RNA–Protein interactions for RNA: ENST00000580299.1

CTC1-207, Transcript of CST telomere replication complex component 1, humanhuman

APPRIS ALT2 TSL 5

Gene CTC1, Length 375 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1-207ENST00000580299 EGLN3Q9H6Z9 239 aa1.89□□□□□ -2.11
CTC1-207ENST00000580299 DDX31Q9H8H2 851 aaKnown RBP1.89□□□□□ -2.11
CTC1-207ENST00000580299 C10orf88Q9H8K7 445 aa1.89□□□□□ -2.11
CTC1-207ENST00000580299 SEBOXQ9HB31 216 aaPredicted RBP1.89□□□□□ -2.11
CTC1-207ENST00000580299 B3GAT2Q9NPZ5 323 aa1.89□□□□□ -2.11
CTC1-207ENST00000580299 TRIM36Q9NQ86 728 aa1.89□□□□□ -2.11
CTC1-207ENST00000580299 FBXO6Q9NRD1 293 aaPredicted RBP1.89□□□□□ -2.11
CTC1-207ENST00000580299 CHRAC1Q9NRG0 131 aa1.89□□□□□ -2.11
CTC1-207ENST00000580299 UBQLN4Q9NRR5 601 aa1.89□□□□□ -2.11
CTC1-207ENST00000580299 SIGLEC8Q9NYZ4 499 aa1.89□□□□□ -2.11
CTC1-207ENST00000580299 AHSPQ9NZD4 102 aa1.89□□□□□ -2.11
CTC1-207ENST00000580299 BFARQ9NZS9 450 aa1.89□□□□□ -2.11
CTC1-207ENST00000580299 TMEM181Q9P2C4 612 aa1.89□□□□□ -2.11
CTC1-207ENST00000580299 SCOCQ9UIL1 159 aa1.89□□□□□ -2.11
CTC1-207ENST00000580299 ZNF490Q9ULM2 529 aaPredicted RBP1.89□□□□□ -2.11
CTC1-207ENST00000580299 NFU1Q9UMS0 254 aa1.89□□□□□ -2.11
CTC1-207ENST00000580299 SBDSQ9Y3A5 250 aaKnown RBP eCLIP1.89□□□□□ -2.11
CTC1-207ENST00000580299 ATP6V1DQ9Y5K8 247 aa1.89□□□□□ -2.11
CTC1-207ENST00000580299 VPS13BQ7Z7G8 4022 aa1.88□□□□□ -2.11
CTC1-207ENST00000580299 IGLV1-36A0A0B4J1U3 117 aa1.88□□□□□ -2.11
CTC1-207ENST00000580299 IQCMA0A1B0GVH7 501 aa1.88□□□□□ -2.11
CTC1-207ENST00000580299 FAM95CA0A1B0GW59 222 aa1.88□□□□□ -2.11
CTC1-207ENST00000580299 PSMB11A5LHX3 300 aa1.88□□□□□ -2.11
CTC1-207ENST00000580299 ZSCAN5BA6NJL1 495 aa1.88□□□□□ -2.11
CTC1-207ENST00000580299 A6NLC8 198 aa1.88□□□□□ -2.11
CTC1-207ENST00000580299 ZNF99A8MXY4 864 aaPredicted RBP1.88□□□□□ -2.11
CTC1-207ENST00000580299 H3BSH0 61 aa1.88□□□□□ -2.11
CTC1-207ENST00000580299 MANBAO00462 879 aa1.88□□□□□ -2.11
CTC1-207ENST00000580299 ZNF264O43296 627 aa1.88□□□□□ -2.11
CTC1-207ENST00000580299 PSTPIP1O43586 416 aa1.88□□□□□ -2.11
CTC1-207ENST00000580299 EFNA2O43921 213 aa1.88□□□□□ -2.11
CTC1-207ENST00000580299 PLOD3O60568 738 aa1.88□□□□□ -2.11
CTC1-207ENST00000580299 SLC43A1O75387 559 aa1.88□□□□□ -2.11
CTC1-207ENST00000580299 CRCPO75575 148 aa1.88□□□□□ -2.11
CTC1-207ENST00000580299 GLCEO94923 617 aa1.88□□□□□ -2.11
CTC1-207ENST00000580299 SEMA3DO95025 777 aa1.88□□□□□ -2.11
CTC1-207ENST00000580299 NDUFB8O95169 186 aa1.88□□□□□ -2.11
CTC1-207ENST00000580299 VAMP5O95183 116 aa1.88□□□□□ -2.11
CTC1-207ENST00000580299 FSTL3O95633 263 aa1.88□□□□□ -2.11
CTC1-207ENST00000580299 HLA-HP01893 362 aa1.88□□□□□ -2.11
CTC1-207ENST00000580299 IGF1P05019 195 aa1.88□□□□□ -2.11
CTC1-207ENST00000580299 SERPINA5P05154 406 aa1.88□□□□□ -2.11
CTC1-207ENST00000580299 APRTP07741 180 aa1.88□□□□□ -2.11
CTC1-207ENST00000580299 GSTP1P09211 210 aaKnown RBP1.88□□□□□ -2.11
CTC1-207ENST00000580299 SPARCP09486 303 aa1.88□□□□□ -2.11
CTC1-207ENST00000580299 G6PDP11413 515 aa1.88□□□□□ -2.11
CTC1-207ENST00000580299 ARSBP15848 533 aa1.88□□□□□ -2.11
CTC1-207ENST00000580299 SPNP16150 400 aa1.88□□□□□ -2.11
CTC1-207ENST00000580299 ATP6V1C1P21283 382 aa1.88□□□□□ -2.11
CTC1-207ENST00000580299 AZGP1P25311 298 aaKnown RBP1.88□□□□□ -2.11
CTC1-207ENST00000580299 IVDP26440 423 aa1.88□□□□□ -2.11
CTC1-207ENST00000580299 NMBRP28336 390 aa1.88□□□□□ -2.11
CTC1-207ENST00000580299 GABRA3P34903 492 aa1.88□□□□□ -2.11
CTC1-207ENST00000580299 MPIP34949 423 aa1.88□□□□□ -2.11
CTC1-207ENST00000580299 BSGP35613 385 aa1.88□□□□□ -2.11
CTC1-207ENST00000580299 APOBEC1P41238 236 aaKnown RBP1.88□□□□□ -2.11
CTC1-207ENST00000580299 CCNG1P51959 295 aa1.88□□□□□ -2.11
CTC1-207ENST00000580299 UBE2E1P51965 193 aa1.88□□□□□ -2.11
CTC1-207ENST00000580299 MVDP53602 400 aa1.88□□□□□ -2.11
CTC1-207ENST00000580299 TERF1P54274 439 aa1.88□□□□□ -2.11
CTC1-207ENST00000580299 UCP2P55851 309 aa1.88□□□□□ -2.11
CTC1-207ENST00000580299 LGALS4P56470 323 aa1.88□□□□□ -2.11
CTC1-207ENST00000580299 RAB1AP62820 205 aa1.88□□□□□ -2.11
CTC1-207ENST00000580299 RPS26P62854 115 aaKnown RBP1.88□□□□□ -2.11
CTC1-207ENST00000580299 SLC35B1P78383 322 aa1.88□□□□□ -2.11
CTC1-207ENST00000580299 ZBED6P86452 979 aa1.88□□□□□ -2.11
CTC1-207ENST00000580299 UBXN1Q04323 297 aa1.88□□□□□ -2.11
CTC1-207ENST00000580299 PIGFQ07326 219 aa1.88□□□□□ -2.11
CTC1-207ENST00000580299 IKZF1Q13422 519 aa1.88□□□□□ -2.11
CTC1-207ENST00000580299 CUL3Q13618 768 aa1.88□□□□□ -2.11
CTC1-207ENST00000580299 SLC17A1Q14916 467 aa1.88□□□□□ -2.11
CTC1-207ENST00000580299 QPRTQ15274 297 aa1.88□□□□□ -2.11
CTC1-207ENST00000580299 RABL3Q5HYI8 236 aa1.88□□□□□ -2.11
CTC1-207ENST00000580299 TEX35Q5T0J7 233 aa1.88□□□□□ -2.11
CTC1-207ENST00000580299 CCNYL2Q5T2Q4 361 aa1.88□□□□□ -2.11
CTC1-207ENST00000580299 E4F1Q66K89 784 aaPredicted RBP1.88□□□□□ -2.11
CTC1-207ENST00000580299 TMEM225Q6GV28 225 aa1.88□□□□□ -2.11
CTC1-207ENST00000580299 FAM45BPQ6NSW5 357 aa1.88□□□□□ -2.11
CTC1-207ENST00000580299 CDPF1Q6NVV7 123 aa1.88□□□□□ -2.11
CTC1-207ENST00000580299 TMEM53Q6P2H8 277 aa1.88□□□□□ -2.11
CTC1-207ENST00000580299 NIPAL3Q6P499 406 aa1.88□□□□□ -2.11
CTC1-207ENST00000580299 CRIP3Q6Q6R5 217 aa1.88□□□□□ -2.11
CTC1-207ENST00000580299 PAQR3Q6TCH7 311 aa1.88□□□□□ -2.11
CTC1-207ENST00000580299 APOOLQ6UXV4 268 aa1.88□□□□□ -2.11
CTC1-207ENST00000580299 OR2W3Q7Z3T1 314 aa1.88□□□□□ -2.11
CTC1-207ENST00000580299 ZAR1Q86SH2 424 aa1.88□□□□□ -2.11
CTC1-207ENST00000580299 RNF130Q86XS8 419 aa1.88□□□□□ -2.11
CTC1-207ENST00000580299 EPHX4Q8IUS5 362 aa1.88□□□□□ -2.11
CTC1-207ENST00000580299 CCDC103Q8IW40 242 aa1.88□□□□□ -2.11
CTC1-207ENST00000580299 KLHL7Q8IXQ5 586 aa1.88□□□□□ -2.11
CTC1-207ENST00000580299 LAS2Q8IYD9 372 aa1.88□□□□□ -2.11
CTC1-207ENST00000580299 COMMD1Q8N668 190 aa1.88□□□□□ -2.11
CTC1-207ENST00000580299 TMEM217Q8N7C4 229 aa1.88□□□□□ -2.11
CTC1-207ENST00000580299 ZNF614Q8N883 585 aa1.88□□□□□ -2.11
CTC1-207ENST00000580299 FAM71DQ8N9W8 422 aa1.88□□□□□ -2.11
CTC1-207ENST00000580299 PIK3C3Q8NEB9 887 aa1.88□□□□□ -2.11
CTC1-207ENST00000580299 SLC30A7Q8NEW0 376 aa1.88□□□□□ -2.11
CTC1-207ENST00000580299 OR2Z1Q8NG97 314 aa1.88□□□□□ -2.11
CTC1-207ENST00000580299 OR7A2PQ8NGA2 310 aa1.88□□□□□ -2.11
CTC1-207ENST00000580299 OR9A2Q8NGT5 310 aa1.88□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms