 aa8.59□□□□□ -1.03
PTPN2-208ENST00000589216 ENPP4Q9Y6X5 453 aa8.59□□□□□ -1.03
PTPN2-208ENST00000589216 CSPG4Q6UVK1 2322 aa8.59□□□□□ -1.03
PTPN2-208ENST00000589216 NIPBLQ6KC79 2804 aaeCLIP8.58□□□□□ -1.04
PTPN2-208ENST00000589216 IGKV1D-43A0A0B4J1Z2 117 aa8.58□□□□□ -1.04
PTPN2-208ENST00000589216 TRBV4-1A0A0J9YWV2 114 aa8.58□□□□□ -1.04
PTPN2-208ENST00000589216 SLC2A10O95528 541 aa8.58□□□□□ -1.04
PTPN2-208ENST00000589216 WNT11O96014 354 aa8.58□□□□□ -1.04
PTPN2-208ENST00000589216 IGKV3-15P01624 115 aa8.58□□□□□ -1.04
PTPN2-208ENST00000589216 IGHV4-39P01824 125 aa8.58□□□□□ -1.04
PTPN2-208ENST00000589216 T-ENOLP0DO92 83 aa8.58□□□□□ -1.04
PTPN2-208ENST00000589216 CD99P14209 185 aa8.58□□□□□ -1.04
PTPN2-208ENST00000589216 PAX1P15863 534 aa8.58□□□□□ -1.04
PTPN2-208ENST00000589216 UBE2NP61088 152 aaKnown RBP8.58□□□□□ -1.04
PTPN2-208ENST00000589216 MXRA7P84157 204 aa8.58□□□□□ -1.04
PTPN2-208ENST00000589216 NPRL3Q12980 569 aa8.58□□□□□ -1.04
PTPN2-208ENST00000589216 TOP3AQ13472 1001 aaPredicted RBP8.58□□□□□ -1.04
PTPN2-208ENST00000589216 LAPTM4AQ15012 233 aa8.58□□□□□ -1.04
PTPN2-208ENST00000589216 SEC23BQ15437 767 aa8.58□□□□□ -1.04
PTPN2-208ENST00000589216 SAMD4BQ5PRF9 694 aaKnown RBP8.58□□□□□ -1.04
PTPN2-208ENST00000589216 ARMC4Q5T2S8 1044 aa8.58□□□□□ -1.04
PTPN2-208ENST00000589216 GKAP1Q5VSY0 366 aaPredicted RBP8.58□□□□□ -1.04
PTPN2-208ENST00000589216 LRFN4Q6PJG9 635 aa8.58□□□□□ -1.04
PTPN2-208ENST00000589216 ZNF813Q6ZN06 617 aa8.58□□□□□ -1.04
PTPN2-208ENST00000589216 SSX8Q7RTT4 187 aa8.58□□□□□ -1.04
PTPN2-208ENST00000589216 YTHDF3Q7Z739 585 aaKnown RBP8.58□□□□□ -1.04
PTPN2-208ENST00000589216 CLDN22Q8N7P3 220 aa8.58□□□□□ -1.04
PTPN2-208ENST00000589216 LRRC75AQ8NAA5 344 aa8.58□□□□□ -1.04
PTPN2-208ENST00000589216 CCDC197Q8NCU1 140 aa8.58□□□□□ -1.04
PTPN2-208ENST00000589216 FGFBP3Q8TAT2 258 aa8.58□□□□□ -1.04
PTPN2-208ENST00000589216 SLC7A13Q8TCU3 470 aa8.58□□□□□ -1.04
PTPN2-208ENST00000589216 ACOT11Q8WXI4 607 aaPredicted RBP8.58□□□□□ -1.04
PTPN2-208ENST00000589216 SLC25A44Q96H78 314 aaPredicted RBP8.58□□□□□ -1.04
PTPN2-208ENST00000589216 RADILQ96JH8 1075 aa8.58□□□□□ -1.04
PTPN2-208ENST00000589216 LRR1Q96L50 414 aa8.58□□□□□ -1.04
PTPN2-208ENST00000589216 Q96MF0 132 aa8.58□□□□□ -1.04
PTPN2-208ENST00000589216 HS6ST2Q96MM7 605 aa8.58□□□□□ -1.04
PTPN2-208ENST00000589216 ZNF75AQ96N20 296 aa8.58□□□□□ -1.04
PTPN2-208ENST00000589216 SEPHS2Q99611 448 aa8.58□□□□□ -1.04
PTPN2-208ENST00000589216 FOXB1Q99853 325 aa8.58□□□□□ -1.04
PTPN2-208ENST00000589216 SMR3AQ99954 134 aa8.58□□□□□ -1.04
PTPN2-208ENST00000589216 FUZQ9BT04 418 aa8.58□□□□□ -1.04
PTPN2-208ENST00000589216 NMNAT1Q9HAN9 279 aaPredicted RBP8.58□□□□□ -1.04
PTPN2-208ENST00000589216 OBP2BQ9NPH6 170 aa8.58□□□□□ -1.04
PTPN2-208ENST00000589216 INIPQ9NRY2 104 aa8.58□□□□□ -1.04
PTPN2-208ENST00000589216 MAGEL2Q9UJ55 1249 aa8.58□□□□□ -1.04
PTPN2-208ENST00000589216 GDF2Q9UK05 429 aaPredicted RBP8.58□□□□□ -1.04
PTPN2-208ENST00000589216 RPS6KA6Q9UK32 745 aa8.58□□□□□ -1.04
PTPN2-208ENST00000589216 POU2F3Q9UKI9 436 aa8.58□□□□□ -1.04
PTPN2-208ENST00000589216 FN1P02751 2386 aaKnown RBP8.58□□□□□ -1.04
PTPN2-208ENST00000589216 ZNF726A6NNF4 738 aa8.57□□□□□ -1.04
PTPN2-208ENST00000589216 MCIDASD6RGH6 385 aa8.57□□□□□ -1.04
PTPN2-208ENST00000589216 PDE5AO76074 875 aa8.57□□□□□ -1.04
PTPN2-208ENST00000589216 HIST1H2ABP04908 130 aa8.57□□□□□ -1.04
PTPN2-208ENST00000589216 PATE4P0C8F1 98 aa8.57□□□□□ -1.04
PTPN2-208ENST00000589216 SAGP10523 405 aaPredicted RBP8.57□□□□□ -1.04
PTPN2-208ENST00000589216 CAPZA2P47755 286 aa8.57□□□□□ -1.04
PTPN2-208ENST00000589216 LIMS1P48059 325 aa8.57□□□□□ -1.04
PTPN2-208ENST00000589216 ATP5J2P56134 94 aa8.57□□□□□ -1.04
PTPN2-208ENST00000589216 NAAAQ02083 359 aa8.57□□□□□ -1.04
PTPN2-208ENST00000589216 HGFACQ04756 655 aa8.57□□□□□ -1.04
PTPN2-208ENST00000589216 PRKCDQ05655 676 aa8.57□□□□□ -1.04
PTPN2-208ENST00000589216 KRT72Q14CN4 511 aa8.57□□□□□ -1.04
PTPN2-208ENST00000589216 HIST3H3Q16695 136 aa8.57□□□□□ -1.04
PTPN2-208ENST00000589216 FGD3Q5JSP0 725 aa8.57□□□□□ -1.04
PTPN2-208ENST00000589216 PODNL1Q6PEZ8 512 aa8.57□□□□□ -1.04
PTPN2-208ENST00000589216 C16orf89Q6UX73 402 aa8.57□□□□□ -1.04
PTPN2-208ENST00000589216 ZNF730Q6ZMV8 503 aa8.57□□□□□ -1.04
PTPN2-208ENST00000589216 RINLQ6ZS11 566 aa8.57□□□□□ -1.04
PTPN2-208ENST00000589216 MBOAT2Q6ZWT7 520 aa8.57□□□□□ -1.04
PTPN2-208ENST00000589216 HIST3H2AQ7L7L0 130 aa8.57□□□□□ -1.04
PTPN2-208ENST00000589216 ZNF627Q7L945 461 aa8.57□□□□□ -1.04
PTPN2-208ENST00000589216 SYT14Q8NB59 555 aa8.57□□□□□ -1.04
PTPN2-208ENST00000589216 OR51A7Q8NH64 312 aa8.57□□□□□ -1.04
PTPN2-208ENST00000589216 HDAC2Q92769 488 aaKnown RBP8.57□□□□□ -1.04
PTPN2-208ENST00000589216 HIST1H2ACQ93077 130 aa8.57□□□□□ -1.04
PTPN2-208ENST00000589216 ZNF566Q969W8 418 aa8.57□□□□□ -1.04
PTPN2-208ENST00000589216 NMD3Q96D46 503 aaKnown RBP8.57□□□□□ -1.04
PTPN2-208ENST00000589216 FAM46AQ96IP4 442 aaKnown RBP8.57□□□□□ -1.04
PTPN2-208ENST00000589216 DHRS1Q96LJ7 313 aa8.57□□□□□ -1.04
PTPN2-208ENST00000589216 ADAD1Q96M93 576 aaKnown RBP8.57□□□□□ -1.04
PTPN2-208ENST00000589216 TSPAN32Q96QS1 320 aa8.57□□□□□ -1.04
PTPN2-208ENST00000589216 DHRS9Q9BPW9 319 aa8.57□□□□□ -1.04
PTPN2-208ENST00000589216 MRPL13Q9BYD1 178 aaKnown RBP8.57□□□□□ -1.04
PTPN2-208ENST00000589216 GSX1Q9H4S2 264 aaPredicted RBP8.57□□□□□ -1.04
PTPN2-208ENST00000589216 CXorf56Q9H5V9 222 aa8.57□□□□□ -1.04
PTPN2-208ENST00000589216 GORASP2Q9H8Y8 452 aa8.57□□□□□ -1.04
PTPN2-208ENST00000589216 B3GAT2Q9NPZ5 323 aa8.57□□□□□ -1.04
PTPN2-208ENST00000589216 TMEM38BQ9NVV0 291 aa8.57□□□□□ -1.04
PTPN2-208ENST00000589216 B3GNT2Q9NY97 397 aa8.57□□□□□ -1.04
PTPN2-208ENST00000589216 GLTPQ9NZD2 209 aa8.57□□□□□ -1.04
PTPN2-208ENST00000589216 ADAM21Q9UKJ8 722 aa8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms