RNA–Protein interactions for RNA: ENST00000565274.5

CAPN3-214, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 734 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-214ENST00000565274 NICN1Q9BSH3 213 aa4.7□□□□□ -1.66
CAPN3-214ENST00000565274 H2AFJQ9BTM1 129 aa4.7□□□□□ -1.66
CAPN3-214ENST00000565274 CHRDL1Q9BU40 450 aa4.7□□□□□ -1.66
CAPN3-214ENST00000565274 FNDC11Q9BVV2 318 aa4.7□□□□□ -1.66
CAPN3-214ENST00000565274 GTPBP2Q9BX10 602 aaKnown RBP4.7□□□□□ -1.66
CAPN3-214ENST00000565274 TAPBPLQ9BX59 468 aa4.7□□□□□ -1.66
CAPN3-214ENST00000565274 VN1R3Q9BXE9 311 aa4.7□□□□□ -1.66
CAPN3-214ENST00000565274 STRADBQ9C0K7 418 aa4.7□□□□□ -1.66
CAPN3-214ENST00000565274 OR51E2Q9H255 320 aa4.7□□□□□ -1.66
CAPN3-214ENST00000565274 MTG2Q9H4K7 406 aa4.7□□□□□ -1.66
CAPN3-214ENST00000565274 ELOVL6Q9H5J4 265 aa4.7□□□□□ -1.66
CAPN3-214ENST00000565274 TMEM38AQ9H6F2 299 aa4.7□□□□□ -1.66
CAPN3-214ENST00000565274 GAREM1Q9H706 876 aa4.7□□□□□ -1.66
CAPN3-214ENST00000565274 WDR54Q9H977 334 aa4.7□□□□□ -1.66
CAPN3-214ENST00000565274 LYRM4Q9HD34 91 aa4.7□□□□□ -1.66
CAPN3-214ENST00000565274 MYNNQ9NPC7 610 aa4.7□□□□□ -1.66
CAPN3-214ENST00000565274 KRCC1Q9NPI7 259 aaPredicted RBP4.7□□□□□ -1.66
CAPN3-214ENST00000565274 DYRK4Q9NR20 520 aa4.7□□□□□ -1.66
CAPN3-214ENST00000565274 SIRT7Q9NRC8 400 aa4.7□□□□□ -1.66
CAPN3-214ENST00000565274 THSD1Q9NS62 852 aa4.7□□□□□ -1.66
CAPN3-214ENST00000565274 ACOXLQ9NUZ1 547 aa4.7□□□□□ -1.66
CAPN3-214ENST00000565274 GFOD1Q9NXC2 390 aa4.7□□□□□ -1.66
CAPN3-214ENST00000565274 CNOT2Q9NZN8 540 aaKnown RBP4.7□□□□□ -1.66
CAPN3-214ENST00000565274 VPS29Q9UBQ0 182 aa4.7□□□□□ -1.66
CAPN3-214ENST00000565274 MRM2Q9UI43 246 aaKnown RBP4.7□□□□□ -1.66
CAPN3-214ENST00000565274 MSRAQ9UJ68 235 aa4.7□□□□□ -1.66
CAPN3-214ENST00000565274 OR52A1Q9UKL2 312 aa4.7□□□□□ -1.66
CAPN3-214ENST00000565274 ZDHHC8Q9ULC8 765 aa4.7□□□□□ -1.66
CAPN3-214ENST00000565274 ABT1Q9ULW3 272 aaKnown RBP4.7□□□□□ -1.66
CAPN3-214ENST00000565274 WASF3Q9UPY6 502 aa4.7□□□□□ -1.66
CAPN3-214ENST00000565274 PPP1R3CQ9UQK1 317 aa4.7□□□□□ -1.66
CAPN3-214ENST00000565274 MRPS33Q9Y291 106 aaKnown RBP4.7□□□□□ -1.66
CAPN3-214ENST00000565274 YIPF1Q9Y548 306 aa4.7□□□□□ -1.66
CAPN3-214ENST00000565274 V9GYH0 126 aa4.7□□□□□ -1.66
CAPN3-214ENST00000565274 ZNF106Q9H2Y7 1883 aaKnown RBP4.7□□□□□ -1.66
CAPN3-214ENST00000565274 PCM1Q15154 2024 aa4.69□□□□□ -1.66
CAPN3-214ENST00000565274 TBC1D3KA0A087X1G2 549 aa4.69□□□□□ -1.66
CAPN3-214ENST00000565274 IQCMA0A1B0GVH7 501 aa4.69□□□□□ -1.66
CAPN3-214ENST00000565274 FAM240BA0A1B0GVZ2 78 aa4.69□□□□□ -1.66
CAPN3-214ENST00000565274 A0A1W2PQ45 241 aaPredicted RBP4.69□□□□□ -1.66
CAPN3-214ENST00000565274 A0A1W2PQY0 241 aa4.69□□□□□ -1.66
CAPN3-214ENST00000565274 LNP1A1A4G5 178 aa4.69□□□□□ -1.66
CAPN3-214ENST00000565274 C2orf78A6NCI8 922 aa4.69□□□□□ -1.66
CAPN3-214ENST00000565274 WIPF3A6NGB9 483 aa4.69□□□□□ -1.66
CAPN3-214ENST00000565274 TUBAL3A6NHL2 446 aa4.69□□□□□ -1.66
CAPN3-214ENST00000565274 FAM171A2A8MVW0 826 aa4.69□□□□□ -1.66
CAPN3-214ENST00000565274 FFAR3O14843 346 aa4.69□□□□□ -1.66
CAPN3-214ENST00000565274 GPR42O15529 346 aa4.69□□□□□ -1.66
CAPN3-214ENST00000565274 EMC8O43402 210 aa4.69□□□□□ -1.66
CAPN3-214ENST00000565274 SIGLEC6O43699 453 aa4.69□□□□□ -1.66
CAPN3-214ENST00000565274 EIF3GO75821 320 aaKnown RBP eCLIP4.69□□□□□ -1.66
CAPN3-214ENST00000565274 SOX30O94993 753 aa4.69□□□□□ -1.66
CAPN3-214ENST00000565274 CYB5R3P00387 301 aaPredicted RBP4.69□□□□□ -1.66
CAPN3-214ENST00000565274 PTHP01270 115 aa4.69□□□□□ -1.66
CAPN3-214ENST00000565274 ALPIP09923 528 aa4.69□□□□□ -1.66
CAPN3-214ENST00000565274 ACSM4P0C7M7 580 aa4.69□□□□□ -1.66
CAPN3-214ENST00000565274 UBCP0CG48 685 aaKnown RBP4.69□□□□□ -1.66
CAPN3-214ENST00000565274 PIPP12273 146 aaPredicted RBP4.69□□□□□ -1.66
CAPN3-214ENST00000565274 ATP1B2P14415 290 aaPredicted RBP4.69□□□□□ -1.66
CAPN3-214ENST00000565274 PAX1P15863 534 aa4.69□□□□□ -1.66
CAPN3-214ENST00000565274 ENGP17813 658 aa4.69□□□□□ -1.66
CAPN3-214ENST00000565274 IDSP22304 550 aa4.69□□□□□ -1.66
CAPN3-214ENST00000565274 FPR3P25089 353 aa4.69□□□□□ -1.66
CAPN3-214ENST00000565274 TACR1P25103 407 aa4.69□□□□□ -1.66
CAPN3-214ENST00000565274 EPHA2P29317 976 aa4.69□□□□□ -1.66
CAPN3-214ENST00000565274 SLC6A1P30531 599 aa4.69□□□□□ -1.66
CAPN3-214ENST00000565274 MTNR1AP48039 350 aa4.69□□□□□ -1.66
CAPN3-214ENST00000565274 GABRA4P48169 554 aa4.69□□□□□ -1.66
CAPN3-214ENST00000565274 RFX2P48378 723 aa4.69□□□□□ -1.66
CAPN3-214ENST00000565274 RGS6P49758 472 aa4.69□□□□□ -1.66
CAPN3-214ENST00000565274 MVDP53602 400 aa4.69□□□□□ -1.66
CAPN3-214ENST00000565274 CRYBA2P53672 197 aa4.69□□□□□ -1.66
CAPN3-214ENST00000565274 PFN3P60673 137 aa4.69□□□□□ -1.66
CAPN3-214ENST00000565274 SELENOWP63302 87 aa4.69□□□□□ -1.66
CAPN3-214ENST00000565274 CCL7P80098 99 aa4.69□□□□□ -1.66
CAPN3-214ENST00000565274 CDH18Q13634 790 aa4.69□□□□□ -1.66
CAPN3-214ENST00000565274 PDE7AQ13946 482 aa4.69□□□□□ -1.66
CAPN3-214ENST00000565274 ARHGEF7Q14155 803 aa4.69□□□□□ -1.66
CAPN3-214ENST00000565274 MPPED2Q15777 294 aa4.69□□□□□ -1.66
CAPN3-214ENST00000565274 EXT1Q16394 746 aa4.69□□□□□ -1.66
CAPN3-214ENST00000565274 ANKRD55Q3KP44 614 aa4.69□□□□□ -1.66
CAPN3-214ENST00000565274 ZNF658BQ4V348 819 aaPredicted RBP4.69□□□□□ -1.66
CAPN3-214ENST00000565274 IFI44LQ53G44 452 aa4.69□□□□□ -1.66
CAPN3-214ENST00000565274 SPIN4Q56A73 249 aa4.69□□□□□ -1.66
CAPN3-214ENST00000565274 CRB2Q5IJ48 1285 aa4.69□□□□□ -1.66
CAPN3-214ENST00000565274 NXNL2Q5VZ03 156 aa4.69□□□□□ -1.66
CAPN3-214ENST00000565274 OR4F3Q6IEY1 312 aa4.69□□□□□ -1.66
CAPN3-214ENST00000565274 LPCAT3Q6P1A2 487 aa4.69□□□□□ -1.66
CAPN3-214ENST00000565274 SLC27A4Q6P1M0 643 aa4.69□□□□□ -1.66
CAPN3-214ENST00000565274 DOK6Q6PKX4 331 aa4.69□□□□□ -1.66
CAPN3-214ENST00000565274 LINGO4Q6UY18 593 aa4.69□□□□□ -1.66
CAPN3-214ENST00000565274 RPTNQ6XPR3 784 aa4.69□□□□□ -1.66
CAPN3-214ENST00000565274 MBOAT1Q6ZNC8 495 aa4.69□□□□□ -1.66
CAPN3-214ENST00000565274 GDPGP1Q6ZNW5 385 aa4.69□□□□□ -1.66
CAPN3-214ENST00000565274 TSEN54Q7Z6J9 526 aaKnown RBP4.69□□□□□ -1.66
CAPN3-214ENST00000565274 NRARPQ7Z6K4 114 aa4.69□□□□□ -1.66
CAPN3-214ENST00000565274 TMEM173Q86WV6 379 aaPredicted RBP4.69□□□□□ -1.66
CAPN3-214ENST00000565274 NRMQ8IXM6 262 aa4.69□□□□□ -1.66
CAPN3-214ENST00000565274 GPALPP1Q8IXQ4 340 aa4.69□□□□□ -1.66
CAPN3-214ENST00000565274 RDH10Q8IZV5 341 aa4.69□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms