RNA–Protein interactions for RNA: ENST00000585740.5

LIG3-204, Transcript of DNA ligase 3, humanhuman

TSL 3

Gene LIG3, Length 887 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-204ENST00000585740 CHST11Q9NPF2 352 aa10.16□□□□□ -0.78
LIG3-204ENST00000585740 FANCFQ9NPI8 374 aa10.16□□□□□ -0.78
LIG3-204ENST00000585740 ALKBH4Q9NXW9 302 aa10.16□□□□□ -0.78
LIG3-204ENST00000585740 COMMD3Q9UBI1 195 aa10.16□□□□□ -0.78
LIG3-204ENST00000585740 LAMP5Q9UJQ1 280 aa10.16□□□□□ -0.78
LIG3-204ENST00000585740 B9D1Q9UPM9 204 aa10.16□□□□□ -0.78
LIG3-204ENST00000585740 ZNF281Q9Y2X9 895 aa10.16□□□□□ -0.78
LIG3-204ENST00000585740 FRYQ5TBA9 3013 aa10.16□□□□□ -0.78
LIG3-204ENST00000585740 SHISA3A0PJX4 238 aa10.15□□□□□ -0.78
LIG3-204ENST00000585740 C17orf51A8MQB3 221 aa10.15□□□□□ -0.78
LIG3-204ENST00000585740 NPIPA5E9PKD4 350 aa10.15□□□□□ -0.78
LIG3-204ENST00000585740 SEC14L5O43304 696 aa10.15□□□□□ -0.78
LIG3-204ENST00000585740 DLGAP3O95886 979 aa10.15□□□□□ -0.78
LIG3-204ENST00000585740 HNRNPCP07910 306 aaKnown RBP eCLIP10.15□□□□□ -0.78
LIG3-204ENST00000585740 UMODP07911 640 aa10.15□□□□□ -0.78
LIG3-204ENST00000585740 UCHL1P09936 223 aa10.15□□□□□ -0.78
LIG3-204ENST00000585740 TFPIP10646 304 aa10.15□□□□□ -0.78
LIG3-204ENST00000585740 COX6A1P12074 109 aa10.15□□□□□ -0.78
LIG3-204ENST00000585740 ICAM2P13598 275 aa10.15□□□□□ -0.78
LIG3-204ENST00000585740 RAB3BP20337 219 aa10.15□□□□□ -0.78
LIG3-204ENST00000585740 MAPK3P27361 379 aaPredicted RBP10.15□□□□□ -0.78
LIG3-204ENST00000585740 CASP3P42574 277 aa10.15□□□□□ -0.78
LIG3-204ENST00000585740 CAV3P56539 151 aa10.15□□□□□ -0.78
LIG3-204ENST00000585740 DNASE1L3Q13609 305 aa10.15□□□□□ -0.78
LIG3-204ENST00000585740 ALKBH1Q13686 389 aaKnown RBP10.15□□□□□ -0.78
LIG3-204ENST00000585740 ZNF79Q15937 498 aa10.15□□□□□ -0.78
LIG3-204ENST00000585740 CSRP2Q16527 193 aa10.15□□□□□ -0.78
LIG3-204ENST00000585740 PLPPR5Q32ZL2 321 aa10.15□□□□□ -0.78
LIG3-204ENST00000585740 NDUFAF7Q7L592 441 aa10.15□□□□□ -0.78
LIG3-204ENST00000585740 HDDC2Q7Z4H3 204 aa10.15□□□□□ -0.78
LIG3-204ENST00000585740 LSRQ86X29 649 aaPredicted RBP10.15□□□□□ -0.78
LIG3-204ENST00000585740 PM20D2Q8IYS1 436 aa10.15□□□□□ -0.78
LIG3-204ENST00000585740 OR6V1Q8N148 313 aa10.15□□□□□ -0.78
LIG3-204ENST00000585740 RFLNBQ8N5W9 214 aa10.15□□□□□ -0.78
LIG3-204ENST00000585740 YIPF7Q8N8F6 280 aa10.15□□□□□ -0.78
LIG3-204ENST00000585740 ZNF454Q8N9F8 522 aa10.15□□□□□ -0.78
LIG3-204ENST00000585740 FADS6Q8N9I5 356 aa10.15□□□□□ -0.78
LIG3-204ENST00000585740 OR2M3Q8NG83 312 aa10.15□□□□□ -0.78
LIG3-204ENST00000585740 OR10G3Q8NGC4 313 aa10.15□□□□□ -0.78
LIG3-204ENST00000585740 OR6N2Q8NGY6 317 aa10.15□□□□□ -0.78
LIG3-204ENST00000585740 SMAP2Q8WU79 429 aaPredicted RBP10.15□□□□□ -0.78
LIG3-204ENST00000585740 PMEPA1Q969W9 287 aa10.15□□□□□ -0.78
LIG3-204ENST00000585740 ZBTB8AQ96BR9 441 aa10.15□□□□□ -0.78
LIG3-204ENST00000585740 NXPE2Q96DL1 559 aa10.15□□□□□ -0.78
LIG3-204ENST00000585740 TAAR9Q96RI9 348 aa10.15□□□□□ -0.78
LIG3-204ENST00000585740 UBL7Q96S82 380 aaPredicted RBP10.15□□□□□ -0.78
LIG3-204ENST00000585740 SOSTQ9BQB4 213 aa10.15□□□□□ -0.78
LIG3-204ENST00000585740 OR11A1Q9GZK7 315 aa10.15□□□□□ -0.78
LIG3-204ENST00000585740 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP10.15□□□□□ -0.78
LIG3-204ENST00000585740 SYT4Q9H2B2 425 aa10.15□□□□□ -0.78
LIG3-204ENST00000585740 GALNT9Q9HCQ5 603 aa10.15□□□□□ -0.78
LIG3-204ENST00000585740 ACOXLQ9NUZ1 547 aa10.15□□□□□ -0.78
LIG3-204ENST00000585740 RHBDL2Q9NX52 303 aa10.15□□□□□ -0.78
LIG3-204ENST00000585740 ABRACLQ9P1F3 81 aa10.15□□□□□ -0.78
LIG3-204ENST00000585740 RABL2AQ9UBK7 228 aaPredicted RBP10.15□□□□□ -0.78
LIG3-204ENST00000585740 TEKT2Q9UIF3 430 aa10.15□□□□□ -0.78
LIG3-204ENST00000585740 NPIPA1Q9UND3 350 aa10.15□□□□□ -0.78
LIG3-204ENST00000585740 RABL2BQ9UNT1 228 aa10.15□□□□□ -0.78
LIG3-204ENST00000585740 B3GALT5Q9Y2C3 310 aa10.15□□□□□ -0.78
LIG3-204ENST00000585740 GRIP1Q9Y3R0 1128 aa10.15□□□□□ -0.78
LIG3-204ENST00000585740 LOXL2Q9Y4K0 774 aa10.15□□□□□ -0.78
LIG3-204ENST00000585740 PKD1L2Q7Z442 2459 aa10.15□□□□□ -0.78
LIG3-204ENST00000585740 NSG1A0A0A6YYJ2 146 aa10.14□□□□□ -0.79
LIG3-204ENST00000585740 A0A1W2PNV4 684 aa10.14□□□□□ -0.79
LIG3-204ENST00000585740 LIPT2A6NK58 231 aa10.14□□□□□ -0.79
LIG3-204ENST00000585740 NOTOA8MTQ0 251 aa10.14□□□□□ -0.79
LIG3-204ENST00000585740 FAM171A2A8MVW0 826 aa10.14□□□□□ -0.79
LIG3-204ENST00000585740 FAM25AB3EWG3 89 aa10.14□□□□□ -0.79
LIG3-204ENST00000585740 FAM25CB3EWG5 89 aa10.14□□□□□ -0.79
LIG3-204ENST00000585740 FAM25GB3EWG6 89 aa10.14□□□□□ -0.79
LIG3-204ENST00000585740 HPGDSO60760 199 aa10.14□□□□□ -0.79
LIG3-204ENST00000585740 ITGA10O75578 1167 aa10.14□□□□□ -0.79
LIG3-204ENST00000585740 KLF7O75840 302 aaPredicted RBP10.14□□□□□ -0.79
LIG3-204ENST00000585740 IL7P13232 177 aa10.14□□□□□ -0.79
LIG3-204ENST00000585740 ALOX5APP20292 161 aa10.14□□□□□ -0.79
LIG3-204ENST00000585740 APEX1P27695 318 aaKnown RBP10.14□□□□□ -0.79
LIG3-204ENST00000585740 TALDO1P37837 337 aa10.14□□□□□ -0.79
LIG3-204ENST00000585740 EVX1P49640 407 aa10.14□□□□□ -0.79
LIG3-204ENST00000585740 SSR4P51571 173 aa10.14□□□□□ -0.79
LIG3-204ENST00000585740 SELENBP1Q13228 472 aa10.14□□□□□ -0.79
LIG3-204ENST00000585740 INSL4Q14641 139 aa10.14□□□□□ -0.79
LIG3-204ENST00000585740 OR7A5Q15622 319 aa10.14□□□□□ -0.79
LIG3-204ENST00000585740 HSD17B12Q53GQ0 312 aa10.14□□□□□ -0.79
LIG3-204ENST00000585740 PYDC2Q56P42 97 aa10.14□□□□□ -0.79
LIG3-204ENST00000585740 PLA2G2CQ5R387 149 aa10.14□□□□□ -0.79
LIG3-204ENST00000585740 IDNKQ5T6J7 187 aa10.14□□□□□ -0.79
LIG3-204ENST00000585740 OR5M10Q6IEU7 315 aa10.14□□□□□ -0.79
LIG3-204ENST00000585740 SLC18B1Q6NT16 456 aa10.14□□□□□ -0.79
LIG3-204ENST00000585740 C3orf33Q6P1S2 294 aa10.14□□□□□ -0.79
LIG3-204ENST00000585740 SFXN4Q6P4A7 337 aa10.14□□□□□ -0.79
LIG3-204ENST00000585740 FAM199XQ6PEV8 388 aaPredicted RBP10.14□□□□□ -0.79
LIG3-204ENST00000585740 CNIH2Q6PI25 160 aa10.14□□□□□ -0.79
LIG3-204ENST00000585740 ARSKQ6UWY0 536 aa10.14□□□□□ -0.79
LIG3-204ENST00000585740 C6orf15Q6UXA7 325 aaPredicted RBP10.14□□□□□ -0.79
LIG3-204ENST00000585740 RPTNQ6XPR3 784 aa10.14□□□□□ -0.79
LIG3-204ENST00000585740 LRRC28Q86X40 367 aaPredicted RBP10.14□□□□□ -0.79
LIG3-204ENST00000585740 DRAXINQ8NBI3 349 aaPredicted RBP10.14□□□□□ -0.79
LIG3-204ENST00000585740 SNRNP27Q8WVK2 155 aaKnown RBP10.14□□□□□ -0.79
LIG3-204ENST00000585740 ASB10Q8WXI3 467 aa10.14□□□□□ -0.79
LIG3-204ENST00000585740 C5orf34Q96MH7 638 aa10.14□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms