RNA–Protein interactions for RNA: ENST00000572083.5

CCDC40-206, Transcript of coiled-coil domain containing 40, humanhuman

TSL 2

Gene CCDC40, Length 816 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-206ENST00000572083 GLO1Q04760 184 aa16.89■□□□□ 0.29
CCDC40-206ENST00000572083 ALG10BQ5I7T1 473 aa16.89■□□□□ 0.29
CCDC40-206ENST00000572083 OGFOD2Q6N063 350 aa16.89■□□□□ 0.29
CCDC40-206ENST00000572083 RBMS3Q6XE24 437 aaKnown RBP16.89■□□□□ 0.29
CCDC40-206ENST00000572083 NET1Q7Z628 596 aaPredicted RBP16.89■□□□□ 0.29
CCDC40-206ENST00000572083 SNX32Q86XE0 403 aa16.89■□□□□ 0.29
CCDC40-206ENST00000572083 SKA3Q8IX90 412 aa16.89■□□□□ 0.29
CCDC40-206ENST00000572083 SLC30A7Q8NEW0 376 aa16.89■□□□□ 0.29
CCDC40-206ENST00000572083 SYNPRQ8TBG9 265 aa16.89■□□□□ 0.29
CCDC40-206ENST00000572083 ZBTB18Q99592 522 aa16.89■□□□□ 0.29
CCDC40-206ENST00000572083 GAL3ST1Q99999 423 aa16.89■□□□□ 0.29
CCDC40-206ENST00000572083 TPT1P8Q9HAU6 139 aa16.89■□□□□ 0.29
CCDC40-206ENST00000572083 GPR160Q9UJ42 338 aa16.89■□□□□ 0.29
CCDC40-206ENST00000572083 ARHGAP32A7KAX9 2087 aa16.89■□□□□ 0.29
CCDC40-206ENST00000572083 TMEM247A6NEH6 219 aa16.88■□□□□ 0.29
CCDC40-206ENST00000572083 DNAJC9-AS1A6NH13 148 aa16.88■□□□□ 0.29
CCDC40-206ENST00000572083 ZNF726A6NNF4 738 aa16.88■□□□□ 0.29
CCDC40-206ENST00000572083 ANP32DO95626 131 aa16.88■□□□□ 0.29
CCDC40-206ENST00000572083 LCKP06239 509 aa16.88■□□□□ 0.29
CCDC40-206ENST00000572083 NUDT7P0C024 238 aa16.88■□□□□ 0.29
CCDC40-206ENST00000572083 ZNF250P15622 560 aa16.88■□□□□ 0.29
CCDC40-206ENST00000572083 GATA3P23771 443 aa16.88■□□□□ 0.29
CCDC40-206ENST00000572083 PRTN3P24158 256 aa16.88■□□□□ 0.29
CCDC40-206ENST00000572083 SLC1A6P48664 564 aa16.88■□□□□ 0.29
CCDC40-206ENST00000572083 CSNK1A1P48729 337 aa16.88■□□□□ 0.29
CCDC40-206ENST00000572083 TEKQ02763 1124 aa16.88■□□□□ 0.29
CCDC40-206ENST00000572083 PUDPQ08623 228 aa16.88■□□□□ 0.29
CCDC40-206ENST00000572083 RBBP4Q09028 425 aa16.88■□□□□ 0.29
CCDC40-206ENST00000572083 IFFO1Q0D2I5 559 aa16.88■□□□□ 0.29
CCDC40-206ENST00000572083 TSTQ16762 297 aaKnown RBP16.88■□□□□ 0.29
CCDC40-206ENST00000572083 MMEL1Q495T6 779 aa16.88■□□□□ 0.29
CCDC40-206ENST00000572083 LRRC17Q8N6Y2 441 aa16.88■□□□□ 0.29
CCDC40-206ENST00000572083 ICA1LQ8NDH6 482 aa16.88■□□□□ 0.29
CCDC40-206ENST00000572083 MAL2Q969L2 176 aa16.88■□□□□ 0.29
CCDC40-206ENST00000572083 SLC41A3Q96GZ6 507 aa16.88■□□□□ 0.29
CCDC40-206ENST00000572083 ASPNQ9BXN1 380 aa16.88■□□□□ 0.29
CCDC40-206ENST00000572083 SAP30LQ9HAJ7 183 aa16.88■□□□□ 0.29
CCDC40-206ENST00000572083 DECR2Q9NUI1 292 aa16.88■□□□□ 0.29
CCDC40-206ENST00000572083 PNPOQ9NVS9 261 aa16.88■□□□□ 0.29
CCDC40-206ENST00000572083 EPB41L3Q9Y2J2 1087 aaPredicted RBP16.88■□□□□ 0.29
CCDC40-206ENST00000572083 LRRN3E7EW58 273 aa16.87■□□□□ 0.29
CCDC40-206ENST00000572083 BGLAPP02818 100 aa16.87■□□□□ 0.29
CCDC40-206ENST00000572083 ZFP36P26651 326 aaKnown RBP16.87■□□□□ 0.29
CCDC40-206ENST00000572083 PMS2P3Q13401 168 aa16.87■□□□□ 0.29
CCDC40-206ENST00000572083 HFEQ30201 348 aa16.87■□□□□ 0.29
CCDC40-206ENST00000572083 NHLRC1Q6VVB1 395 aa16.87■□□□□ 0.29
CCDC40-206ENST00000572083 COMTD1Q86VU5 262 aa16.87■□□□□ 0.29
CCDC40-206ENST00000572083 TAF15Q92804 592 aaKnown RBP eCLIP16.87■□□□□ 0.29
CCDC40-206ENST00000572083 SLC35B4Q969S0 331 aa16.87■□□□□ 0.29
CCDC40-206ENST00000572083 LRRC58Q96CX6 371 aa16.87■□□□□ 0.29
CCDC40-206ENST00000572083 TIMD4Q96H15 378 aa16.87■□□□□ 0.29
CCDC40-206ENST00000572083 C1orf147Q96MC9 270 aaPredicted RBP16.87■□□□□ 0.29
CCDC40-206ENST00000572083 MOGAT1Q96PD6 335 aa16.87■□□□□ 0.29
CCDC40-206ENST00000572083 SH3GL3Q99963 347 aa16.87■□□□□ 0.29
CCDC40-206ENST00000572083 RSPO3Q9BXY4 272 aaPredicted RBP16.87■□□□□ 0.29
CCDC40-206ENST00000572083 CDH20Q9HBT6 801 aa16.87■□□□□ 0.29
CCDC40-206ENST00000572083 SLCO1C1Q9NYB5 712 aa16.87■□□□□ 0.29
CCDC40-206ENST00000572083 NKIRAS2Q9NYR9 191 aa16.87■□□□□ 0.29
CCDC40-206ENST00000572083 GPR45Q9Y5Y3 372 aa16.87■□□□□ 0.29
CCDC40-206ENST00000572083 A0A0G2JK05 382 aa16.86■□□□□ 0.29
CCDC40-206ENST00000572083 SLC22A23A1A5C7 686 aa16.86■□□□□ 0.29
CCDC40-206ENST00000572083 ISPDA4D126 451 aa16.86■□□□□ 0.29
CCDC40-206ENST00000572083 SDHDO14521 159 aa16.86■□□□□ 0.29
CCDC40-206ENST00000572083 MAKP20794 623 aa16.86■□□□□ 0.29
CCDC40-206ENST00000572083 AHCYP23526 432 aa16.86■□□□□ 0.29
CCDC40-206ENST00000572083 PIWIL3Q7Z3Z3 882 aaKnown RBP16.86■□□□□ 0.29
CCDC40-206ENST00000572083 RETREG3Q86VR2 466 aa16.86■□□□□ 0.29
CCDC40-206ENST00000572083 SLC22A24Q8N4F4 322 aa16.86■□□□□ 0.29
CCDC40-206ENST00000572083 LSMEM1Q8N8F7 131 aa16.86■□□□□ 0.29
CCDC40-206ENST00000572083 SCAIQ8N9R8 606 aa16.86■□□□□ 0.29
CCDC40-206ENST00000572083 DNAJA4Q8WW22 397 aaPredicted RBP16.86■□□□□ 0.29
CCDC40-206ENST00000572083 RAB1CQ92928 201 aa16.86■□□□□ 0.29
CCDC40-206ENST00000572083 UBAP1Q9NZ09 502 aa16.86■□□□□ 0.29
CCDC40-206ENST00000572083 OR8G3PP0DMU2 310 aa16.85■□□□□ 0.29
CCDC40-206ENST00000572083 BIDP55957 195 aa16.85■□□□□ 0.29
CCDC40-206ENST00000572083 ARMCX4Q5H9R4 360 aa16.85■□□□□ 0.29
CCDC40-206ENST00000572083 WDR88Q6ZMY6 472 aa16.85■□□□□ 0.29
CCDC40-206ENST00000572083 DOK3Q7L591 496 aa16.85■□□□□ 0.29
CCDC40-206ENST00000572083 TREML1Q86YW5 311 aa16.85■□□□□ 0.29
CCDC40-206ENST00000572083 C10orf53Q8N6V4 93 aa16.85■□□□□ 0.29
CCDC40-206ENST00000572083 GLB1L3Q8NCI6 653 aaPredicted RBP16.85■□□□□ 0.29
CCDC40-206ENST00000572083 ZNF519Q8TB69 540 aa16.85■□□□□ 0.29
CCDC40-206ENST00000572083 C11orf40Q8WZ69 217 aa16.85■□□□□ 0.29
CCDC40-206ENST00000572083 CCL17Q92583 94 aa16.85■□□□□ 0.29
CCDC40-206ENST00000572083 THUMPD1Q9NXG2 353 aaKnown RBP16.85■□□□□ 0.29
CCDC40-206ENST00000572083 MRPL39Q9NYK5 338 aaKnown RBP16.85■□□□□ 0.29
CCDC40-206ENST00000572083 HAO1Q9UJM8 370 aa16.85■□□□□ 0.29
CCDC40-206ENST00000572083 C11orf98E9PRG8 122 aa16.84■□□□□ 0.29
CCDC40-206ENST00000572083 PLPP3O14495 311 aa16.84■□□□□ 0.29
CCDC40-206ENST00000572083 ZCCHC18P0CG32 403 aa16.84■□□□□ 0.29
CCDC40-206ENST00000572083 BGNP21810 368 aa16.84■□□□□ 0.29
CCDC40-206ENST00000572083 EPHA3P29320 983 aa16.84■□□□□ 0.29
CCDC40-206ENST00000572083 BAMBIQ13145 260 aa16.84■□□□□ 0.29
CCDC40-206ENST00000572083 HNRNPA0Q13151 305 aaKnown RBP16.84■□□□□ 0.29
CCDC40-206ENST00000572083 ULK3Q6PHR2 472 aa16.84■□□□□ 0.29
CCDC40-206ENST00000572083 BCL6BQ8N143 479 aaPredicted RBP16.84■□□□□ 0.29
CCDC40-206ENST00000572083 DEFB108BQ8NET1 73 aa16.84■□□□□ 0.29
CCDC40-206ENST00000572083 OR6S1Q8NH40 331 aa16.84■□□□□ 0.29
CCDC40-206ENST00000572083 BBS10Q8TAM1 723 aa16.84■□□□□ 0.29
CCDC40-206ENST00000572083 EPYCQ99645 322 aa16.84■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms