RNA–Protein interactions for RNA: ENST00000580287.5

CDK5RAP3-217, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 1 (best)

Gene CDK5RAP3, Length 2,609 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-217ENST00000580287 LINC00696Q6ZRV3 163 aa11.45□□□□□ -0.58
CDK5RAP3-217ENST00000580287 RFPL4BQ6ZWI9 263 aa11.45□□□□□ -0.58
CDK5RAP3-217ENST00000580287 ZNF440Q8IYI8 595 aa11.45□□□□□ -0.58
CDK5RAP3-217ENST00000580287 DNAJA4Q8WW22 397 aaPredicted RBP11.45□□□□□ -0.58
CDK5RAP3-217ENST00000580287 TTC9Q92623 222 aa11.45□□□□□ -0.58
CDK5RAP3-217ENST00000580287 SGTBQ96EQ0 304 aa11.45□□□□□ -0.58
CDK5RAP3-217ENST00000580287 CCDC86Q9H6F5 360 aaKnown RBP11.45□□□□□ -0.58
CDK5RAP3-217ENST00000580287 PROK2Q9HC23 129 aa11.45□□□□□ -0.58
CDK5RAP3-217ENST00000580287 RANGRFQ9HD47 186 aaPredicted RBP11.45□□□□□ -0.58
CDK5RAP3-217ENST00000580287 HPF1Q9NWY4 346 aa11.45□□□□□ -0.58
CDK5RAP3-217ENST00000580287 PPP4R1LQ9P1A2 415 aa11.45□□□□□ -0.58
CDK5RAP3-217ENST00000580287 KLK13Q9UKR3 277 aa11.45□□□□□ -0.58
CDK5RAP3-217ENST00000580287 ADAM18Q9Y3Q7 739 aa11.45□□□□□ -0.58
CDK5RAP3-217ENST00000580287 IER3IP1Q9Y5U9 82 aa11.45□□□□□ -0.58
CDK5RAP3-217ENST00000580287 DOCK10Q96BY6 2186 aa11.45□□□□□ -0.58
CDK5RAP3-217ENST00000580287 PTPRBP23467 1997 aa11.45□□□□□ -0.58
CDK5RAP3-217ENST00000580287 EIF4E2O60573 245 aaKnown RBP11.45□□□□□ -0.58
CDK5RAP3-217ENST00000580287 IFNGP01579 166 aa11.45□□□□□ -0.58
CDK5RAP3-217ENST00000580287 HLA-DPB1P04440 258 aa11.45□□□□□ -0.58
CDK5RAP3-217ENST00000580287 TRAPPC2P0DI81 140 aa11.45□□□□□ -0.58
CDK5RAP3-217ENST00000580287 TRAPPC2BP0DI82 140 aa11.45□□□□□ -0.58
CDK5RAP3-217ENST00000580287 PEPDP12955 493 aa11.45□□□□□ -0.58
CDK5RAP3-217ENST00000580287 ICAM2P13598 275 aa11.45□□□□□ -0.58
CDK5RAP3-217ENST00000580287 LCN1P31025 176 aa11.45□□□□□ -0.58
CDK5RAP3-217ENST00000580287 RPS5P46782 204 aaKnown RBP11.45□□□□□ -0.58
CDK5RAP3-217ENST00000580287 OC90Q02509 493 aaPredicted RBP11.45□□□□□ -0.58
CDK5RAP3-217ENST00000580287 LTBQ06643 244 aa11.45□□□□□ -0.58
CDK5RAP3-217ENST00000580287 FOXC1Q12948 553 aa11.45□□□□□ -0.58
CDK5RAP3-217ENST00000580287 CBFBQ13951 182 aa11.45□□□□□ -0.58
CDK5RAP3-217ENST00000580287 C21orf62-AS1Q17RA5 79 aa11.45□□□□□ -0.58
CDK5RAP3-217ENST00000580287 ZSWIM7Q19AV6 140 aa11.45□□□□□ -0.58
CDK5RAP3-217ENST00000580287 VASNQ6EMK4 673 aa11.45□□□□□ -0.58
CDK5RAP3-217ENST00000580287 NOXA1Q86UR1 476 aa11.45□□□□□ -0.58
CDK5RAP3-217ENST00000580287 ZNF485Q8NCK3 441 aa11.45□□□□□ -0.58
CDK5RAP3-217ENST00000580287 OR52N1Q8NH53 320 aa11.45□□□□□ -0.58
CDK5RAP3-217ENST00000580287 NEIL3Q8TAT5 605 aa11.45□□□□□ -0.58
CDK5RAP3-217ENST00000580287 SLC7A6Q92536 515 aa11.45□□□□□ -0.58
CDK5RAP3-217ENST00000580287 FYTTD1Q96QD9 318 aaKnown RBP11.45□□□□□ -0.58
CDK5RAP3-217ENST00000580287 ZNF649Q9BS31 505 aa11.45□□□□□ -0.58
CDK5RAP3-217ENST00000580287 ADAM19Q9H013 955 aa11.45□□□□□ -0.58
CDK5RAP3-217ENST00000580287 PPIL3Q9H2H8 161 aaKnown RBP11.45□□□□□ -0.58
CDK5RAP3-217ENST00000580287 ISYNA1Q9NPH2 558 aa11.45□□□□□ -0.58
CDK5RAP3-217ENST00000580287 KLHL1Q9NR64 748 aa11.45□□□□□ -0.58
CDK5RAP3-217ENST00000580287 TAS2R10Q9NYW0 307 aa11.45□□□□□ -0.58
CDK5RAP3-217ENST00000580287 WIF1Q9Y5W5 379 aa11.45□□□□□ -0.58
CDK5RAP3-217ENST00000580287 EML6Q6ZMW3 1958 aa11.45□□□□□ -0.58
CDK5RAP3-217ENST00000580287 ARGFXA6NJG6 315 aa11.44□□□□□ -0.58
CDK5RAP3-217ENST00000580287 MCIDASD6RGH6 385 aa11.44□□□□□ -0.58
CDK5RAP3-217ENST00000580287 J3QLW9 94 aa11.44□□□□□ -0.58
CDK5RAP3-217ENST00000580287 GABRPO00591 440 aa11.44□□□□□ -0.58
CDK5RAP3-217ENST00000580287 ZNF19P17023 458 aa11.44□□□□□ -0.58
CDK5RAP3-217ENST00000580287 PGCP20142 388 aa11.44□□□□□ -0.58
CDK5RAP3-217ENST00000580287 FHL1Q13642 323 aa11.44□□□□□ -0.58
CDK5RAP3-217ENST00000580287 GLYR1Q49A26 553 aaPredicted RBP11.44□□□□□ -0.58
CDK5RAP3-217ENST00000580287 ARL9Q6T311 187 aa11.44□□□□□ -0.58
CDK5RAP3-217ENST00000580287 OPN5Q6U736 354 aa11.44□□□□□ -0.58
CDK5RAP3-217ENST00000580287 RPTNQ6XPR3 784 aa11.44□□□□□ -0.58
CDK5RAP3-217ENST00000580287 NR2C2APQ86WQ0 139 aa11.44□□□□□ -0.58
CDK5RAP3-217ENST00000580287 ZNF227Q86WZ6 799 aa11.44□□□□□ -0.58
CDK5RAP3-217ENST00000580287 ZMYND19Q96E35 227 aaPredicted RBP11.44□□□□□ -0.58
CDK5RAP3-217ENST00000580287 TMEM185BQ9H7F4 350 aa11.44□□□□□ -0.58
CDK5RAP3-217ENST00000580287 NUFIP1Q9UHK0 495 aaKnown RBP11.44□□□□□ -0.58
CDK5RAP3-217ENST00000580287 RPH3AQ9Y2J0 694 aaPredicted RBP11.44□□□□□ -0.58
CDK5RAP3-217ENST00000580287 ATMQ13315 3056 aa11.44□□□□□ -0.58
CDK5RAP3-217ENST00000580287 MPDZO75970 2070 aa11.44□□□□□ -0.58
CDK5RAP3-217ENST00000580287 APC2O95996 2303 aa11.44□□□□□ -0.58
CDK5RAP3-217ENST00000580287 A0A0B4J293 547 aa11.44□□□□□ -0.58
CDK5RAP3-217ENST00000580287 FAM25AB3EWG3 89 aa11.44□□□□□ -0.58
CDK5RAP3-217ENST00000580287 FAM25CB3EWG5 89 aa11.44□□□□□ -0.58
CDK5RAP3-217ENST00000580287 FAM25GB3EWG6 89 aa11.44□□□□□ -0.58
CDK5RAP3-217ENST00000580287 E9PI62 339 aa11.44□□□□□ -0.58
CDK5RAP3-217ENST00000580287 BLOC1S5-TXNDC5H3BN57 136 aa11.44□□□□□ -0.58
CDK5RAP3-217ENST00000580287 NDUFB2O95178 105 aa11.44□□□□□ -0.58
CDK5RAP3-217ENST00000580287 YES1P07947 543 aa11.44□□□□□ -0.58
CDK5RAP3-217ENST00000580287 GP1BBP13224 206 aa11.44□□□□□ -0.58
CDK5RAP3-217ENST00000580287 HIST1H1CP16403 213 aaKnown RBP11.44□□□□□ -0.58
CDK5RAP3-217ENST00000580287 DNASE1L1P49184 302 aa11.44□□□□□ -0.58
CDK5RAP3-217ENST00000580287 HCCSP53701 268 aa11.44□□□□□ -0.58
CDK5RAP3-217ENST00000580287 P2RX3P56373 397 aa11.44□□□□□ -0.58
CDK5RAP3-217ENST00000580287 SIGIRRQ6IA17 410 aa11.44□□□□□ -0.58
CDK5RAP3-217ENST00000580287 ARHGAP11AQ6P4F7 1023 aa11.44□□□□□ -0.58
CDK5RAP3-217ENST00000580287 ADGRG3Q86Y34 549 aa11.44□□□□□ -0.58
CDK5RAP3-217ENST00000580287 GRPEL2Q8TAA5 225 aa11.44□□□□□ -0.58
CDK5RAP3-217ENST00000580287 KISS1RQ969F8 398 aaPredicted RBP11.44□□□□□ -0.58
CDK5RAP3-217ENST00000580287 KIAA1143Q96AT1 154 aaPredicted RBP11.44□□□□□ -0.58
CDK5RAP3-217ENST00000580287 MED30Q96HR3 178 aa11.44□□□□□ -0.58
CDK5RAP3-217ENST00000580287 EVA1AQ9H8M9 152 aa11.44□□□□□ -0.58
CDK5RAP3-217ENST00000580287 RPRD1BQ9NQG5 326 aaKnown RBP11.44□□□□□ -0.58
CDK5RAP3-217ENST00000580287 A0A0G2JMP0 313 aa11.43□□□□□ -0.58
CDK5RAP3-217ENST00000580287 CRYZL1O95825 349 aa11.43□□□□□ -0.58
CDK5RAP3-217ENST00000580287 CXCR1P25024 350 aa11.43□□□□□ -0.58
CDK5RAP3-217ENST00000580287 NAA10P41227 235 aaPredicted RBP11.43□□□□□ -0.58
CDK5RAP3-217ENST00000580287 RAB25P57735 213 aa11.43□□□□□ -0.58
CDK5RAP3-217ENST00000580287 SLC3A1Q07837 685 aa11.43□□□□□ -0.58
CDK5RAP3-217ENST00000580287 ZNF800Q2TB10 664 aaPredicted RBP eCLIP11.43□□□□□ -0.582e-6■□□□□ 11.2
CDK5RAP3-217ENST00000580287 PAMR1Q6UXH9 720 aa11.43□□□□□ -0.58
CDK5RAP3-217ENST00000580287 RNF138Q8WVD3 245 aa11.43□□□□□ -0.58
CDK5RAP3-217ENST00000580287 SMPDL3BQ92485 455 aa11.43□□□□□ -0.58
CDK5RAP3-217ENST00000580287 TAAR8Q969N4 342 aa11.43□□□□□ -0.58
CDK5RAP3-217ENST00000580287 TRIM63Q969Q1 353 aa11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms