RNA–Protein interactions for RNA: ENST00000574003.1

RPAIN-214, Transcript of RPA interacting protein, humanhuman

TSL 4 BASIC

Gene RPAIN, Length 561 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-214ENST00000574003 RAB39AQ14964 217 aa9.79□□□□□ -0.84
RPAIN-214ENST00000574003 GSG1Q2KHT4 349 aa9.79□□□□□ -0.84
RPAIN-214ENST00000574003 TMEM249Q2WGJ8 235 aa9.79□□□□□ -0.84
RPAIN-214ENST00000574003 COQ5Q5HYK3 327 aa9.79□□□□□ -0.84
RPAIN-214ENST00000574003 SPATA21Q7Z572 469 aa9.79□□□□□ -0.84
RPAIN-214ENST00000574003 NANOGNBQ7Z5D8 188 aa9.79□□□□□ -0.84
RPAIN-214ENST00000574003 VTCN1Q7Z7D3 282 aa9.79□□□□□ -0.84
RPAIN-214ENST00000574003 MICU2Q8IYU8 434 aa9.79□□□□□ -0.84
RPAIN-214ENST00000574003 CDK20Q8IZL9 346 aa9.79□□□□□ -0.84
RPAIN-214ENST00000574003 FAM169BQ8N8A8 192 aa9.79□□□□□ -0.84
RPAIN-214ENST00000574003 ANKK1Q8NFD2 765 aa9.79□□□□□ -0.84
RPAIN-214ENST00000574003 MPP4Q96JB8 637 aa9.79□□□□□ -0.84
RPAIN-214ENST00000574003 LRR1Q96L50 414 aa9.79□□□□□ -0.84
RPAIN-214ENST00000574003 FOXN4Q96NZ1 517 aa9.79□□□□□ -0.84
RPAIN-214ENST00000574003 ZNF317Q96PQ6 595 aaPredicted RBP9.79□□□□□ -0.84
RPAIN-214ENST00000574003 ZNF347Q96SE7 839 aa9.79□□□□□ -0.84
RPAIN-214ENST00000574003 SH3GL1Q99961 368 aa9.79□□□□□ -0.84
RPAIN-214ENST00000574003 SH3GL3Q99963 347 aa9.79□□□□□ -0.84
RPAIN-214ENST00000574003 GLTPQ9NZD2 209 aa9.79□□□□□ -0.84
RPAIN-214ENST00000574003 RIMS3Q9UJD0 308 aa9.79□□□□□ -0.84
RPAIN-214ENST00000574003 SNX13Q9Y5W8 968 aa9.79□□□□□ -0.84
RPAIN-214ENST00000574003 B9A039 149 aa9.78□□□□□ -0.84
RPAIN-214ENST00000574003 BCL10O95999 233 aa9.78□□□□□ -0.84
RPAIN-214ENST00000574003 F12P00748 615 aaPredicted RBP9.78□□□□□ -0.84
RPAIN-214ENST00000574003 TP53P04637 393 aaPredicted RBP9.78□□□□□ -0.84
RPAIN-214ENST00000574003 HIST1H2ABP04908 130 aa9.78□□□□□ -0.84
RPAIN-214ENST00000574003 COX4I1P13073 169 aa9.78□□□□□ -0.84
RPAIN-214ENST00000574003 CCL2P13500 99 aa9.78□□□□□ -0.84
RPAIN-214ENST00000574003 ZNF14P17017 642 aaPredicted RBP9.78□□□□□ -0.84
RPAIN-214ENST00000574003 KDELR2P33947 212 aa9.78□□□□□ -0.84
RPAIN-214ENST00000574003 MDH1P40925 334 aaKnown RBP9.78□□□□□ -0.84
RPAIN-214ENST00000574003 DAG1Q14118 895 aa9.78□□□□□ -0.84
RPAIN-214ENST00000574003 GGTLC2Q14390 218 aa9.78□□□□□ -0.84
RPAIN-214ENST00000574003 LAPTM4AQ15012 233 aa9.78□□□□□ -0.84
RPAIN-214ENST00000574003 MAPRE2Q15555 327 aa9.78□□□□□ -0.84
RPAIN-214ENST00000574003 C3orf36Q3SXR2 165 aa9.78□□□□□ -0.84
RPAIN-214ENST00000574003 C1QTNF12Q5T7M4 302 aa9.78□□□□□ -0.84
RPAIN-214ENST00000574003 ERICH5Q6P6B1 374 aa9.78□□□□□ -0.84
RPAIN-214ENST00000574003 HIST3H2AQ7L7L0 130 aa9.78□□□□□ -0.84
RPAIN-214ENST00000574003 SLC15A3Q8IY34 581 aa9.78□□□□□ -0.84
RPAIN-214ENST00000574003 SYT14Q8NB59 555 aa9.78□□□□□ -0.84
RPAIN-214ENST00000574003 RBM15BQ8NDT2 890 aaKnown RBP9.78□□□□□ -0.84
RPAIN-214ENST00000574003 NUP37Q8NFH4 326 aa9.78□□□□□ -0.84
RPAIN-214ENST00000574003 OR2T12Q8NG77 320 aa9.78□□□□□ -0.84
RPAIN-214ENST00000574003 OR4F15Q8NGB8 312 aa9.78□□□□□ -0.84
RPAIN-214ENST00000574003 OR6X1Q8NH79 312 aa9.78□□□□□ -0.84
RPAIN-214ENST00000574003 TMEM239Q8WW34 195 aa9.78□□□□□ -0.84
RPAIN-214ENST00000574003 HIST1H2ACQ93077 130 aa9.78□□□□□ -0.84
RPAIN-214ENST00000574003 SGTBQ96EQ0 304 aa9.78□□□□□ -0.84
RPAIN-214ENST00000574003 TNFRSF13CQ96RJ3 184 aa9.78□□□□□ -0.84
RPAIN-214ENST00000574003 DOK1Q99704 481 aa9.78□□□□□ -0.84
RPAIN-214ENST00000574003 OR51B6Q9H340 312 aa9.78□□□□□ -0.84
RPAIN-214ENST00000574003 TPK1Q9H3S4 243 aa9.78□□□□□ -0.84
RPAIN-214ENST00000574003 PLK3Q9H4B4 646 aa9.78□□□□□ -0.84
RPAIN-214ENST00000574003 CCDC134Q9H6E4 229 aa9.78□□□□□ -0.84
RPAIN-214ENST00000574003 GID8Q9NWU2 228 aa9.78□□□□□ -0.84
RPAIN-214ENST00000574003 RHCGQ9UBD6 479 aa9.78□□□□□ -0.84
RPAIN-214ENST00000574003 ZNF229Q9UJW7 825 aa9.78□□□□□ -0.84
RPAIN-214ENST00000574003 BAG5Q9UL15 447 aa9.78□□□□□ -0.84
RPAIN-214ENST00000574003 IGKV1D-43A0A0B4J1Z2 117 aa9.77□□□□□ -0.85
RPAIN-214ENST00000574003 IGHV4-61A0A0C4DH41 118 aa9.77□□□□□ -0.85
RPAIN-214ENST00000574003 ELOVL7A1L3X0 281 aa9.77□□□□□ -0.85
RPAIN-214ENST00000574003 LYNX1G3V0Z9 82 aa9.77□□□□□ -0.85
RPAIN-214ENST00000574003 DHHO43323 396 aa9.77□□□□□ -0.85
RPAIN-214ENST00000574003 TRMUO75648 421 aaKnown RBP9.77□□□□□ -0.85
RPAIN-214ENST00000574003 OR5F1O95221 314 aa9.77□□□□□ -0.85
RPAIN-214ENST00000574003 MT-ND1P03886 318 aa9.77□□□□□ -0.85
RPAIN-214ENST00000574003 QDPRP09417 244 aa9.77□□□□□ -0.85
RPAIN-214ENST00000574003 PGA4P0DJD7 388 aa9.77□□□□□ -0.85
RPAIN-214ENST00000574003 PGA3P0DJD8 388 aa9.77□□□□□ -0.85
RPAIN-214ENST00000574003 LYNX1P0DP58 116 aa9.77□□□□□ -0.85
RPAIN-214ENST00000574003 BMP4P12644 408 aa9.77□□□□□ -0.85
RPAIN-214ENST00000574003 ZNF35P13682 527 aa9.77□□□□□ -0.85
RPAIN-214ENST00000574003 ZNF16P17020 682 aaPredicted RBP9.77□□□□□ -0.85
RPAIN-214ENST00000574003 TCN1P20061 433 aaPredicted RBP9.77□□□□□ -0.85
RPAIN-214ENST00000574003 NPR2P20594 1047 aa9.77□□□□□ -0.85
RPAIN-214ENST00000574003 NR4A1P22736 598 aa9.77□□□□□ -0.85
RPAIN-214ENST00000574003 PDLIM4P50479 330 aa9.77□□□□□ -0.85
RPAIN-214ENST00000574003 DSCR9P59020 149 aa9.77□□□□□ -0.85
RPAIN-214ENST00000574003 RAB1AP62820 205 aa9.77□□□□□ -0.85
RPAIN-214ENST00000574003 LIPEQ05469 1076 aa9.77□□□□□ -0.85
RPAIN-214ENST00000574003 LOXL1Q08397 574 aaPredicted RBP9.77□□□□□ -0.85
RPAIN-214ENST00000574003 TOP3AQ13472 1001 aaPredicted RBP9.77□□□□□ -0.85
RPAIN-214ENST00000574003 EFNB3Q15768 340 aa9.77□□□□□ -0.85
RPAIN-214ENST00000574003 ZNF627Q7L945 461 aa9.77□□□□□ -0.85
RPAIN-214ENST00000574003 IGFN1Q86VF2 1251 aa9.77□□□□□ -0.85
RPAIN-214ENST00000574003 LRP11Q86VZ4 500 aa9.77□□□□□ -0.85
RPAIN-214ENST00000574003 ZNF584Q8IVC4 421 aa9.77□□□□□ -0.85
RPAIN-214ENST00000574003 PAQR4Q8N4S7 273 aaPredicted RBP9.77□□□□□ -0.85
RPAIN-214ENST00000574003 CLDN22Q8N7P3 220 aa9.77□□□□□ -0.85
RPAIN-214ENST00000574003 ARIH2OSQ8N7S6 290 aa9.77□□□□□ -0.85
RPAIN-214ENST00000574003 PCYOX1LQ8NBM8 494 aa9.77□□□□□ -0.85
RPAIN-214ENST00000574003 RASSF5Q8WWW0 418 aa9.77□□□□□ -0.85
RPAIN-214ENST00000574003 ASB10Q8WXI3 467 aa9.77□□□□□ -0.85
RPAIN-214ENST00000574003 MCHR2Q969V1 340 aa9.77□□□□□ -0.85
RPAIN-214ENST00000574003 ZNF566Q969W8 418 aa9.77□□□□□ -0.85
RPAIN-214ENST00000574003 SLC25A44Q96H78 314 aaPredicted RBP9.77□□□□□ -0.85
RPAIN-214ENST00000574003 SYT3Q9BQG1 590 aa9.77□□□□□ -0.85
RPAIN-214ENST00000574003 MRPL37Q9BZE1 423 aaKnown RBP9.77□□□□□ -0.85
RPAIN-214ENST00000574003 ZNF442Q9H7R0 627 aa9.77□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms