RNA–Protein interactions for RNA: ENST00000589076.5

SMAD4-207, Transcript of SMAD family member 4, humanhuman

TSL 5

Gene SMAD4, Length 576 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-207ENST00000589076 RFX4Q33E94 735 aa2.27□□□□□ -2.05
SMAD4-207ENST00000589076 VPS26BQ4G0F5 336 aa2.27□□□□□ -2.05
SMAD4-207ENST00000589076 ZNF658BQ4V348 819 aaPredicted RBP2.27□□□□□ -2.05
SMAD4-207ENST00000589076 COA6Q5JTJ3 125 aaKnown RBP2.27□□□□□ -2.05
SMAD4-207ENST00000589076 CYB5R2Q6BCY4 276 aa2.27□□□□□ -2.05
SMAD4-207ENST00000589076 LCN12Q6JVE5 192 aa2.27□□□□□ -2.05
SMAD4-207ENST00000589076 ZNF530Q6P9A1 599 aaPredicted RBP2.27□□□□□ -2.05
SMAD4-207ENST00000589076 TMEM107Q6UX40 140 aa2.27□□□□□ -2.05
SMAD4-207ENST00000589076 CAMK2N1Q7Z7J9 78 aa2.27□□□□□ -2.05
SMAD4-207ENST00000589076 LHFPL3Q86UP9 236 aa2.27□□□□□ -2.05
SMAD4-207ENST00000589076 ZNF429Q86V71 674 aa2.27□□□□□ -2.05
SMAD4-207ENST00000589076 THOC6Q86W42 341 aaKnown RBP2.27□□□□□ -2.05
SMAD4-207ENST00000589076 KIR2DL5AQ8N109 375 aa2.27□□□□□ -2.05
SMAD4-207ENST00000589076 ZADH2Q8N4Q0 377 aa2.27□□□□□ -2.05
SMAD4-207ENST00000589076 Q8N9W7 124 aa2.27□□□□□ -2.05
SMAD4-207ENST00000589076 MDS2Q8NDY4 140 aa2.27□□□□□ -2.05
SMAD4-207ENST00000589076 OR56B2PQ8NGI1 322 aa2.27□□□□□ -2.05
SMAD4-207ENST00000589076 KIR2DL5BQ8NHK3 375 aa2.27□□□□□ -2.05
SMAD4-207ENST00000589076 KCNG3Q8TAE7 436 aa2.27□□□□□ -2.05
SMAD4-207ENST00000589076 GPR151Q8TDV0 419 aa2.27□□□□□ -2.05
SMAD4-207ENST00000589076 PIBF1Q8WXW3 757 aa2.27□□□□□ -2.05
SMAD4-207ENST00000589076 MED8Q96G25 268 aa2.27□□□□□ -2.05
SMAD4-207ENST00000589076 CNDP1Q96KN2 507 aa2.27□□□□□ -2.05
SMAD4-207ENST00000589076 SH3GL3Q99963 347 aa2.27□□□□□ -2.05
SMAD4-207ENST00000589076 CCDC77Q9BR77 488 aa2.27□□□□□ -2.05
SMAD4-207ENST00000589076 ILKAPQ9H0C8 392 aaPredicted RBP2.27□□□□□ -2.05
SMAD4-207ENST00000589076 NMRK1Q9NWW6 199 aa2.27□□□□□ -2.05
SMAD4-207ENST00000589076 PISDQ9UG56 409 aa2.27□□□□□ -2.05
SMAD4-207ENST00000589076 NEU3Q9UQ49 428 aa2.27□□□□□ -2.05
SMAD4-207ENST00000589076 CSDC2Q9Y534 153 aaKnown RBP2.27□□□□□ -2.05
SMAD4-207ENST00000589076 NACAE9PAV3 2078 aa2.27□□□□□ -2.05
SMAD4-207ENST00000589076 LRP4O75096 1905 aa2.27□□□□□ -2.05
SMAD4-207ENST00000589076 PCLOQ9Y6V0 5065 aa2.26□□□□□ -2.05
SMAD4-207ENST00000589076 TRBV6-6A0A0A6YYG2 114 aa2.26□□□□□ -2.05
SMAD4-207ENST00000589076 GOLGA8OA6NCC3 632 aa2.26□□□□□ -2.05
SMAD4-207ENST00000589076 FAM166BA8MTA8 275 aa2.26□□□□□ -2.05
SMAD4-207ENST00000589076 GOLGA8NF8WBI6 632 aa2.26□□□□□ -2.05
SMAD4-207ENST00000589076 PES1O00541 588 aaKnown RBP2.26□□□□□ -2.05
SMAD4-207ENST00000589076 XKRYO14609 159 aa2.26□□□□□ -2.05
SMAD4-207ENST00000589076 CA11O75493 328 aa2.26□□□□□ -2.05
SMAD4-207ENST00000589076 EIF3GO75821 320 aaKnown RBP eCLIP2.26□□□□□ -2.05
SMAD4-207ENST00000589076 PCCAP05165 728 aaPredicted RBP2.26□□□□□ -2.05
SMAD4-207ENST00000589076 CSF3P09919 207 aa2.26□□□□□ -2.05
SMAD4-207ENST00000589076 CT62P0C5K7 136 aa2.26□□□□□ -2.05
SMAD4-207ENST00000589076 SMIM10L1P0DMW3 83 aa2.26□□□□□ -2.05
SMAD4-207ENST00000589076 RPS10P46783 165 aaKnown RBP2.26□□□□□ -2.05
SMAD4-207ENST00000589076 GPX6P59796 221 aa2.26□□□□□ -2.05
SMAD4-207ENST00000589076 AQP6Q13520 282 aa2.26□□□□□ -2.05
SMAD4-207ENST00000589076 IDI1Q13907 227 aa2.26□□□□□ -2.05
SMAD4-207ENST00000589076 TMEM255AQ5JRV8 349 aa2.26□□□□□ -2.05
SMAD4-207ENST00000589076 IGFL2Q6UWQ7 119 aa2.26□□□□□ -2.05
SMAD4-207ENST00000589076 CCDC73Q6ZRK6 1079 aa2.26□□□□□ -2.05
SMAD4-207ENST00000589076 ZNF621Q6ZSS3 439 aa2.26□□□□□ -2.05
SMAD4-207ENST00000589076 PUSL1Q8N0Z8 303 aaKnown RBP2.26□□□□□ -2.05
SMAD4-207ENST00000589076 PLPPR1Q8TBJ4 325 aa2.26□□□□□ -2.05
SMAD4-207ENST00000589076 DTX3LQ8TDB6 740 aa2.26□□□□□ -2.05
SMAD4-207ENST00000589076 RNF139Q8WU17 664 aa2.26□□□□□ -2.05
SMAD4-207ENST00000589076 ZNF799Q96GE5 643 aa2.26□□□□□ -2.05
SMAD4-207ENST00000589076 SMIM10Q96HG1 83 aa2.26□□□□□ -2.05
SMAD4-207ENST00000589076 RARRES2Q99969 163 aa2.26□□□□□ -2.05
SMAD4-207ENST00000589076 CENPKQ9BS16 269 aa2.26□□□□□ -2.05
SMAD4-207ENST00000589076 ZNF226Q9NYT6 803 aa2.26□□□□□ -2.05
SMAD4-207ENST00000589076 STOX2Q9P2F5 926 aaPredicted RBP2.26□□□□□ -2.05
SMAD4-207ENST00000589076 PSMC3IPQ9P2W1 217 aaPredicted RBP2.26□□□□□ -2.05
SMAD4-207ENST00000589076 PCYOX1Q9UHG3 505 aa2.26□□□□□ -2.05
SMAD4-207ENST00000589076 GNPTGQ9UJJ9 305 aa2.26□□□□□ -2.05
SMAD4-207ENST00000589076 STARD10Q9Y365 291 aa2.26□□□□□ -2.05
SMAD4-207ENST00000589076 HEBP2Q9Y5Z4 205 aa2.26□□□□□ -2.05
SMAD4-207ENST00000589076 PIKFYVEQ9Y2I7 2098 aa2.26□□□□□ -2.05
SMAD4-207ENST00000589076 HELZ2Q9BYK8 2649 aaKnown RBP2.25□□□□□ -2.05
SMAD4-207ENST00000589076 USP47Q96K76 1375 aa2.25□□□□□ -2.05
SMAD4-207ENST00000589076 IGKV1D-13A0A0B4J2D9 117 aa2.25□□□□□ -2.05
SMAD4-207ENST00000589076 A0A1B0GVI7 797 aa2.25□□□□□ -2.05
SMAD4-207ENST00000589076 GOSR2O14653 212 aa2.25□□□□□ -2.05
SMAD4-207ENST00000589076 SLC25A27O95847 323 aa2.25□□□□□ -2.05
SMAD4-207ENST00000589076 IGHV3-43DP0DP04 118 aa2.25□□□□□ -2.05
SMAD4-207ENST00000589076 IGKV1-13P0DP09 117 aa2.25□□□□□ -2.05
SMAD4-207ENST00000589076 TOP1P11387 765 aaKnown RBP2.25□□□□□ -2.05
SMAD4-207ENST00000589076 PSG2P11465 335 aa2.25□□□□□ -2.05
SMAD4-207ENST00000589076 ADRB3P13945 408 aa2.25□□□□□ -2.05
SMAD4-207ENST00000589076 GDI1P31150 447 aa2.25□□□□□ -2.05
SMAD4-207ENST00000589076 NMUP48645 174 aa2.25□□□□□ -2.05
SMAD4-207ENST00000589076 FGF8P55075 233 aaPredicted RBP2.25□□□□□ -2.05
SMAD4-207ENST00000589076 ENPEPQ07075 957 aa2.25□□□□□ -2.05
SMAD4-207ENST00000589076 SGCAQ16586 387 aa2.25□□□□□ -2.05
SMAD4-207ENST00000589076 ZBED5Q49AG3 693 aa2.25□□□□□ -2.05
SMAD4-207ENST00000589076 ARIH2OSQ8N7S6 290 aa2.25□□□□□ -2.05
SMAD4-207ENST00000589076 OR7G2Q8NG99 324 aa2.25□□□□□ -2.05
SMAD4-207ENST00000589076 OR51G1Q8NGK1 321 aa2.25□□□□□ -2.05
SMAD4-207ENST00000589076 RAB3IL1Q8TBN0 382 aa2.25□□□□□ -2.05
SMAD4-207ENST00000589076 SDR42E1Q8WUS8 393 aa2.25□□□□□ -2.05
SMAD4-207ENST00000589076 SGK3Q96BR1 496 aa2.25□□□□□ -2.05
SMAD4-207ENST00000589076 AURKBQ96GD4 344 aaPredicted RBP2.25□□□□□ -2.05
SMAD4-207ENST00000589076 RNF185Q96GF1 192 aa2.25□□□□□ -2.05
SMAD4-207ENST00000589076 SDHCQ99643 169 aaPredicted RBP2.25□□□□□ -2.05
SMAD4-207ENST00000589076 NUP58Q9BVL2 599 aa2.25□□□□□ -2.05
SMAD4-207ENST00000589076 OSBPL10Q9BXB5 764 aa2.25□□□□□ -2.05
SMAD4-207ENST00000589076 SLC25A39Q9BZJ4 359 aaPredicted RBP2.25□□□□□ -2.05
SMAD4-207ENST00000589076 GPR61Q9BZJ8 451 aa2.25□□□□□ -2.05
SMAD4-207ENST00000589076 CTPS2Q9NRF8 586 aa2.25□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms