RNA–Protein interactions for RNA: ENST00000564540.5

UBR1-205, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 3

Gene UBR1, Length 735 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-205ENST00000564540 ROPN1BQ9BZX4 212 aaPredicted RBP2.44□□□□□ -2.02
UBR1-205ENST00000564540 FAM192AQ9GZU8 254 aa2.44□□□□□ -2.02
UBR1-205ENST00000564540 SGK2Q9HBY8 427 aa2.44□□□□□ -2.02
UBR1-205ENST00000564540 HOXC10Q9NYD6 342 aa2.44□□□□□ -2.02
UBR1-205ENST00000564540 KIAA1257Q9ULG3 409 aa2.44□□□□□ -2.02
UBR1-205ENST00000564540 NPIPA1Q9UND3 350 aa2.44□□□□□ -2.02
UBR1-205ENST00000564540 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP2.44□□□□□ -2.02
UBR1-205ENST00000564540 FRMPD3Q5JV73 1810 aa2.44□□□□□ -2.02
UBR1-205ENST00000564540 IGLV2-18A0A075B6J9 118 aa2.43□□□□□ -2.02
UBR1-205ENST00000564540 FAM240BA0A1B0GVZ2 78 aa2.43□□□□□ -2.02
UBR1-205ENST00000564540 SNTNA6NMZ2 147 aa2.43□□□□□ -2.02
UBR1-205ENST00000564540 UGT1A9O60656 530 aa2.43□□□□□ -2.02
UBR1-205ENST00000564540 DNAJB6O75190 326 aa2.43□□□□□ -2.02
UBR1-205ENST00000564540 ENTPD5O75356 428 aa2.43□□□□□ -2.02
UBR1-205ENST00000564540 DBTP11182 482 aaKnown RBP2.43□□□□□ -2.02
UBR1-205ENST00000564540 CCDC130P13994 396 aa2.43□□□□□ -2.02
UBR1-205ENST00000564540 POU2F1P14859 743 aa2.43□□□□□ -2.02
UBR1-205ENST00000564540 NCK1P16333 377 aa2.43□□□□□ -2.02
UBR1-205ENST00000564540 ABOP16442 354 aa2.43□□□□□ -2.02
UBR1-205ENST00000564540 TNNT2P45379 298 aaPredicted RBP2.43□□□□□ -2.02
UBR1-205ENST00000564540 CASP4P49662 377 aa2.43□□□□□ -2.02
UBR1-205ENST00000564540 NCBP1Q09161 790 aaKnown RBP2.43□□□□□ -2.02
UBR1-205ENST00000564540 GNMTQ14749 295 aa2.43□□□□□ -2.02
UBR1-205ENST00000564540 LRRC66Q68CR7 880 aa2.43□□□□□ -2.02
UBR1-205ENST00000564540 MOB3BQ86TA1 216 aa2.43□□□□□ -2.02
UBR1-205ENST00000564540 SLC38A6Q8IZM9 456 aa2.43□□□□□ -2.02
UBR1-205ENST00000564540 FAM86B1Q8N7N1 296 aa2.43□□□□□ -2.02
UBR1-205ENST00000564540 BBOF1Q8ND07 529 aa2.43□□□□□ -2.02
UBR1-205ENST00000564540 OR52K1Q8NGK4 314 aa2.43□□□□□ -2.02
UBR1-205ENST00000564540 ZFP90Q8TF47 636 aa2.43□□□□□ -2.02
UBR1-205ENST00000564540 PEX13Q92968 403 aa2.43□□□□□ -2.02
UBR1-205ENST00000564540 PELI1Q96FA3 418 aa2.43□□□□□ -2.02
UBR1-205ENST00000564540 SH3YL1Q96HL8 342 aaPredicted RBP2.43□□□□□ -2.02
UBR1-205ENST00000564540 AMDHD1Q96NU7 426 aa2.43□□□□□ -2.02
UBR1-205ENST00000564540 TGM7Q96PF1 710 aa2.43□□□□□ -2.02
UBR1-205ENST00000564540 ACTR6Q9GZN1 396 aa2.43□□□□□ -2.02
UBR1-205ENST00000564540 EXO5Q9H790 373 aa2.43□□□□□ -2.02
UBR1-205ENST00000564540 SIRT7Q9NRC8 400 aa2.43□□□□□ -2.02
UBR1-205ENST00000564540 IL36GQ9NZH8 169 aa2.43□□□□□ -2.02
UBR1-205ENST00000564540 SPATA7Q9P0W8 599 aa2.43□□□□□ -2.02
UBR1-205ENST00000564540 SEC14L3Q9UDX4 400 aa2.43□□□□□ -2.02
UBR1-205ENST00000564540 PISDQ9UG56 409 aa2.43□□□□□ -2.02
UBR1-205ENST00000564540 SUN2Q9UH99 717 aa2.43□□□□□ -2.02
UBR1-205ENST00000564540 PCSK1NQ9UHG2 260 aa2.43□□□□□ -2.02
UBR1-205ENST00000564540 PCYOX1Q9UHG3 505 aa2.43□□□□□ -2.02
UBR1-205ENST00000564540 PIGLQ9Y2B2 252 aa2.43□□□□□ -2.02
UBR1-205ENST00000564540 KANK1Q14678 1352 aa2.42□□□□□ -2.02
UBR1-205ENST00000564540 BTBD17A6NE02 478 aa2.42□□□□□ -2.02
UBR1-205ENST00000564540 TIMM8AO60220 97 aaPredicted RBP2.42□□□□□ -2.02
UBR1-205ENST00000564540 RBBP9O75884 186 aa2.42□□□□□ -2.02
UBR1-205ENST00000564540 AGTP01019 485 aa2.42□□□□□ -2.02
UBR1-205ENST00000564540 POLR2MP0CAP2 368 aa2.42□□□□□ -2.02
UBR1-205ENST00000564540 STAG3L3P0CL85 134 aa2.42□□□□□ -2.02
UBR1-205ENST00000564540 MX1P20591 662 aa2.42□□□□□ -2.02
UBR1-205ENST00000564540 MAGEA8P43361 318 aa2.42□□□□□ -2.02
UBR1-205ENST00000564540 CCT3P49368 545 aaKnown RBP2.42□□□□□ -2.02
UBR1-205ENST00000564540 PKNOX1P55347 436 aa2.42□□□□□ -2.02
UBR1-205ENST00000564540 SSX2Q16385 188 aa2.42□□□□□ -2.02
UBR1-205ENST00000564540 DPYSL2Q16555 572 aa2.42□□□□□ -2.02
UBR1-205ENST00000564540 HADHQ16836 314 aaKnown RBP2.42□□□□□ -2.02
UBR1-205ENST00000564540 KRTAP21-2Q3LI59 83 aa2.42□□□□□ -2.02
UBR1-205ENST00000564540 KRTAP13-2Q52LG2 175 aa2.42□□□□□ -2.02
UBR1-205ENST00000564540 CTSL3PQ5NE16 218 aa2.42□□□□□ -2.02
UBR1-205ENST00000564540 SAMD4BQ5PRF9 694 aaKnown RBP2.42□□□□□ -2.02
UBR1-205ENST00000564540 MARCH8Q5T0T0 291 aa2.42□□□□□ -2.02
UBR1-205ENST00000564540 BIVMQ86UB2 503 aa2.42□□□□□ -2.02
UBR1-205ENST00000564540 OFCC1Q8IZS5 231 aa2.42□□□□□ -2.02
UBR1-205ENST00000564540 CLEC4FQ8N1N0 589 aa2.42□□□□□ -2.02
UBR1-205ENST00000564540 ZNF321PQ8N8H1 164 aa2.42□□□□□ -2.02
UBR1-205ENST00000564540 OR4D5Q8NGN0 318 aa2.42□□□□□ -2.02
UBR1-205ENST00000564540 ITCHQ96J02 903 aa2.42□□□□□ -2.02
UBR1-205ENST00000564540 BMFQ96LC9 184 aa2.42□□□□□ -2.02
UBR1-205ENST00000564540 MTG1Q9BT17 334 aaPredicted RBP2.42□□□□□ -2.02
UBR1-205ENST00000564540 FANCEQ9HB96 536 aa2.42□□□□□ -2.02
UBR1-205ENST00000564540 ZNF639Q9UID6 485 aa2.42□□□□□ -2.02
UBR1-205ENST00000564540 ADAM28Q9UKQ2 775 aa2.42□□□□□ -2.02
UBR1-205ENST00000564540 MEMO1Q9Y316 297 aa2.42□□□□□ -2.02
UBR1-205ENST00000564540 IGSF9BQ9UPX0 1349 aa2.42□□□□□ -2.02
UBR1-205ENST00000564540 HEATR9A2RTY3 570 aa2.41□□□□□ -2.02
UBR1-205ENST00000564540 PCP4L1A6NKN8 68 aa2.41□□□□□ -2.02
UBR1-205ENST00000564540 WRBO00258 174 aa2.41□□□□□ -2.02
UBR1-205ENST00000564540 TAPBPO15533 448 aa2.41□□□□□ -2.02
UBR1-205ENST00000564540 PFKFB2O60825 505 aa2.41□□□□□ -2.02
UBR1-205ENST00000564540 UPK3AO75631 287 aa2.41□□□□□ -2.02
UBR1-205ENST00000564540 TSPAN12O95859 305 aa2.41□□□□□ -2.02
UBR1-205ENST00000564540 IGHG4P01861 327 aa2.41□□□□□ -2.02
UBR1-205ENST00000564540 TLX1NBP0CAT3 122 aa2.41□□□□□ -2.02
UBR1-205ENST00000564540 CNR1P21554 472 aa2.41□□□□□ -2.02
UBR1-205ENST00000564540 P2RY1P47900 373 aa2.41□□□□□ -2.02
UBR1-205ENST00000564540 UBE2AP49459 152 aa2.41□□□□□ -2.02
UBR1-205ENST00000564540 GPM6AP51674 278 aa2.41□□□□□ -2.02
UBR1-205ENST00000564540 EIF3EP60228 445 aaKnown RBP2.41□□□□□ -2.02
UBR1-205ENST00000564540 SMARCB1Q12824 385 aa2.41□□□□□ -2.02
UBR1-205ENST00000564540 CYTH1Q15438 398 aa2.41□□□□□ -2.02
UBR1-205ENST00000564540 SLC15A2Q16348 729 aa2.41□□□□□ -2.02
UBR1-205ENST00000564540 GUCA2BQ16661 112 aa2.41□□□□□ -2.02
UBR1-205ENST00000564540 MICBQ29980 383 aa2.41□□□□□ -2.02
UBR1-205ENST00000564540 CHRFAM7AQ494W8 412 aa2.41□□□□□ -2.02
UBR1-205ENST00000564540 XKR4Q5GH76 650 aa2.41□□□□□ -2.02
UBR1-205ENST00000564540 PDZK1Q5T2W1 519 aa2.41□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms