RNA–Protein interactions for RNA: ENST00000565815.1

LINC00561-201, long intergenic non-protein coding RNA 561, humanhuman

BASIC

Gene LINC00561, Length 2,738 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00561-201ENST00000565815 CYP2A7P20853 494 aa3.71□□□□□ -1.82
LINC00561-201ENST00000565815 NSG1P42857 185 aa3.71□□□□□ -1.82
LINC00561-201ENST00000565815 MAP2K4P45985 399 aa3.71□□□□□ -1.82
LINC00561-201ENST00000565815 RGS6P49758 472 aa3.71□□□□□ -1.82
LINC00561-201ENST00000565815 OR2B6P58173 313 aa3.71□□□□□ -1.82
LINC00561-201ENST00000565815 SMIM11AP58511 58 aa3.71□□□□□ -1.82
LINC00561-201ENST00000565815 LINC01547P58512 204 aaPredicted RBP3.71□□□□□ -1.82
LINC00561-201ENST00000565815 ASAH1Q13510 395 aa3.71□□□□□ -1.82
LINC00561-201ENST00000565815 IGFBP7Q16270 282 aa3.71□□□□□ -1.82
LINC00561-201ENST00000565815 IFI44LQ53G44 452 aa3.71□□□□□ -1.82
LINC00561-201ENST00000565815 CARD16Q5EG05 197 aa3.71□□□□□ -1.82
LINC00561-201ENST00000565815 GPRC6AQ5T6X5 926 aa3.71□□□□□ -1.82
LINC00561-201ENST00000565815 ARMC12Q5T9G4 340 aa3.71□□□□□ -1.82
LINC00561-201ENST00000565815 GUSBP11Q6P575 273 aa3.71□□□□□ -1.82
LINC00561-201ENST00000565815 METAP1DQ6UB28 335 aaPredicted RBP3.71□□□□□ -1.82
LINC00561-201ENST00000565815 CCBE1Q6UXH8 406 aaPredicted RBP3.71□□□□□ -1.82
LINC00561-201ENST00000565815 Q6ZSR6 202 aa3.71□□□□□ -1.82
LINC00561-201ENST00000565815 AHSA2Q719I0 299 aa3.71□□□□□ -1.82
LINC00561-201ENST00000565815 TAS2R42Q7RTR8 314 aa3.71□□□□□ -1.82
LINC00561-201ENST00000565815 NR2C2APQ86WQ0 139 aa3.71□□□□□ -1.82
LINC00561-201ENST00000565815 PEX5LQ8IYB4 626 aa3.71□□□□□ -1.82
LINC00561-201ENST00000565815 PIANPQ8IYJ0 282 aa3.71□□□□□ -1.82
LINC00561-201ENST00000565815 CFAP206Q8IYR0 622 aa3.71□□□□□ -1.82
LINC00561-201ENST00000565815 METTL4Q8N3J2 472 aa3.71□□□□□ -1.82
LINC00561-201ENST00000565815 GDPD1Q8N9F7 314 aa3.71□□□□□ -1.82
LINC00561-201ENST00000565815 ASCC1Q8N9N2 400 aaKnown RBP3.71□□□□□ -1.82
LINC00561-201ENST00000565815 ZNF383Q8NA42 475 aa3.71□□□□□ -1.82
LINC00561-201ENST00000565815 LPCAT1Q8NF37 534 aa3.71□□□□□ -1.82
LINC00561-201ENST00000565815 LMX1AQ8TE12 382 aa3.71□□□□□ -1.82
LINC00561-201ENST00000565815 SELENOMQ8WWX9 145 aa3.71□□□□□ -1.82
LINC00561-201ENST00000565815 AP3S1Q92572 193 aa3.71□□□□□ -1.82
LINC00561-201ENST00000565815 RPL3LQ92901 407 aaKnown RBP3.71□□□□□ -1.82
LINC00561-201ENST00000565815 COQ7Q99807 217 aa3.71□□□□□ -1.82
LINC00561-201ENST00000565815 MED18Q9BUE0 208 aa3.71□□□□□ -1.82
LINC00561-201ENST00000565815 TMEM38AQ9H6F2 299 aa3.71□□□□□ -1.82
LINC00561-201ENST00000565815 NIPAL2Q9H841 368 aa3.71□□□□□ -1.82
LINC00561-201ENST00000565815 DDX31Q9H8H2 851 aaKnown RBP3.71□□□□□ -1.82
LINC00561-201ENST00000565815 CLN6Q9NWW5 311 aa3.71□□□□□ -1.82
LINC00561-201ENST00000565815 COQ3Q9NZJ6 369 aa3.71□□□□□ -1.82
LINC00561-201ENST00000565815 B3GAT1Q9P2W7 334 aa3.71□□□□□ -1.82
LINC00561-201ENST00000565815 PISDQ9UG56 409 aa3.71□□□□□ -1.82
LINC00561-201ENST00000565815 KCNK7Q9Y2U2 307 aa3.71□□□□□ -1.82
LINC00561-201ENST00000565815 POMT1Q9Y6A1 747 aa3.71□□□□□ -1.82
LINC00561-201ENST00000565815 FLNBO75369 2602 aaKnown RBP3.71□□□□□ -1.82
LINC00561-201ENST00000565815 CEP295Q9C0D2 2601 aa3.71□□□□□ -1.82
LINC00561-201ENST00000565815 ANKRD11Q6UB99 2663 aaPredicted RBP3.71□□□□□ -1.82
LINC00561-201ENST00000565815 GOLGA4Q13439 2230 aaKnown RBP3.71□□□□□ -1.82
LINC00561-201ENST00000565815 COL27A1Q8IZC6 1860 aaPredicted RBP3.71□□□□□ -1.82
LINC00561-201ENST00000565815 A0A0G2JNG1 304 aa3.71□□□□□ -1.82
LINC00561-201ENST00000565815 IFITM10A6NMD0 228 aa3.71□□□□□ -1.82
LINC00561-201ENST00000565815 CCL22O00626 93 aa3.71□□□□□ -1.82
LINC00561-201ENST00000565815 RAD1O60671 282 aa3.71□□□□□ -1.82
LINC00561-201ENST00000565815 AP2A2O94973 939 aa3.71□□□□□ -1.82
LINC00561-201ENST00000565815 KCNK2O95069 426 aa3.71□□□□□ -1.82
LINC00561-201ENST00000565815 ZNF682O95780 498 aa3.71□□□□□ -1.82
LINC00561-201ENST00000565815 HOXC4P09017 264 aaPredicted RBP3.71□□□□□ -1.82
LINC00561-201ENST00000565815 AMD1P17707 334 aa3.71□□□□□ -1.82
LINC00561-201ENST00000565815 CFL1P23528 166 aaKnown RBP3.71□□□□□ -1.82
LINC00561-201ENST00000565815 GADD45AP24522 165 aa3.71□□□□□ -1.82
LINC00561-201ENST00000565815 PTAFRP25105 342 aa3.71□□□□□ -1.82
LINC00561-201ENST00000565815 HLA-DMAP28067 261 aa3.71□□□□□ -1.82
LINC00561-201ENST00000565815 ERP29P30040 261 aaKnown RBP3.71□□□□□ -1.82
LINC00561-201ENST00000565815 SPAM1P38567 509 aa3.71□□□□□ -1.82
LINC00561-201ENST00000565815 SLC6A12P48065 614 aa3.71□□□□□ -1.82
LINC00561-201ENST00000565815 RORCP51449 518 aa3.71□□□□□ -1.82
LINC00561-201ENST00000565815 IST1P53990 364 aa3.71□□□□□ -1.82
LINC00561-201ENST00000565815 FOXG1P55316 489 aaPredicted RBP3.71□□□□□ -1.82
LINC00561-201ENST00000565815 GNG2P59768 71 aa3.71□□□□□ -1.82
LINC00561-201ENST00000565815 SNRPGP62308 76 aaKnown RBP3.71□□□□□ -1.82
LINC00561-201ENST00000565815 SELENOWP63302 87 aa3.71□□□□□ -1.82
LINC00561-201ENST00000565815 SCN1BQ07699 218 aa3.71□□□□□ -1.82
LINC00561-201ENST00000565815 SGCGQ13326 291 aa3.71□□□□□ -1.82
LINC00561-201ENST00000565815 CDH18Q13634 790 aa3.71□□□□□ -1.82
LINC00561-201ENST00000565815 KIR2DS5Q14953 304 aa3.71□□□□□ -1.82
LINC00561-201ENST00000565815 NCF4Q15080 339 aa3.71□□□□□ -1.82
LINC00561-201ENST00000565815 CDK10Q15131 360 aa3.71□□□□□ -1.82
LINC00561-201ENST00000565815 ZNF630Q2M218 657 aaPredicted RBP3.71□□□□□ -1.82
LINC00561-201ENST00000565815 ZFP69Q49AA0 526 aa3.71□□□□□ -1.82
LINC00561-201ENST00000565815 SPIN4Q56A73 249 aa3.71□□□□□ -1.82
LINC00561-201ENST00000565815 DDX59Q5T1V6 619 aaKnown RBP eCLIP3.71□□□□□ -1.82
LINC00561-201ENST00000565815 TMEM236Q5W0B7 351 aa3.71□□□□□ -1.82
LINC00561-201ENST00000565815 CST9LP1Q5W188 147 aa3.71□□□□□ -1.82
LINC00561-201ENST00000565815 DOK6Q6PKX4 331 aa3.71□□□□□ -1.82
LINC00561-201ENST00000565815 SCIMPQ6UWF3 145 aa3.71□□□□□ -1.82
LINC00561-201ENST00000565815 UNQ6126/PRO20091Q6UXV3 157 aa3.71□□□□□ -1.82
LINC00561-201ENST00000565815 UNC5DQ6UXZ4 953 aa3.71□□□□□ -1.82
LINC00561-201ENST00000565815 CEACAM20Q6UY09 585 aa3.71□□□□□ -1.82
LINC00561-201ENST00000565815 HSDL2Q6YN16 418 aa3.71□□□□□ -1.82
LINC00561-201ENST00000565815 ZNF704Q6ZNC4 412 aaPredicted RBP3.71□□□□□ -1.82
LINC00561-201ENST00000565815 HDDC2Q7Z4H3 204 aa3.71□□□□□ -1.82
LINC00561-201ENST00000565815 RTN4RL2Q86UN3 420 aa3.71□□□□□ -1.82
LINC00561-201ENST00000565815 PLCZ1Q86YW0 608 aa3.71□□□□□ -1.82
LINC00561-201ENST00000565815 KLHDC1Q8N7A1 406 aa3.71□□□□□ -1.82
LINC00561-201ENST00000565815 CLDN22Q8N7P3 220 aa3.71□□□□□ -1.82
LINC00561-201ENST00000565815 NPEPL1Q8NDH3 523 aa3.71□□□□□ -1.82
LINC00561-201ENST00000565815 OR4C15Q8NGM1 316 aa3.71□□□□□ -1.82
LINC00561-201ENST00000565815 OR6F1Q8NGZ6 308 aa3.71□□□□□ -1.82
LINC00561-201ENST00000565815 GOT1L1Q8NHS2 421 aaPredicted RBP3.71□□□□□ -1.82
LINC00561-201ENST00000565815 APH1BQ8WW43 257 aa3.71□□□□□ -1.82
LINC00561-201ENST00000565815 GEMIN6Q8WXD5 167 aaKnown RBP3.71□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms