RNA–Protein interactions for RNA: ENST00000568373.5

SMPD3-211, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

TSL 1 (best) BASIC

Gene SMPD3, Length 2,073 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-211ENST00000568373 NEDD4LQ96PU5 975 aa16.33■□□□□ 0.21
SMPD3-211ENST00000568373 SLC22A4Q9H015 551 aa16.33■□□□□ 0.21
SMPD3-211ENST00000568373 PTRH2Q9Y3E5 179 aaKnown RBP16.33■□□□□ 0.21
SMPD3-211ENST00000568373 IGHV1-45A0A0A0MS14 117 aa16.33■□□□□ 0.2
SMPD3-211ENST00000568373 KLF7O75840 302 aaPredicted RBP16.33■□□□□ 0.2
SMPD3-211ENST00000568373 RPP14O95059 124 aaKnown RBP16.33■□□□□ 0.2
SMPD3-211ENST00000568373 LDOC1O95751 146 aaPredicted RBP16.33■□□□□ 0.2
SMPD3-211ENST00000568373 MAP2K6P52564 334 aa16.33■□□□□ 0.2
SMPD3-211ENST00000568373 ZP4Q12836 540 aa16.33■□□□□ 0.2
SMPD3-211ENST00000568373 OR7A5Q15622 319 aa16.33■□□□□ 0.2
SMPD3-211ENST00000568373 SLC25A53Q5H9E4 307 aa16.33■□□□□ 0.2
SMPD3-211ENST00000568373 CEP78Q5JTW2 689 aa16.33■□□□□ 0.2
SMPD3-211ENST00000568373 TRIQKQ629K1 86 aa16.33■□□□□ 0.2
SMPD3-211ENST00000568373 ZNF517Q6ZMY9 492 aaPredicted RBP16.33■□□□□ 0.2
SMPD3-211ENST00000568373 ZNF248Q8NDW4 579 aa16.33■□□□□ 0.2
SMPD3-211ENST00000568373 IL17RDQ8NFM7 739 aa16.33■□□□□ 0.2
SMPD3-211ENST00000568373 TRMT10AQ8TBZ6 339 aaKnown RBP16.33■□□□□ 0.2
SMPD3-211ENST00000568373 MRGPRX4Q96LA9 322 aa16.33■□□□□ 0.2
SMPD3-211ENST00000568373 ZCCHC4Q9H5U6 513 aa16.33■□□□□ 0.2
SMPD3-211ENST00000568373 B3GAT2Q9NPZ5 323 aa16.33■□□□□ 0.2
SMPD3-211ENST00000568373 IKZF2Q9UKS7 526 aa16.33■□□□□ 0.2
SMPD3-211ENST00000568373 B3GALT1Q9Y5Z6 326 aa16.33■□□□□ 0.2
SMPD3-211ENST00000568373 KIF26BQ2KJY2 2108 aa16.32■□□□□ 0.2
SMPD3-211ENST00000568373 IGLV1-36A0A0B4J1U3 117 aa16.32■□□□□ 0.2
SMPD3-211ENST00000568373 SLC22A23A1A5C7 686 aa16.32■□□□□ 0.2
SMPD3-211ENST00000568373 PHYHO14832 338 aa16.32■□□□□ 0.2
SMPD3-211ENST00000568373 SLC16A7O60669 478 aa16.32■□□□□ 0.2
SMPD3-211ENST00000568373 EIF4EP06730 217 aaKnown RBP16.32■□□□□ 0.2
SMPD3-211ENST00000568373 ACP1P24666 158 aa16.32■□□□□ 0.2
SMPD3-211ENST00000568373 RPS27P42677 84 aaKnown RBP16.32■□□□□ 0.2
SMPD3-211ENST00000568373 CENPAP49450 140 aa16.32■□□□□ 0.2
SMPD3-211ENST00000568373 BLVRAP53004 296 aa16.32■□□□□ 0.2
SMPD3-211ENST00000568373 ALKBH1Q13686 389 aaKnown RBP16.32■□□□□ 0.2
SMPD3-211ENST00000568373 PLPPR5Q32ZL2 321 aa16.32■□□□□ 0.2
SMPD3-211ENST00000568373 SYT9Q86SS6 491 aa16.32■□□□□ 0.2
SMPD3-211ENST00000568373 OTOSQ8NHW6 89 aa16.32■□□□□ 0.2
SMPD3-211ENST00000568373 RGP1Q92546 391 aaPredicted RBP16.32■□□□□ 0.2
SMPD3-211ENST00000568373 HPS1Q92902 700 aa16.32■□□□□ 0.2
SMPD3-211ENST00000568373 MAP6Q96JE9 813 aa16.32■□□□□ 0.2
SMPD3-211ENST00000568373 SMAD5Q99717 465 aaKnown RBP16.32■□□□□ 0.2
SMPD3-211ENST00000568373 C11orf54Q9H0W9 315 aaPredicted RBP16.32■□□□□ 0.2
SMPD3-211ENST00000568373 NOX4Q9NPH5 578 aa16.32■□□□□ 0.2
SMPD3-211ENST00000568373 TEX51A0A1B0GUA7 166 aa16.31■□□□□ 0.2
SMPD3-211ENST00000568373 MS4A18H0YCH9 400 aa16.31■□□□□ 0.2
SMPD3-211ENST00000568373 PAHP00439 452 aa16.31■□□□□ 0.2
SMPD3-211ENST00000568373 HLA-DQA2P01906 255 aa16.31■□□□□ 0.2
SMPD3-211ENST00000568373 EPXP11678 715 aa16.31■□□□□ 0.2
SMPD3-211ENST00000568373 PSKH1P11801 424 aa16.31■□□□□ 0.2
SMPD3-211ENST00000568373 HLA-DOBP13765 273 aa16.31■□□□□ 0.2
SMPD3-211ENST00000568373 CTLA4P16410 223 aa16.31■□□□□ 0.2
SMPD3-211ENST00000568373 NPR2P20594 1047 aa16.31■□□□□ 0.2
SMPD3-211ENST00000568373 TALDO1P37837 337 aa16.31■□□□□ 0.2
SMPD3-211ENST00000568373 CASP3P42574 277 aa16.31■□□□□ 0.2
SMPD3-211ENST00000568373 MELKQ14680 651 aa16.31■□□□□ 0.2
SMPD3-211ENST00000568373 MS4A18Q3C1V0 323 aa16.31■□□□□ 0.2
SMPD3-211ENST00000568373 TCEAL6Q6IPX3 200 aa16.31■□□□□ 0.2
SMPD3-211ENST00000568373 H1FNTQ75WM6 255 aaPredicted RBP16.31■□□□□ 0.2
SMPD3-211ENST00000568373 KDM8Q8N371 416 aa16.31■□□□□ 0.2
SMPD3-211ENST00000568373 ZBTB44Q8NCP5 570 aa16.31■□□□□ 0.2
SMPD3-211ENST00000568373 THEM6Q8WUY1 208 aa16.31■□□□□ 0.2
SMPD3-211ENST00000568373 TCEAL3Q969E4 200 aa16.31■□□□□ 0.2
SMPD3-211ENST00000568373 ZNF700Q9H0M5 742 aa16.31■□□□□ 0.2
SMPD3-211ENST00000568373 TSPAN10Q9H1Z9 355 aaPredicted RBP16.31■□□□□ 0.2
SMPD3-211ENST00000568373 SLC39A1Q9NY26 324 aa16.31■□□□□ 0.2
SMPD3-211ENST00000568373 KCNG2Q9UJ96 466 aa16.31■□□□□ 0.2
SMPD3-211ENST00000568373 SHISA8B8ZZ34 492 aa16.31■□□□□ 0.2
SMPD3-211ENST00000568373 PIN1P1O15428 100 aa16.31■□□□□ 0.2
SMPD3-211ENST00000568373 PLA2G10O15496 165 aa16.31■□□□□ 0.2
SMPD3-211ENST00000568373 COX6A1P12074 109 aa16.31■□□□□ 0.2
SMPD3-211ENST00000568373 ATF1P18846 271 aa16.31■□□□□ 0.2
SMPD3-211ENST00000568373 RBMS1P29558 406 aaKnown RBP16.31■□□□□ 0.2
SMPD3-211ENST00000568373 C19orf18Q8NEA5 215 aa16.31■□□□□ 0.2
SMPD3-211ENST00000568373 OR4M1Q8NGD0 313 aa16.31■□□□□ 0.2
SMPD3-211ENST00000568373 OR5AK2Q8NH90 309 aa16.31■□□□□ 0.2
SMPD3-211ENST00000568373 IMMP1LQ96LU5 166 aa16.31■□□□□ 0.2
SMPD3-211ENST00000568373 POTEKPQ9BYX7 375 aa16.31■□□□□ 0.2
SMPD3-211ENST00000568373 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP16.31■□□□□ 0.2
SMPD3-211ENST00000568373 FRRS1LQ9P0K9 344 aa16.31■□□□□ 0.2
SMPD3-211ENST00000568373 HS3ST3B1Q9Y662 390 aa16.31■□□□□ 0.2
SMPD3-211ENST00000568373 CACNA1CQ13936 2221 aa16.3■□□□□ 0.2
SMPD3-211ENST00000568373 A0A0G2JMP0 313 aa16.3■□□□□ 0.2
SMPD3-211ENST00000568373 A0A0X1KG70 313 aa16.3■□□□□ 0.2
SMPD3-211ENST00000568373 A6NIZ1 184 aa16.3■□□□□ 0.2
SMPD3-211ENST00000568373 ACOD1A6NK06 481 aa16.3■□□□□ 0.2
SMPD3-211ENST00000568373 HSPB2A8KAH6 182 aa16.3■□□□□ 0.2
SMPD3-211ENST00000568373 ITGA10O75578 1167 aa16.3■□□□□ 0.2
SMPD3-211ENST00000568373 ZNF883P0CG24 379 aa16.3■□□□□ 0.2
SMPD3-211ENST00000568373 TFPIP10646 304 aa16.3■□□□□ 0.2
SMPD3-211ENST00000568373 IMPDH2P12268 514 aa16.3■□□□□ 0.2
SMPD3-211ENST00000568373 SRMP19623 302 aa16.3■□□□□ 0.2
SMPD3-211ENST00000568373 MPLP40238 635 aa16.3■□□□□ 0.2
SMPD3-211ENST00000568373 RAP1BP61224 184 aa16.3■□□□□ 0.2
SMPD3-211ENST00000568373 RAP1AP62834 184 aa16.3■□□□□ 0.2
SMPD3-211ENST00000568373 HSPB2Q16082 182 aa16.3■□□□□ 0.2
SMPD3-211ENST00000568373 EXT1Q16394 746 aa16.3■□□□□ 0.2
SMPD3-211ENST00000568373 CARTPTQ16568 116 aa16.3■□□□□ 0.2
SMPD3-211ENST00000568373 OR4M2Q8NGB6 313 aa16.3■□□□□ 0.2
SMPD3-211ENST00000568373 OR2Y1Q8NGV0 311 aa16.3■□□□□ 0.2
SMPD3-211ENST00000568373 DERL3Q96Q80 235 aa16.3■□□□□ 0.2
SMPD3-211ENST00000568373 CHST11Q9NPF2 352 aa16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms