RNA–Protein interactions for RNA: ENST00000569080.1

CDH3-209, Transcript of cadherin 3, humanhuman

TSL 5

Gene CDH3, Length 291 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-209ENST00000569080 FOXB1Q99853 325 aa6.77□□□□□ -1.33
CDH3-209ENST00000569080 ECSITQ9BQ95 431 aa6.77□□□□□ -1.33
CDH3-209ENST00000569080 MRPL13Q9BYD1 178 aaKnown RBP6.77□□□□□ -1.33
CDH3-209ENST00000569080 PLK3Q9H4B4 646 aa6.77□□□□□ -1.33
CDH3-209ENST00000569080 NANSQ9NR45 359 aa6.77□□□□□ -1.33
CDH3-209ENST00000569080 GID8Q9NWU2 228 aa6.77□□□□□ -1.33
CDH3-209ENST00000569080 RIMS3Q9UJD0 308 aa6.77□□□□□ -1.33
CDH3-209ENST00000569080 ADAM21Q9UKJ8 722 aa6.77□□□□□ -1.33
CDH3-209ENST00000569080 A4GNTQ9UNA3 340 aa6.77□□□□□ -1.33
CDH3-209ENST00000569080 TMEM129A0AVI4 362 aa6.76□□□□□ -1.33
CDH3-209ENST00000569080 ELOVL7A1L3X0 281 aa6.76□□□□□ -1.33
CDH3-209ENST00000569080 NPIPB13A6NJU9 1138 aa6.76□□□□□ -1.33
CDH3-209ENST00000569080 B9A039 149 aa6.76□□□□□ -1.33
CDH3-209ENST00000569080 NPIPB4C9JG80 1138 aa6.76□□□□□ -1.33
CDH3-209ENST00000569080 FFAR1O14842 300 aa6.76□□□□□ -1.33
CDH3-209ENST00000569080 CD5LO43866 347 aa6.76□□□□□ -1.33
CDH3-209ENST00000569080 GPRIN2O60269 458 aa6.76□□□□□ -1.33
CDH3-209ENST00000569080 OR7A10O76100 309 aa6.76□□□□□ -1.33
CDH3-209ENST00000569080 OR4A8P0C604 315 aa6.76□□□□□ -1.33
CDH3-209ENST00000569080 THRBP10828 461 aa6.76□□□□□ -1.33
CDH3-209ENST00000569080 COX4I1P13073 169 aa6.76□□□□□ -1.33
CDH3-209ENST00000569080 ZNF35P13682 527 aa6.76□□□□□ -1.33
CDH3-209ENST00000569080 THBS4P35443 961 aa6.76□□□□□ -1.33
CDH3-209ENST00000569080 SERPINF1P36955 418 aa6.76□□□□□ -1.33
CDH3-209ENST00000569080 PPOXP50336 477 aa6.76□□□□□ -1.33
CDH3-209ENST00000569080 SLC7A2P52569 658 aa6.76□□□□□ -1.33
CDH3-209ENST00000569080 ZNF133P52736 654 aaPredicted RBP6.76□□□□□ -1.33
CDH3-209ENST00000569080 DSCR9P59020 149 aa6.76□□□□□ -1.33
CDH3-209ENST00000569080 TAS2R41P59536 307 aa6.76□□□□□ -1.33
CDH3-209ENST00000569080 SNRPD2P62316 118 aaKnown RBP6.76□□□□□ -1.33
CDH3-209ENST00000569080 LOXL1Q08397 574 aaPredicted RBP6.76□□□□□ -1.33
CDH3-209ENST00000569080 FHL1Q13642 323 aa6.76□□□□□ -1.33
CDH3-209ENST00000569080 RAB35Q15286 201 aa6.76□□□□□ -1.33
CDH3-209ENST00000569080 GSG1Q2KHT4 349 aa6.76□□□□□ -1.33
CDH3-209ENST00000569080 TMEM249Q2WGJ8 235 aa6.76□□□□□ -1.33
CDH3-209ENST00000569080 ARMC4Q5T2S8 1044 aa6.76□□□□□ -1.33
CDH3-209ENST00000569080 VHLLQ6RSH7 139 aa6.76□□□□□ -1.33
CDH3-209ENST00000569080 CLEC2AQ6UVW9 174 aa6.76□□□□□ -1.33
CDH3-209ENST00000569080 NANOGNBQ7Z5D8 188 aa6.76□□□□□ -1.33
CDH3-209ENST00000569080 TSEN54Q7Z6J9 526 aaKnown RBP6.76□□□□□ -1.33
CDH3-209ENST00000569080 ARPINQ7Z6K5 226 aa6.76□□□□□ -1.33
CDH3-209ENST00000569080 VTCN1Q7Z7D3 282 aa6.76□□□□□ -1.33
CDH3-209ENST00000569080 OFCC1Q8IZS5 231 aa6.76□□□□□ -1.33
CDH3-209ENST00000569080 ANKS4BQ8N8V4 417 aa6.76□□□□□ -1.33
CDH3-209ENST00000569080 NOXO1Q8NFA2 376 aa6.76□□□□□ -1.33
CDH3-209ENST00000569080 OR4F15Q8NGB8 312 aa6.76□□□□□ -1.33
CDH3-209ENST00000569080 OR6N1Q8NGY5 312 aa6.76□□□□□ -1.33
CDH3-209ENST00000569080 RP9Q8TA86 221 aaKnown RBP6.76□□□□□ -1.33
CDH3-209ENST00000569080 TMEM239Q8WW34 195 aa6.76□□□□□ -1.33
CDH3-209ENST00000569080 ASB10Q8WXI3 467 aa6.76□□□□□ -1.33
CDH3-209ENST00000569080 PRRC1Q96M27 445 aa6.76□□□□□ -1.33
CDH3-209ENST00000569080 MYLK2Q9H1R3 596 aa6.76□□□□□ -1.33
CDH3-209ENST00000569080 TMEM38BQ9NVV0 291 aa6.76□□□□□ -1.33
CDH3-209ENST00000569080 GLTPQ9NZD2 209 aa6.76□□□□□ -1.33
CDH3-209ENST00000569080 ABCD2Q9UBJ2 740 aa6.76□□□□□ -1.33
CDH3-209ENST00000569080 SNX13Q9Y5W8 968 aa6.76□□□□□ -1.33
CDH3-209ENST00000569080 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP6.75□□□□□ -1.33
CDH3-209ENST00000569080 IGKV1D-43A0A0B4J1Z2 117 aa6.75□□□□□ -1.33
CDH3-209ENST00000569080 ZNF726A6NNF4 738 aa6.75□□□□□ -1.33
CDH3-209ENST00000569080 KIAA1324LA8MWY0 1029 aaPredicted RBP6.75□□□□□ -1.33
CDH3-209ENST00000569080 CENPBD1B2RD01 187 aa6.75□□□□□ -1.33
CDH3-209ENST00000569080 J3KTA2 159 aa6.75□□□□□ -1.33
CDH3-209ENST00000569080 RNF13O43567 381 aa6.75□□□□□ -1.33
CDH3-209ENST00000569080 CRLF1O75462 422 aa6.75□□□□□ -1.33
CDH3-209ENST00000569080 F12P00748 615 aaPredicted RBP6.75□□□□□ -1.33
CDH3-209ENST00000569080 IGHG1P01857 330 aa6.75□□□□□ -1.33
CDH3-209ENST00000569080 F13BP05160 661 aa6.75□□□□□ -1.33
CDH3-209ENST00000569080 CSF3P09919 207 aa6.75□□□□□ -1.33
CDH3-209ENST00000569080 PATE4P0C8F1 98 aa6.75□□□□□ -1.33
CDH3-209ENST00000569080 UMPSP11172 480 aa6.75□□□□□ -1.33
CDH3-209ENST00000569080 SLC25A16P16260 332 aa6.75□□□□□ -1.33
CDH3-209ENST00000569080 FUT1P19526 365 aa6.75□□□□□ -1.33
CDH3-209ENST00000569080 NR4A1P22736 598 aa6.75□□□□□ -1.33
CDH3-209ENST00000569080 AQP2P41181 271 aa6.75□□□□□ -1.33
CDH3-209ENST00000569080 CAPZA2P47755 286 aa6.75□□□□□ -1.33
CDH3-209ENST00000569080 GIPRP48546 466 aa6.75□□□□□ -1.33
CDH3-209ENST00000569080 GSK3BP49841 420 aa6.75□□□□□ -1.33
CDH3-209ENST00000569080 SELENOWP63302 87 aa6.75□□□□□ -1.33
CDH3-209ENST00000569080 VLDLRP98155 873 aa6.75□□□□□ -1.33
CDH3-209ENST00000569080 LIPEQ05469 1076 aa6.75□□□□□ -1.33
CDH3-209ENST00000569080 CHRNB3Q05901 458 aa6.75□□□□□ -1.33
CDH3-209ENST00000569080 SNTB2Q13425 540 aaKnown RBP6.75□□□□□ -1.33
CDH3-209ENST00000569080 FXNQ16595 210 aa6.75□□□□□ -1.33
CDH3-209ENST00000569080 NRN1LQ496H8 165 aa6.75□□□□□ -1.33
CDH3-209ENST00000569080 HSP90B2PQ58FF3 399 aa6.75□□□□□ -1.33
CDH3-209ENST00000569080 C6orf52Q5T4I8 152 aa6.75□□□□□ -1.33
CDH3-209ENST00000569080 KRT80Q6KB66 452 aa6.75□□□□□ -1.33
CDH3-209ENST00000569080 HACD2Q6Y1H2 254 aa6.75□□□□□ -1.33
CDH3-209ENST00000569080 CBLL1Q75N03 491 aa6.75□□□□□ -1.33
CDH3-209ENST00000569080 PIWIL3Q7Z3Z3 882 aaKnown RBP6.75□□□□□ -1.33
CDH3-209ENST00000569080 SKA3Q8IX90 412 aa6.75□□□□□ -1.33
CDH3-209ENST00000569080 CDK20Q8IZL9 346 aa6.75□□□□□ -1.33
CDH3-209ENST00000569080 SVOPLQ8N434 492 aa6.75□□□□□ -1.33
CDH3-209ENST00000569080 SLC22A24Q8N4F4 322 aa6.75□□□□□ -1.33
CDH3-209ENST00000569080 LRRC75AQ8NAA5 344 aa6.75□□□□□ -1.33
CDH3-209ENST00000569080 RBM15BQ8NDT2 890 aaKnown RBP6.75□□□□□ -1.33
CDH3-209ENST00000569080 MOSPD2Q8NHP6 518 aa6.75□□□□□ -1.33
CDH3-209ENST00000569080 FAM168AQ92567 244 aa6.75□□□□□ -1.33
CDH3-209ENST00000569080 MCHR2Q969V1 340 aa6.75□□□□□ -1.33
CDH3-209ENST00000569080 ZNF566Q969W8 418 aa6.75□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms