RNA–Protein interactions for RNA: ENST00000565442.1

CHD9-215, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 2

Gene CHD9, Length 703 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-215ENST00000565442 FAM47DPA6NHR8 397 aa2.87□□□□□ -1.95
CHD9-215ENST00000565442 LAD1O00515 517 aa2.87□□□□□ -1.95
CHD9-215ENST00000565442 PES1O00541 588 aaKnown RBP2.87□□□□□ -1.95
CHD9-215ENST00000565442 SUPT3HO75486 399 aa2.87□□□□□ -1.95
CHD9-215ENST00000565442 SLC25A27O95847 323 aa2.87□□□□□ -1.95
CHD9-215ENST00000565442 NDUFB10O96000 172 aa2.87□□□□□ -1.95
CHD9-215ENST00000565442 IFNA8P32881 189 aa2.87□□□□□ -1.95
CHD9-215ENST00000565442 RORCP51449 518 aa2.87□□□□□ -1.95
CHD9-215ENST00000565442 UCNP55089 124 aa2.87□□□□□ -1.95
CHD9-215ENST00000565442 AQP6Q13520 282 aa2.87□□□□□ -1.95
CHD9-215ENST00000565442 CAPRIN1Q14444 709 aaKnown RBP2.87□□□□□ -1.95
CHD9-215ENST00000565442 ZBED5Q49AG3 693 aa2.87□□□□□ -1.95
CHD9-215ENST00000565442 CCDC183Q5T5S1 534 aa2.87□□□□□ -1.95
CHD9-215ENST00000565442 C6orf120Q7Z4R8 191 aa2.87□□□□□ -1.95
CHD9-215ENST00000565442 CDR2LQ86X02 465 aaPredicted RBP2.87□□□□□ -1.95
CHD9-215ENST00000565442 PLPPR1Q8TBJ4 325 aa2.87□□□□□ -1.95
CHD9-215ENST00000565442 SLC2A14Q8TDB8 520 aa2.87□□□□□ -1.95
CHD9-215ENST00000565442 SH3GL1Q99961 368 aa2.87□□□□□ -1.95
CHD9-215ENST00000565442 DNTTIP1Q9H147 329 aa2.87□□□□□ -1.95
CHD9-215ENST00000565442 CDC42EP4Q9H3Q1 356 aaKnown RBP2.87□□□□□ -1.95
CHD9-215ENST00000565442 ZNF226Q9NYT6 803 aa2.87□□□□□ -1.95
CHD9-215ENST00000565442 PSMC3IPQ9P2W1 217 aaPredicted RBP2.87□□□□□ -1.95
CHD9-215ENST00000565442 CSDC2Q9Y534 153 aaKnown RBP2.87□□□□□ -1.95
CHD9-215ENST00000565442 IGHV3-64DA0A0J9YX35 117 aa2.86□□□□□ -1.95
CHD9-215ENST00000565442 A0A1B0GVI7 797 aa2.86□□□□□ -1.95
CHD9-215ENST00000565442 C11orf94C9JXX5 98 aa2.86□□□□□ -1.95
CHD9-215ENST00000565442 H3BNH8 94 aa2.86□□□□□ -1.95
CHD9-215ENST00000565442 TMX2-CTNND1H3BSU7 103 aa2.86□□□□□ -1.95
CHD9-215ENST00000565442 PEX7O00628 323 aa2.86□□□□□ -1.95
CHD9-215ENST00000565442 SOX15O60248 233 aa2.86□□□□□ -1.95
CHD9-215ENST00000565442 TNNI1P19237 187 aa2.86□□□□□ -1.95
CHD9-215ENST00000565442 SMARCB1Q12824 385 aa2.86□□□□□ -1.95
CHD9-215ENST00000565442 ARHGAP19Q14CB8 494 aa2.86□□□□□ -1.95
CHD9-215ENST00000565442 RSPO1Q2MKA7 263 aaPredicted RBP2.86□□□□□ -1.95
CHD9-215ENST00000565442 PIGGQ5H8A4 983 aa2.86□□□□□ -1.95
CHD9-215ENST00000565442 ZNF836Q6ZNA1 936 aa2.86□□□□□ -1.95
CHD9-215ENST00000565442 LINC00173Q6ZV60 143 aa2.86□□□□□ -1.95
CHD9-215ENST00000565442 NIPA1Q7RTP0 329 aa2.86□□□□□ -1.95
CHD9-215ENST00000565442 CAMK2N1Q7Z7J9 78 aa2.86□□□□□ -1.95
CHD9-215ENST00000565442 ENTHD1Q8IYW4 607 aa2.86□□□□□ -1.95
CHD9-215ENST00000565442 CNPY4Q8N129 248 aa2.86□□□□□ -1.95
CHD9-215ENST00000565442 Q8N9L7 120 aa2.86□□□□□ -1.95
CHD9-215ENST00000565442 HSD17B11Q8NBQ5 300 aa2.86□□□□□ -1.95
CHD9-215ENST00000565442 GEMIN6Q8WXD5 167 aaKnown RBP2.86□□□□□ -1.95
CHD9-215ENST00000565442 SRSF12Q8WXF0 261 aaKnown RBP2.86□□□□□ -1.95
CHD9-215ENST00000565442 AURKBQ96GD4 344 aaPredicted RBP2.86□□□□□ -1.95
CHD9-215ENST00000565442 KCTD14Q9BQ13 255 aaPredicted RBP2.86□□□□□ -1.95
CHD9-215ENST00000565442 ECSITQ9BQ95 431 aa2.86□□□□□ -1.95
CHD9-215ENST00000565442 GABARAPL3Q9BY60 117 aa2.86□□□□□ -1.95
CHD9-215ENST00000565442 DMAP1Q9NPF5 467 aaPredicted RBP2.86□□□□□ -1.95
CHD9-215ENST00000565442 CTPS2Q9NRF8 586 aa2.86□□□□□ -1.95
CHD9-215ENST00000565442 INPP5EQ9NRR6 644 aa2.86□□□□□ -1.95
CHD9-215ENST00000565442 STOX2Q9P2F5 926 aaPredicted RBP2.86□□□□□ -1.95
CHD9-215ENST00000565442 F11RQ9Y624 299 aaKnown RBP2.86□□□□□ -1.95
CHD9-215ENST00000565442 CIB4A0PJX0 185 aa2.85□□□□□ -1.95
CHD9-215ENST00000565442 PRSS37A4D1T9 235 aa2.85□□□□□ -1.95
CHD9-215ENST00000565442 TRIM64CA6NLI5 447 aa2.85□□□□□ -1.95
CHD9-215ENST00000565442 ZNF726A6NNF4 738 aa2.85□□□□□ -1.95
CHD9-215ENST00000565442 CIB2O75838 187 aa2.85□□□□□ -1.95
CHD9-215ENST00000565442 FGGP02679 453 aa2.85□□□□□ -1.95
CHD9-215ENST00000565442 IGHV3-43DP0DP04 118 aa2.85□□□□□ -1.95
CHD9-215ENST00000565442 ZNF30P17039 623 aa2.85□□□□□ -1.95
CHD9-215ENST00000565442 CDKN1BP46527 198 aa2.85□□□□□ -1.95
CHD9-215ENST00000565442 CCR8P51685 355 aa2.85□□□□□ -1.95
CHD9-215ENST00000565442 SUCLG1P53597 346 aaKnown RBP2.85□□□□□ -1.95
CHD9-215ENST00000565442 RPS21P63220 83 aaKnown RBP2.85□□□□□ -1.95
CHD9-215ENST00000565442 MRPS22P82650 360 aaKnown RBP2.85□□□□□ -1.95
CHD9-215ENST00000565442 TMEM183BQ1AE95 376 aa2.85□□□□□ -1.95
CHD9-215ENST00000565442 Q6P435 159 aa2.85□□□□□ -1.95
CHD9-215ENST00000565442 TMEM107Q6UX40 140 aa2.85□□□□□ -1.95
CHD9-215ENST00000565442 ZYG11AQ6WRX3 759 aa2.85□□□□□ -1.95
CHD9-215ENST00000565442 TMEM183AQ8IXX5 376 aa2.85□□□□□ -1.95
CHD9-215ENST00000565442 DUSP18Q8NEJ0 188 aa2.85□□□□□ -1.95
CHD9-215ENST00000565442 MARCH1Q8TCQ1 289 aa2.85□□□□□ -1.95
CHD9-215ENST00000565442 RNF139Q8WU17 664 aa2.85□□□□□ -1.95
CHD9-215ENST00000565442 TMEM54Q969K7 222 aa2.85□□□□□ -1.95
CHD9-215ENST00000565442 FAM104AQ969W3 186 aa2.85□□□□□ -1.95
CHD9-215ENST00000565442 LRRC58Q96CX6 371 aa2.85□□□□□ -1.95
CHD9-215ENST00000565442 ASB9Q96DX5 294 aa2.85□□□□□ -1.95
CHD9-215ENST00000565442 CNDP1Q96KN2 507 aa2.85□□□□□ -1.95
CHD9-215ENST00000565442 FAM210BQ96KR6 192 aa2.85□□□□□ -1.95
CHD9-215ENST00000565442 SDHCQ99643 169 aaPredicted RBP2.85□□□□□ -1.95
CHD9-215ENST00000565442 PLA2G2FQ9BZM2 168 aa2.85□□□□□ -1.95
CHD9-215ENST00000565442 MTCL1Q9Y4B5 1905 aaKnown RBP2.84□□□□□ -1.95
CHD9-215ENST00000565442 IGKV6D-21A0A0A0MT36 114 aa2.84□□□□□ -1.95
CHD9-215ENST00000565442 HEATR9A2RTY3 570 aa2.84□□□□□ -1.95
CHD9-215ENST00000565442 GOLGA8OA6NCC3 632 aa2.84□□□□□ -1.95
CHD9-215ENST00000565442 ZNF716A6NP11 495 aa2.84□□□□□ -1.95
CHD9-215ENST00000565442 GOLGA8NF8WBI6 632 aa2.84□□□□□ -1.95
CHD9-215ENST00000565442 AP3B1O00203 1094 aa2.84□□□□□ -1.95
CHD9-215ENST00000565442 DYNC1I1O14576 645 aa2.84□□□□□ -1.95
CHD9-215ENST00000565442 XKRYO14609 159 aa2.84□□□□□ -1.95
CHD9-215ENST00000565442 SS18L1O75177 396 aaPredicted RBP2.84□□□□□ -1.95
CHD9-215ENST00000565442 EIF3GO75821 320 aaKnown RBP eCLIP2.84□□□□□ -1.95
CHD9-215ENST00000565442 IGLV2-23P01705 113 aa2.84□□□□□ -1.95
CHD9-215ENST00000565442 HOXC4P09017 264 aaPredicted RBP2.84□□□□□ -1.95
CHD9-215ENST00000565442 ZNF735P0CB33 412 aa2.84□□□□□ -1.95
CHD9-215ENST00000565442 GDI1P31150 447 aa2.84□□□□□ -1.95
CHD9-215ENST00000565442 HOXA9P31269 272 aa2.84□□□□□ -1.95
CHD9-215ENST00000565442 CXCL5P42830 114 aa2.84□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 68.9 ms