RNA–Protein interactions for RNA: ENST00000584655.5

RFFL-212, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 2 BASIC

Gene RFFL, Length 4,039 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-212ENST00000584655 CRELD1Q96HD1 420 aa9.28□□□□□ -0.92
RFFL-212ENST00000584655 TSPAN32Q96QS1 320 aa9.28□□□□□ -0.92
RFFL-212ENST00000584655 PRRG4Q9BZD6 226 aa9.28□□□□□ -0.92
RFFL-212ENST00000584655 TBCCD1Q9NVR7 557 aa9.28□□□□□ -0.92
RFFL-212ENST00000584655 CDV3Q9UKY7 258 aaKnown RBP9.28□□□□□ -0.92
RFFL-212ENST00000584655 CFL2Q9Y281 166 aa9.28□□□□□ -0.92
RFFL-212ENST00000584655 ZNF337Q9Y3M9 751 aa9.28□□□□□ -0.92
RFFL-212ENST00000584655 B4DXG7 233 aa9.28□□□□□ -0.92
RFFL-212ENST00000584655 IL33O95760 270 aa9.28□□□□□ -0.92
RFFL-212ENST00000584655 CCL2P13500 99 aa9.28□□□□□ -0.92
RFFL-212ENST00000584655 EDN3P14138 238 aa9.28□□□□□ -0.92
RFFL-212ENST00000584655 GBX2P52951 348 aaPredicted RBP9.28□□□□□ -0.92
RFFL-212ENST00000584655 SNRPGP62308 76 aaKnown RBP9.28□□□□□ -0.92
RFFL-212ENST00000584655 PMP22Q01453 160 aa9.28□□□□□ -0.92
RFFL-212ENST00000584655 EIF2B1Q14232 305 aaKnown RBP9.28□□□□□ -0.92
RFFL-212ENST00000584655 CEP78Q5JTW2 689 aa9.28□□□□□ -0.92
RFFL-212ENST00000584655 HES3Q5TGS1 186 aa9.28□□□□□ -0.92
RFFL-212ENST00000584655 MEDAGQ5VYS4 303 aa9.28□□□□□ -0.92
RFFL-212ENST00000584655 ZNF613Q6PF04 617 aa9.28□□□□□ -0.92
RFFL-212ENST00000584655 OVCH1Q7RTY7 1134 aa9.28□□□□□ -0.92
RFFL-212ENST00000584655 ADGRG3Q86Y34 549 aa9.28□□□□□ -0.92
RFFL-212ENST00000584655 DEFB127Q9H1M4 99 aa9.28□□□□□ -0.92
RFFL-212ENST00000584655 DIMT1Q9UNQ2 313 aaKnown RBP9.28□□□□□ -0.92
RFFL-212ENST00000584655 EPG5Q9HCE0 2579 aa9.28□□□□□ -0.92
RFFL-212ENST00000584655 A0A096LPE4 126 aa9.28□□□□□ -0.92
RFFL-212ENST00000584655 LOC101059948A0A1B0GTJ6 334 aa9.28□□□□□ -0.92
RFFL-212ENST00000584655 A0A1W2PPZ6 126 aa9.28□□□□□ -0.92
RFFL-212ENST00000584655 METTL15A6NJ78 407 aa9.28□□□□□ -0.92
RFFL-212ENST00000584655 ZNF814B7Z6K7 855 aa9.28□□□□□ -0.92
RFFL-212ENST00000584655 TNFSF11O14788 317 aa9.28□□□□□ -0.92
RFFL-212ENST00000584655 TOXO94900 526 aa9.28□□□□□ -0.92
RFFL-212ENST00000584655 ITGB2P05107 769 aa9.28□□□□□ -0.92
RFFL-212ENST00000584655 PNLIPP16233 465 aa9.28□□□□□ -0.92
RFFL-212ENST00000584655 GDF1P27539 372 aa9.28□□□□□ -0.92
RFFL-212ENST00000584655 CLDN17P56750 224 aa9.28□□□□□ -0.92
RFFL-212ENST00000584655 PLGLB1Q02325 96 aa9.28□□□□□ -0.92
RFFL-212ENST00000584655 PRKCDQ05655 676 aa9.28□□□□□ -0.92
RFFL-212ENST00000584655 CBFBQ13951 182 aa9.28□□□□□ -0.92
RFFL-212ENST00000584655 ALKBH3Q96Q83 286 aaPredicted RBP9.28□□□□□ -0.92
RFFL-212ENST00000584655 ZNF768Q9H5H4 540 aaKnown RBP9.28□□□□□ -0.92
RFFL-212ENST00000584655 B9D1Q9UPM9 204 aa9.28□□□□□ -0.92
RFFL-212ENST00000584655 AK1P00568 194 aa9.28□□□□□ -0.92
RFFL-212ENST00000584655 HLA-DPB1P04440 258 aa9.28□□□□□ -0.92
RFFL-212ENST00000584655 CD14P08571 375 aa9.28□□□□□ -0.92
RFFL-212ENST00000584655 MESTQ5EB52 335 aa9.28□□□□□ -0.92
RFFL-212ENST00000584655 ARHGAP11AQ6P4F7 1023 aa9.28□□□□□ -0.92
RFFL-212ENST00000584655 Q8N402 240 aa9.28□□□□□ -0.92
RFFL-212ENST00000584655 ABHD4Q8TB40 342 aa9.28□□□□□ -0.92
RFFL-212ENST00000584655 ENKURQ8TC29 256 aa9.28□□□□□ -0.92
RFFL-212ENST00000584655 PELI1Q96FA3 418 aa9.28□□□□□ -0.92
RFFL-212ENST00000584655 MSANTD3Q96H12 275 aa9.28□□□□□ -0.92
RFFL-212ENST00000584655 ADGRL4Q9HBW9 690 aa9.28□□□□□ -0.92
RFFL-212ENST00000584655 SLCO1C1Q9NYB5 712 aa9.28□□□□□ -0.92
RFFL-212ENST00000584655 TMEM131Q92545 1883 aa9.27□□□□□ -0.92
RFFL-212ENST00000584655 ZNF106Q9H2Y7 1883 aaKnown RBP9.27□□□□□ -0.92
RFFL-212ENST00000584655 MUC22E2RYF6 1773 aaPredicted RBP9.27□□□□□ -0.93
RFFL-212ENST00000584655 TRABD2BA6NFA1 517 aa9.27□□□□□ -0.93
RFFL-212ENST00000584655 ADRB1P08588 477 aa9.27□□□□□ -0.93
RFFL-212ENST00000584655 RFPL3SP0C7P2 107 aa9.27□□□□□ -0.93
RFFL-212ENST00000584655 CLDN20P56880 219 aa9.27□□□□□ -0.93
RFFL-212ENST00000584655 NANOS3P60323 173 aaKnown RBP9.27□□□□□ -0.93
RFFL-212ENST00000584655 RPS15P62841 145 aaKnown RBP9.27□□□□□ -0.93
RFFL-212ENST00000584655 TUBA1BP68363 451 aa9.27□□□□□ -0.93
RFFL-212ENST00000584655 MYBPHQ13203 477 aa9.27□□□□□ -0.93
RFFL-212ENST00000584655 PDCD1Q15116 288 aa9.27□□□□□ -0.93
RFFL-212ENST00000584655 TUBA1AQ71U36 451 aa9.27□□□□□ -0.93
RFFL-212ENST00000584655 TRMT10AQ8TBZ6 339 aaKnown RBP9.27□□□□□ -0.93
RFFL-212ENST00000584655 CHPT1Q8WUD6 406 aa9.27□□□□□ -0.93
RFFL-212ENST00000584655 SOX7Q9BT81 388 aa9.27□□□□□ -0.93
RFFL-212ENST00000584655 TCF7L1Q9HCS4 588 aa9.27□□□□□ -0.93
RFFL-212ENST00000584655 TMEM5Q9Y2B1 443 aa9.27□□□□□ -0.93
RFFL-212ENST00000584655 HS3ST3B1Q9Y662 390 aa9.27□□□□□ -0.93
RFFL-212ENST00000584655 CLPSP04118 112 aa9.27□□□□□ -0.93
RFFL-212ENST00000584655 IGKV3-11P04433 115 aa9.27□□□□□ -0.93
RFFL-212ENST00000584655 CELA3AP09093 270 aa9.27□□□□□ -0.93
RFFL-212ENST00000584655 ZNF85Q03923 595 aa9.27□□□□□ -0.93
RFFL-212ENST00000584655 CEBPEQ15744 281 aa9.27□□□□□ -0.93
RFFL-212ENST00000584655 TMEM164Q5U3C3 297 aa9.27□□□□□ -0.93
RFFL-212ENST00000584655 MAMDC2Q7Z304 686 aaPredicted RBP9.27□□□□□ -0.93
RFFL-212ENST00000584655 DCXRQ7Z4W1 244 aa9.27□□□□□ -0.93
RFFL-212ENST00000584655 CHST4Q8NCG5 386 aa9.27□□□□□ -0.93
RFFL-212ENST00000584655 OR11G2Q8NGC1 345 aa9.27□□□□□ -0.93
RFFL-212ENST00000584655 C9orf43Q8TAL5 461 aaPredicted RBP9.27□□□□□ -0.93
RFFL-212ENST00000584655 PCNPQ8WW12 178 aaKnown RBP9.27□□□□□ -0.93
RFFL-212ENST00000584655 CHIAQ9BZP6 476 aa9.27□□□□□ -0.93
RFFL-212ENST00000584655 TP63Q9H3D4 680 aaPredicted RBP9.27□□□□□ -0.93
RFFL-212ENST00000584655 C12orf49Q9H741 205 aa9.27□□□□□ -0.93
RFFL-212ENST00000584655 SDHAF3Q9NRP4 125 aa9.27□□□□□ -0.93
RFFL-212ENST00000584655 P4HTMQ9NXG6 502 aa9.27□□□□□ -0.93
RFFL-212ENST00000584655 DENND4AQ7Z401 1863 aa9.27□□□□□ -0.93
RFFL-212ENST00000584655 FAM240BA0A1B0GVZ2 78 aa9.27□□□□□ -0.93
RFFL-212ENST00000584655 ZNF726A6NNF4 738 aa9.27□□□□□ -0.93
RFFL-212ENST00000584655 P2RY10O00398 339 aa9.27□□□□□ -0.93
RFFL-212ENST00000584655 ZFPL1O95159 310 aa9.27□□□□□ -0.93
RFFL-212ENST00000584655 TALDO1P37837 337 aa9.27□□□□□ -0.93
RFFL-212ENST00000584655 CLRN1P58418 232 aa9.27□□□□□ -0.93
RFFL-212ENST00000584655 COL19A1Q14993 1142 aa9.27□□□□□ -0.93
RFFL-212ENST00000584655 FAM219AQ8IW50 185 aa9.27□□□□□ -0.93
RFFL-212ENST00000584655 S100ZQ8WXG8 99 aa9.27□□□□□ -0.93
RFFL-212ENST00000584655 TMEM106AQ96A25 262 aa9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms